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Dive into the research topics where R. Dean Grubbs is active.

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Featured researches published by R. Dean Grubbs.


Fisheries | 2005

Is the collapse of shark populations in the Northwest Atlantic Ocean and Gulf of Mexico real

George H. Burgess; Lawrence R. Beerkircher; Gregor M. Cailliet; John K. Carlson; Enris Cortés; Kenneth J. Goldman; R. Dean Grubbs; John A. Musick; Michael K. Musyl; Colin A. Simpfendorfer

Abstract Increasing fishing pressure on sharks stocks over recent decades has resulted in declines of many populations and led to increasing concerns for their conservation. The extent of these declines, however, has been highly variable—the result of the level of fishing, ocean conditions, and the life history of individual species. Two recent articles have described the collapse and possible extirpation of shark populations in the northwest Atlantic Ocean and Gulf of Mexico. Herein, we examine the results of these two papers commenting on the data sets used, comparing them to other available data sets, and critically evaluating the analyses and conclusions. We argue that these conclusions have been overstated because: (1) the analyses were based on a limited number of data sets, (2) the data sets themselves are inadequate to describe the status of all shark populations in the northwest Atlantic Ocean and Gulf of Mexico reported in these studies, (3) available data sets that could produce different concl...


Environmental Biology of Fishes | 2006

Assessment of multiple paternity in single litters from three species of carcharhinid sharks in Hawaii

Toby S. Daly-Engel; R. Dean Grubbs; Kim N. Holland; Robert J. Toonen; Brian W. Bowen

We tested for presence or absence of multiple paternity in single litters from each of three congeneric shark species in Hawaii: the sandbar shark, Carcharhinus plumbeus, bignose shark, Carcharhinus altimus, and Galapagos shark, Carcharhinus galapagensis. Based on eight polymorphic microsatellite loci, we excluded paternity by a single sire in sandbar and bignose sharks, but could not exclude a single sire for the litter from the Galapagos shark. This study doubles the number of shark species tested for multiple paternity, and is the first demonstration of multiple paternity in sandbar and bignose sharks.


Scientific Reports | 2016

Critical assessment and ramifications of a purported marine trophic cascade

R. Dean Grubbs; John K. Carlson; Jason G. Romine; Tobey H. Curtis; W. David McElroy; Camilla T. McCandless; Charles F. Cotton; John A. Musick

When identifying potential trophic cascades, it is important to clearly establish the trophic linkages between predators and prey with respect to temporal abundance, demographics, distribution, and diet. In the northwest Atlantic Ocean, the depletion of large coastal sharks was thought to trigger a trophic cascade whereby predation release resulted in increased cownose ray abundance, which then caused increased predation on and subsequent collapse of commercial bivalve stocks. These claims were used to justify the development of a predator-control fishery for cownose rays, the “Save the Bay, Eat a Ray” fishery, to reduce predation on commercial bivalves. A reexamination of data suggests declines in large coastal sharks did not coincide with purported rapid increases in cownose ray abundance. Likewise, the increase in cownose ray abundance did not coincide with declines in commercial bivalves. The lack of temporal correlations coupled with published diet data suggest the purported trophic cascade is lacking the empirical linkages required of a trophic cascade. Furthermore, the life history parameters of cownose rays suggest they have low reproductive potential and their populations are incapable of rapid increases. Hypothesized trophic cascades should be closely scrutinized as spurious conclusions may negatively influence conservation and management decisions.


Journal of Shellfish Research | 2011

Cownose Ray (Rhinoptera bonasus) Predation Relative to Bivalve Ontogeny

Robert A. Fisher; Garrett C. Call; R. Dean Grubbs

ABSTRACT The purpose of this study was to determine the ability of the cownose ray, Rhinoptera bonasus (Mitchill, 1815), to manipulate oysters and clams, to test for relative prey preference, and to investigate whether susceptibility to cownose ray predation changes with bivalve ontogeny. We investigated patterns of predation for captive adult and young-of-year cownose rays on 4 species of bivalves, including Crassostrea virginica (Gmelin, 1791), Crassostrea ariakensis (Fujita, 1913), Mercenaria mercenaria (Linnaeus, 1758), and Mya arenaria Linnaeus, 1758. In oyster (C. virginica) trials, predation probabilities by adult rays were highest at shell heights of 30–70 mm and shell depths of 8–22 mm. The rates of predation by adult rays in trials in which samesize oysters were used were higher than rates in most comingled trials. Adult rays showed no differences in predation between native oysters (C. virginica) and nonnative oysters (C. ariakensis; P > 0.05). Adult rays selected hard- and soft-shell clams (Manly-Chesson index M. mercenaria, &agr; = 0.736 ± 0.002, electivity = 0.473 ± 0.007; M. arenaria, &agr; = 0.742 ± 0.003, electivity = 0.485 ± 0.013) over oysters (C. virginica, &agr; = 0.263 ± 0.002, electivity = -0.473 ± 0.007; &agr; = 0.257 ± 0.003, electivity = -0.485 ± 0.003). In young-of-year feeding trials, oysters with a shell height of 10–35 mm and a shell depth of 3–12 mm had the highest probability of predation. Native oyster and hard clam peak force or load crush tests resulted in forces of 200–1,500 N and 400–1,400 N across shell depths of 10–35 mm and 21–34 mm, respectively, before valve failure. The results of this study indicate that cownose ray predation on shellfish is limited by shell size and is likely related to ray jaw gape and bite force.


Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science | 2013

Age, Growth, and Reproductive Biology of Cownose Rays in Chesapeake Bay

Robert A. Fisher; Garrett C. Call; R. Dean Grubbs

Abstract The Cownose Ray Rhinoptera bonasus is an opportunistic predator of benthic invertebrates and has had a long history of negative interactions with commercial shellfish industries. Most recently, Cownose Rays have been implicated in negatively affecting the recovery of bay scallop Argopecten irradians stocks in North Carolina and oyster restoration and commercial aquaculture efforts in Chesapeake Bay. A mitigation attempt to decrease predation on shellfish has resulted in an unregulated fishery for Cownose Rays. Cownose Ray life history suggests that they are highly susceptible to overexploitation. We determined age, growth, and size at maturity for Cownose Rays collected in Chesapeake Bay. In total, 694 rays were used for the study: 246 males ranging in size from 30.0 to 98.0 cm disc width (DW) and 448 females ranging from 30.0 to 110.5 cm DW. The oldest individual observed was a female (107 cm DW) estimated at age 21. Our data suggested that Cownose Rays grow considerably faster during the first few years than has been previously reported, thus producing higher estimates of the growth coefficient k. The best-fit growth models (three-parameter von Bertalanffy models) estimated k-values of 0.2741 for males and 0.1931 for females. The large sample size and inclusion ofmany older animals (n = 119 rays over age 10) resulted in theoreticalmaximum size estimates that matched the observed sizes well. The median size at 50% maturity was 85–86 cm DW for males and females (corresponding to ages of ∼6–7 for males and ∼7–8 for females). Fecundity in Cownose Rays was typically one embryo per mature female, with a gestation period of 11–12 months. Our study confirms that the Cownose Ray is a K-selected species with late maturity, long gestation, and low reproductive potential, indicating that it could be highly susceptible to overexploitation.


Marine and Freshwater Research | 2011

Age, growth and reproduction of a common deep-water shark, shortspine spurdog (Squalus cf. mitsukurii), from Hawaiian waters

Charles F. Cotton; R. Dean Grubbs; Toby S. Daly-Engel; Patrick D. Lynch; John A. Musick

Abouthalfoftheextantsharkspeciesoccuronlyindeepwaters(definedas.200mdepth),yetfewpublished studies on sharks include these taxa. As fisheries worldwide enter deeper waters, the provision of biological data for these little-known taxa is critical to management and conservation. The shortspine spurdog, Squalus cf. mitsukurii ,i s an abundant shark on the insular slopes of the Hawaiian Islands. We assigned ages by counting growth bands on the enamel capsofbothdorsalfinspines.Ageestimatesrangedfrom3to26yearsforfemalesandfrom6to23yearsformales.Growth wasmodelledwithmultiplelength-at-agemodels,fittedusingmaximumlikelihoodestimationandnonlinearleast-squares methods.Forfemaledata,thelogisticmodelyieldedthemostbiologicallycogentparameterestimates(LN ¼126cm(total length, TL) and k ¼0.080 year � 1 ). The two-parameter von Bertalanffy Growth Model yielded optimal model fit and realistic parameter estimates for males (LN ¼72cm (TL) and k ¼0.080 year � 1 ). Maturity ogives suggested that females and males matureat 64-cmTL (15years) and47-cm TL (8.5years), respectively. Fecundity ranged from 3to 10embryos; mating appeared to be aseasonal. We reveal a conservative life history, common among deep-water elasmobranchs, and provide further evidence of geographic variation in reproductive and growth parameters in this nominal species.


Environmental Biology of Fishes | 2015

Distribution and community structure of coastal sharks in the northeastern Gulf of Mexico

Dana M. Bethea; Matthew J. Ajemian; John K. Carlson; Eric R. Hoffmayer; Johanna L. Imhoff; R. Dean Grubbs; Cheston T. Peterson; George H. Burgess

Coastal shark abundance and community structure was quantified across 10 geographic areas in the northeastern Gulf of Mexico using fishery-independent gillnet data from 2003 to 2011. A total of 3,205 sets were made in which 14,244 carcharhiniform sharks, primarily juveniles, were caught comprising 11 species from three families. The three most abundant species, Atlantic sharpnose Rhizoprionodon terraenovae, bonnethead Sphyrna tiburo and blacktip sharks Carcharhinus limbatus, were consistently captured over all sampling sites regardless of environmental conditions; however, some species (e.g., bull C. leucas, blacknose C. acrontous, finetooth C. isodon, and sandbar sharks C. plumbeus) were restricted to a specific area or a range of areas. Two-way crossed analysis of similarity (ANOSIM) found geographic area to significantly influence shark species-life stage assemblages while season did not. Resemblance matrices between environmental data and shark community assemblage found the two were weakly but significantly correlated, with the combination of salinity and water clarity producing the highest Spearman rank correlation value. Species diversity varied by geographic area, but was generally highest in areas with the greatest amount of fresh and saltwater fluctuations. Our results suggest that estuarine conditions adjacent to river mouths may affect juvenile shark assemblages across similar latitudes and some areas of the northeastern Gulf of Mexico may be considered important nursery areas for select shark species. This study provides important insight into the habitat use of a variety of coastal shark species and can be used to better manage these species through the determination of critical habitat.


Journal of Anatomy | 2015

Feeding biomechanics of the cownose ray, Rhinoptera bonasus, over ontogeny

Matthew A. Kolmann; Daniel R. Huber; Philip J. Motta; R. Dean Grubbs

Growth affects the performance of structure, so the pattern of growth must influence the role of a structure and an organism. Because animal performance is linked to morphological specialization, ontogenetic change in size may influence an organisms biological role. High bite force generation is presumably selected for in durophagous taxa. Therefore, these animals provide an excellent study system for investigating biomechanical consequences of growth on performance. An ontogenetic series of 27 cownose rays (Rhinoptera bonasus) were dissected in order to develop a biomechanical model of the feeding mechanism, which was then compared with bite forces measured from live rays. Mechanical advantage of the feeding apparatus was generally conserved throughout ontogeny, while an increase in the mass and cross‐sectional area of the jaw adductors resulted in allometric gains in bite force generation. Of primary importance to forceful biting in this taxon is the use of a fibrocartilaginous tendon associated with the insertion of the primary jaw adductor division. This tendon may serve to redirect muscle forces anteriorly, transmitting them within the plane of biting. Measured bite forces obtained through electrostimulation of the jaw adductors in live rays were higher than predicted, possibly due to differences in specific tension of actual batoid muscle and that used in the model. Mass‐specific bite forces in these rays are the highest recorded for elasmobranchs. Cownose rays exemplify a species that, through allometric growth of bite performance and morphological novelties, have expanded their ecological performance over ontogeny.


Frontiers in Marine Science | 2017

Philopatry and Regional Connectivity of the Great Hammerhead Shark, Sphyrna mokarran in the U.S. and Bahamas

Tristan L. Guttridge; Maurits P. M. Van Zinnicq Bergmann; Chris Bolte; Lucy A. Howey; Jean S. Finger; Steven T. Kessel; Jill L. Brooks; William Winram; Mark E. Bond; Lance K. B. Jordan; Rachael C. Cashman; Emily R. Tolentino; R. Dean Grubbs; Samuel H. Gruber

A thorough understanding of movement patterns of a species is critical for designing effective conservation and management initiatives. However, generating such information for large marine vertebrates is challenging, as they typically move over long distances, live in concealing environments, are logistically difficult to capture and, as upper-trophic predators, are naturally low in abundance. As a large bodied, broadly distributed tropical shark typically restricted to coastal and shelf habitats, the great hammerhead shark Sphyrna mokarran epitomizes such challenges. Highly valued for its fins, it suffers high bycatch mortality coupled with conservative fecundity, and as a result, is vulnerable to over-exploitation and population depletion. Although there is very little species specific data available, the absence of recent catch records give cause to suspect substantial declines across its range. Here, we used biotelemetry techniques (acoustic and satellite), conventional tagging, laser-photogrammetry, and photo-identification to investigate; the level of site fidelity, and or residency for great hammerheads to coastal areas in the Bahamas and U.S. and the extent of movements and connectivity of great hammerheads between the U.S. and Bahamas. Results revealed large scale return migrations (3030 km), seasonal residency to local areas (some for 5 months), site fidelity (annual return to Bimini and Jupiter for many individuals) and numerous international movements. These findings enhance the understanding of movement ecology of the great hammerhead shark and have the potential to contribute to improved conservation and management.


Molecular Phylogenetics and Evolution | 2016

Depth as a driver of evolution in the deep sea: Insights from grenadiers (Gadiformes: Macrouridae) of the genus Coryphaenoides

Michelle R. Gaither; Biagio Violi; Howard Gray; Francis Neat; Jeffrey C. Drazen; R. Dean Grubbs; Adela Roa-Varón; Tracey Sutton; A. Rus Hoelzel

Here we consider the role of depth as a driver of evolution in a genus of deep-sea fishes. We provide a phylogeny for the genus Coryphaenoides (Gadiformes: Macrouridae) that represents the breadth of habitat use and distributions for these species. In our consensus phylogeny species found at abyssal depths (>4000m) form a well-supported lineage, which interestingly also includes two non-abyssal species, C. striaturus and C. murrayi, diverging from the basal node of that lineage. Biogeographic analyses suggest the genus may have originated in the Southern and Pacific Oceans where contemporary species diversity is highest. The abyssal lineage seems to have arisen secondarily and likely originated in the Southern/Pacific Oceans but diversification of this lineage occurred in the Northern Atlantic Ocean. All abyssal species are found in the North Atlantic with the exception of C. yaquinae in the North Pacific and C. filicauda in the Southern Ocean. Abyssal species tend to have broad depth ranges and wide distributions, indicating that the stability of the deep oceans and the ability to live across wide depths may promote population connectivity and facilitate large ranges. We also confirm that morphologically defined subgenera do not agree with our phylogeny and that the Giant grenadier (formerly Albatrossia pectoralis) belongs to Coryphaenoides, indicating that a taxonomic revision of the genus is needed. We discuss the implications of our findings for understanding the radiation and diversification of this genus, and the likely role of adaptation to the abyss.

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John A. Musick

Virginia Institute of Marine Science

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John K. Carlson

National Marine Fisheries Service

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Toby S. Daly-Engel

Florida Institute of Technology

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George H. Burgess

Florida Museum of Natural History

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Dana M. Bethea

National Oceanic and Atmospheric Administration

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Emily R. Tolentino

Florida International University

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