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Dive into the research topics where Phillip N. Dean is active.

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Featured researches published by Phillip N. Dean.


Cell Proliferation | 1984

Cell-Cycle Analysis Using A Monoclonal Antibody to Brdurd

Phillip N. Dean; Frank Dolbeare; Howard G. Gratzner; Glenn C. Rice; Joe W. Gray

The flow cytometric measurement of DNA distributions of cells has many applications in biomedical research. Phase fractions estimated (calculated) from such distributions are used to study the growth characteristics of various types of cells, particularly when the cells have been exposed to perturbing agents such as chemotherapeutic drugs. For more than 10 years many methods for resolving DNA distributions into the three cell subpopulations (G1, S and G2, + M) have been reported in the literature. A new method of analysis utilizing a monoclonal antibody to bromodeoxyuridine (BrdUrd) has been developed (Gratzner, 1982; Dolbeare et al., 1983) which makes it possible in most cases to accurately determine phase fractions without resorting to mathematical models. the procedure involves the incorporation of BrdUrd by growing (DNA synthesizing) S phase cells, labelling the BrdUrd with a fluorescent monoclonal antibody, and the bivariate measurement of the antibody and of total DNA content, the latter through propidium‐iodide staining. the resulting bivariate distributions clearly and simply resolve the three subpopulations. This paper describes the method and illustrates its use in the analysis of various fractions of elutriated exponentially growing Chinese hamster ovary (CHO) cells.


Cell Proliferation | 1980

A SIMPLIFIED METHOD OF DNA DISTRIBUTION ANALYSIS

Phillip N. Dean

Current methods of analysing DNA distributions utilize complex mathematical expressions that require the use of large non‐linear curve fitting methods and, consequently, large computers. This paper presents a new method of analysing DNA distributions of asynchronously growing or mildly perturbed cells. The S phase fraction is obtained by fitting a second degree polynomial to that part of the distribution, mid S phase, which is not influenced by either the G1 or the G2+ M peaks. The method is simple and fast, it exceeds the accuracy of other methods and it can be used on a large desk calculator or mini‐computer.


Cell Proliferation | 1982

A comparison of mathematical methods for the analysis of DNA histograms obtained by flow cytometry

Heinz Baisch; H.-P. Beck; I. J. Christensen; N. R. Hartmann; Jerrold Fried; Phillip N. Dean; Joe W. Gray; J. H. Jett; D. A. Johnston; R. A. White; Claudio Nicolini; S. Zeitz; J. V. Watson

Abstract. Twelve methods for analysing FCM‐histograms were compared using the same set of data. Some of the histograms that were analysed were simulated by computer and some were taken from experiments. Simulated data were generated assuming asynchronously growing cell populations and (i) measurement coefficients of variation (CV) from 2 to 16%; (ii) constant measurement CV or CVs increasing from G1 to G2 phase, and (iii) varying fractions of cells in each phase. Simulated data were also generated assuming synchronous cell populations in which a block in early S phase was applied and released. DNA histograms were measured for L‐929 cells at various times after mitotic selection. Labelling indices were also measured for these cells at the same time.


Journal of Histochemistry and Cytochemistry | 1977

Measurement of mammalian sperm deoxyribonucleic acid by flow cytometry. Problems and approaches.

M. A. Van Dilla; Barton L. Gledhill; Suzanne Lake; Phillip N. Dean; Joe W. Gray; V Kachel; Barthel Barlogie; W. Göhde

Measurement of mammalian sperm deoxyribonucleic acid content is of importance in several areas of biomedical research. When measured in flow systems with orthogonal axes of illumination, flow and detection, an unexpected, distorted distribution consisting of a narrow peak with a lateral extension to the right is observed. Several lines of evidence lead to the conclusion that this effect is an optical-geometric artifact attributable to the flat shape and high index of refraction of mammalian sperm heads. This artifact disappears when an epiillumination flow system is used in which the optic axes for illumination and detection and the flow axis are all coincident. Other approaches also eliminate the artifact. The resulting coefficients of variation observed after acriflavine-Feulgen staining are 4-5%, short of the goal of 1.5% required to distinguish between human sperm bearing X and Y chromosomes and to develop a mutagen test system using mice.


Cytometry | 1997

Biosafety guidelines for sorting of unfixed cells

Ingrid Schmid; Janet K. A. Nicholson; Janis V. Giorgi; George Janossy; Annalisa Kunkl; Peter A. Lopez; Stephen P. Perfetto; Larry C. Seamer; Phillip N. Dean

The International Society of Analytical Cytology (ISAC) Biohazard Working Group presents guidelines for sorting of unfixed cells, including known biohazardous samples, using jet-in-air, deflected-droplet cell sorters. There is a risk that personnel operating these instruments could become exposed to droplets and aerosols containing biological agents present in the samples. The following guidelines can aid in the prevention of exposures of laboratory personnel to pathogens contained in the sort samples. The document provides biosafety recommendations for sample handling, operator training and protection, laboratory facility design, and instrument setup and maintenance. In addition, it describes in detail methods for assessment of instrument aerosol containment. Recommendations provided here may also help laboratories to obtain institutional and/or regulatory agency approval for sorting of unfixed and known biohazardous samples.


Journal of Histochemistry and Cytochemistry | 1979

Flow cytometry of mammalian sperm progress in DNA and morphology measurement

D. Pinkel; Phillip N. Dean; Suzanne Lake; D. Peters; M. L. Mendelsohn; Joe W. Gray; M. A. Van Dilla; Barton L. Gledhill

Variability in DNA content and head shape of mammalian sperm are potentially useful markers for flow cytometric monitoring of genetic damage in spermatogenic cells. The high refractive index and extreme flatness of the sperm heads produce an optical effect which interferes with DNA measurements in flow cytometers which have dye excitation and fluorescence light collection normal to the axis of flow. Orientation of sperm in flow controls this effect and results in coefficients of variation of 2.5% and 4.2%, respectively, for DNA measurements of mouse and human sperm. Alternatively, the optical effect can be used to generate shape-related information. Measurements on randomly oriented sperm from three mammalian species using a pair of fluorescence detectors indicate that large shape differences are detectable. Acriflavine-Feulgen stained sperm nuclei are significantly bleached during flow cytometric measurements at power levels routinely used in many flow cytometers. Dual beam studies of this phenomenon indicate it may be useful in detecting abnormally shaped sperm.


Journal of Histochemistry and Cytochemistry | 1979

A study of acid phosphatase and dipeptidyl aminopeptidase II in monodispersed anterior pituitary cells using flow cytometry and electron microscopy.

Robert E. Smith; Phillip N. Dean

A brief historical review of cytoenzymology is presented from the time of introduction into electron microscopy to the present, where the direction for quantification of an enzyme in single cells appears most promising by fluorescent staining. First attempts are reported to quantitate acid phosphatase (AcPase) and dipeptidyl aminopeptidase II (DAP-II) in monodispersed anterior pituitary cells from lactating and postlactating rats by flow cytometry, fluorescent, and electron microscopy. 3-Hydroxy-flavone is introduced as a new fluorescent cytochemical stain for AcPase, useful in flow cytometry but of only limited use in fluorescent microscopy. Histograms for AcPase indicate a single peak of cells staining more intensely in cell preparations from postlactating over lactating animals. Histograms for DAP-II staining indicate two distinct populations of cells present in the lactating and only one in the postlactating rat anterior pituitary gland. The application of dual laser staining indicates that not all cells stain for both enzymes. Electron microscopy shows the subcellular localization of DAP-II to be limited to lytic bodies and in mammotrophic cells to some secretion granules.


Journal of Histochemistry and Cytochemistry | 1979

INVESTIGATIONS IN HIGH-PRECISION SORTING.

J T Merrill; Phillip N. Dean; Joe W. Gray

We have investigated the accuracy with which droplets containing cells can be sorted individually onto known and thus relocatable positions. The presence and random arrival of cells and particles in the sorter jet disturbs the orderly production and deflection of droplets, causing a dispersion of sorted droplet trajectories. The magnitude of this dispersion is a function of the phase relationship between the arrival of a cell at the end of the jet and the droplet formation. Using a modified Becton Dickinson Fluorescence-Activated Cell Sorter, we selected for sorting only those droplets that formed with a cell near the center of the droplet. We used this technique to sort Lewis lung tumor cells. The dispersion of droplet positions was reduced from over 3% to about 1% of an average deflection of typically 15 mm for a nozzle with a 50-micron diameter orifice. Sorting onto a surface such as magnetic tape or a microscope slide introduces another uncertainty in position because the cell may be located anywhere within the wetted radius of the droplet on the slide. Sorting onto less-wettable surfaces reduces the wetted radius and thus the variation in cell position.


Chromosoma | 1981

DNA and histone synthesis rate change during the S-period in Ehrlich ascites tumor cells.

David P. Bloch; Chi-Tseh Fu; Phillip N. Dean

Data from flow-cytometric analysis of DNA of Ehrlich ascites tumor cells were fitted using non-linear least squares curve fitting routines. Analysis of rates of synthesis from the derived S-period profiles revealed a pattern of changing rates of DNA synthesis during the S-period. Three main peaks are seen whose trough to through periods range from 0 to 16%, 16 to 65%, 65 to 100% of the DNA synthesized during S. The differences between the peak rates and rates in the intervening troughs are small, about 10% of the maximum, but these occur reproducibly. Some differences in the DNA distribution profiles, hence rate profiles, can be seen among samples taken at different times during the day. These are thought to reflect the effects of circadian rhythms, but they are not large enough to obscure the general pattern of rate shifts that occur during the S-period. Analyses of radioactivity of 3H-thymidine pulse labelled cells, sorted across the S-period, were in accord with the results obtained from the DNA distributions. A parallel analysis of DNA and histones showed a correspondence in the timing and direction of shifts in rate for both during the middle part of the S-period.


Cytometry | 1997

Introduction to the biosafety guidelines for sorting of unfixed cells

Ingrid Schmid; Phillip N. Dean

Cell sorting of biologic specimens by flow cytometry has become a widely used technique in research and clinical laboratories. Because viable biologic specimens can contain infectious agents, precautions need to be taken to prevent the exposure of operators of flow cytometers to biohazards arising from the use of these instruments. The International Society of Analytical Cytology (ISAC) recognized the need for establishing guidelines for sorting of unfixed cells and initiated the formation of a Biohazard Working Group, which has produced a set of recommendations that can aid in preventing such exposures. The guidelines contain recommendations on 1) sample handling, 2) training and protection of operators, 3) laboratory design, 4) cell sorter setup and maintenance, and 5) testing the instrument for the efficiency of aerosol containment. Cytometry 28:97–98, 1997.

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D. Peters

Lawrence Livermore National Laboratory

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M. A. Van Dilla

Lawrence Livermore National Laboratory

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Barton L. Gledhill

Lawrence Livermore National Laboratory

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D. Pinkel

Lawrence Livermore National Laboratory

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Ingrid Schmid

University of Texas MD Anderson Cancer Center

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Suzanne Lake

Lawrence Livermore National Laboratory

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B. Trask

Lawrence Livermore National Laboratory

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Frank Dolbeare

Lawrence Livermore National Laboratory

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G. van den Engh

Lawrence Livermore National Laboratory

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