Philippe Grieu

Ecosystem function enhanced by combining four functional types of plant species in intensively managed grassland mixtures: a 3‐year continental‐scale field experiment

1.A coordinated continental-scale field experiment across 31 sites was used to compare the biomass yield of monocultures and four species mixtures associated with intensively managed agricultural grassland systems. To increase complementarity in resource use, each of the four species in the experimental design represented a distinct functional type derived from two levels of each of two functional traits, nitrogen acquisition (N2-fixing legume or nonfixing grass) crossed with temporal development (fast-establishing or temporally persistent). Relative abundances of the four functional types in mixtures were systematically varied at sowing to vary the evenness of the same four species in mixture communities at each site and sown at two levels of seed density. 2.Across multiple years, the total yield (including weed biomass) of the mixtures exceeded that of the average monoculture in >97% of comparisons. It also exceeded that of the best monoculture (transgressive overyielding) in about 60% of sites, with a mean yield ratio of mixture to best-performing monoculture of 1·07 across all sites. Analyses based on yield of sown species only (excluding weed biomass) demonstrated considerably greater transgressive overyielding (significant at about 70% of sites, ratio of mixture to best-performing monoculture = 1·18). 3.Mixtures maintained a resistance to weed invasion over at least 3 years. In mixtures, median values indicate

A Gene-Phenotype Network Based on Genetic Variability for Drought Responses Reveals Key Physiological Processes in Controlled and Natural Environments

Identifying the connections between molecular and physiological processes underlying the diversity of drought stress responses in plants is key for basic and applied science. Drought stress response involves a large number of molecular pathways and subsequent physiological processes. Therefore, it constitutes an archetypical systems biology model. We first inferred a gene-phenotype network exploiting differences in drought responses of eight sunflower (Helianthus annuus) genotypes to two drought stress scenarios. Large transcriptomic data were obtained with the sunflower Affymetrix microarray, comprising 32423 probesets, and were associated to nine morpho-physiological traits (integrated transpired water, leaf transpiration rate, osmotic potential, relative water content, leaf mass per area, carbon isotope discrimination, plant height, number of leaves and collar diameter) using sPLS regression. Overall, we could associate the expression patterns of 1263 probesets to six phenotypic traits and identify if correlations were due to treatment, genotype and/or their interaction. We also identified genes whose expression is affected at moderate and/or intense drought stress together with genes whose expression variation could explain phenotypic and drought tolerance variability among our genetic material. We then used the network model to study phenotypic changes in less tractable agronomical conditions, i.e. sunflower hybrids subjected to different watering regimes in field trials. Mapping this new dataset in the gene-phenotype network allowed us to identify genes whose expression was robustly affected by water deprivation in both controlled and field conditions. The enrichment in genes correlated to relative water content and osmotic potential provides evidence of the importance of these traits in agronomical conditions.

Genetic Control of Water Use Efficiency and Leaf Carbon Isotope Discrimination in Sunflower (Helianthus annuus L.) Subjected to Two Drought Scenarios

High water use efficiency (WUE) can be achieved by coordination of biomass accumulation and water consumption. WUE is physiologically and genetically linked to carbon isotope discrimination (CID) in leaves of plants. A population of 148 recombinant inbred lines (RILs) of sunflower derived from a cross between XRQ and PSC8 lines was studied to identify quantitative trait loci (QTL) controlling WUE and CID, and to compare QTL associated with these traits in different drought scenarios. We conducted greenhouse experiments in 2011 and 2012 by using 100 balances which provided a daily measurement of water transpired, and we determined WUE, CID, biomass and cumulative water transpired by plants. Wide phenotypic variability, significant genotypic effects, and significant negative correlations between WUE and CID were observed in both experiments. A total of nine QTL controlling WUE and eight controlling CID were identified across the two experiments. A QTL for phenotypic response controlling WUE and CID was also significantly identified. The QTL for WUE were specific to the drought scenarios, whereas the QTL for CID were independent of the drought scenarios and could be found in all the experiments. Our results showed that the stable genomic regions controlling CID were located on the linkage groups 06 and 13 (LG06 and LG13). Three QTL for CID were co-localized with the QTL for WUE, biomass and cumulative water transpired. We found that CID and WUE are highly correlated and have common genetic control. Interestingly, the genetic control of these traits showed an interaction with the environment (between the two drought scenarios and control conditions). Our results open a way for breeding higher WUE by using CID and marker-assisted approaches and therefore help to maintain the stability of sunflower crop production.

The Agrodiversity Experiment: three years of data from a multisite study in intensively managed grasslands

Kirwan, L., Connolly, J., Brophy, C., Baadshaug, O. H., Belanger, G., Black, A., Carnus, T., Collins, R. P., Cop, J., Delgado, I., De Vliegher, A., Elgersma, A., Frankow-Lindberg, B. E., Golinski, P., Grieu, P., Gustavsson, A., Helgadottir, A., Hoglind, M., Huguenin-elie, O., Jorgensen, M., Kadziuliene, Z., Lunnan, T., Luscher, A., Kurki, P., Porqueddu, C., Sebastia, M. T., Thumm, U., Walmsley, D. & Finn, J. A. (2014). The Agrodiversity Experiment: three years of data from a multisite study in intensively managed grasslands. Ecology, 95 (9), [2680]

The Agrodiversity Experiment: three years of data from a multisite study in intensively managed grasslands Ecological Archives

Kirwan, L., Connolly, J., Brophy, C., Baadshaug, O. H., Belanger, G., Black, A., Carnus, T., Collins, R. P., Cop, J., Delgado, I., De Vliegher, A., Elgersma, A., Frankow-Lindberg, B. E., Golinski, P., Grieu, P., Gustavsson, A., Helgadottir, A., Hoglind, M., Huguenin-elie, O., Jorgensen, M., Kadziuliene, Z., Lunnan, T., Luscher, A., Kurki, P., Porqueddu, C., Sebastia, M. T., Thumm, U., Walmsley, D. & Finn, J. A. (2014). The Agrodiversity Experiment: three years of data from a multisite study in intensively managed grasslands. Ecology, 95 (9), [2680]

Hydraulic conductivity and contribution of aquaporins to water uptake in roots of four sunflower genotypes

BackgroundThis article evaluates the potential of intraspecific variation for whole-root hydraulic properties in sunflower. We investigated genotypic differences related to root water transport in four genotypes selected because of their differing water use efficiency (JAC doi: 10.1111/jac.12079. 2014). We used a pressure-flux approach to characterize hydraulic conductance (L0) which reflects the overall water uptake capacity of the roots and hydraulic conductivity (Lpr) which represents the root intrinsic water permeability on an area basis. The contribution of aquaporins (AQPs) to water uptake was explored using mercuric chloride (HgCl2), a general AQP blocker.ResultsThere were considerable variations in root morphology between genotypes. Mean values of L0 and Lpr showed significant variation (above 60% in both cases) between recombinant inbred lines in control plants. Pressure-induced sap flow was strongly inhibited by HgCl2 treatment in all genotypes (more than 50%) and contribution of AQPs to hydraulic conductivity varied between genotypes. Treated root systems displayed markedly different L0 values between genotypes whereas Lpr values were similar.ConclusionsOur analysis points to marked differences between genotypes in the intrinsic aquaporin-dependent path (Lpr in control plants) but not in the intrinsic AQP-independent paths (Lpr in HgCl2 treated plants). Overall, root anatomy was a major determinant of water transport properties of the whole organ and can compensate for a low AQP contribution. Hydraulic properties of root tissues and organs might have to be taken into account for plant breeding since they appear to play a key role in sunflower water balance and water use efficiency.

Genetic Analysis of the Transpiration Control in Sunflower (Helianthus Annuus L) Subjected to Drought

Stomatal control of transpiration was implied as the major strategies by which plants cope with water stress. Here we did investigate the genetic control of this process using the following trait: Fraction of Transpirable Soil Water threshold (FTSWt) representing the threshold of soil water content at which the stomatal control of transpiration started. We conducted a progressive water deficit experiment using recombinant inbred lines (RILs) of sunflower and we analyzed the variation of FTSWt. Quantitative trait loci (QTL) mapping was then performed to determine the loci involved and to identify the genetic control. This work has shown, for the first time, QTL mapping for FTSWt in crops. In this work QTL mapping was made in sunflower.