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Dive into the research topics where Rachel M. Chalmers is active.

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Featured researches published by Rachel M. Chalmers.


Lancet Infectious Diseases | 2015

A review of the global burden, novel diagnostics, therapeutics, and vaccine targets for cryptosporidium

William Checkley; A. Clinton White; Devan Jaganath; Michael J. Arrowood; Rachel M. Chalmers; Xian Ming Chen; Ronald Fayer; Jeffrey K. Griffiths; Richard L. Guerrant; Lizbeth Hedstrom; Christopher D. Huston; Karen L. Kotloff; Gagandeep Kang; Jan R. Mead; Mark A. Miller; William A. Petri; Jeffrey W. Priest; David S. Roos; Boris Striepen; R.C. Andrew Thompson; H. Ward; Wesley A. Van Voorhis; Lihua Xiao; Guan Zhu; Eric R. Houpt

Cryptosporidium spp are well recognised as causes of diarrhoeal disease during waterborne epidemics and in immunocompromised hosts. Studies have also drawn attention to an underestimated global burden and suggest major gaps in optimum diagnosis, treatment, and immunisation. Cryptosporidiosis is increasingly identified as an important cause of morbidity and mortality worldwide. Studies in low-resource settings and high-income countries have confirmed the importance of cryptosporidium as a cause of diarrhoea and childhood malnutrition. Diagnostic tests for cryptosporidium infection are suboptimum, necessitating specialised tests that are often insensitive. Antigen-detection and PCR improve sensitivity, and multiplexed antigen detection and molecular assays are underused. Therapy has some effect in healthy hosts and no proven efficacy in patients with AIDS. Use of cryptosporidium genomes has helped to identify promising therapeutic targets, and drugs are in development, but methods to assess the efficacy in vitro and in animals are not well standardised. Partial immunity after exposure suggests the potential for successful vaccines, and several are in development; however, surrogates of protection are not well defined. Improved methods for propagation and genetic manipulation of the organism would be significant advances.


Emerging Infectious Diseases | 2002

Three Drinking- Water-Associated Cryptosporidiosis Outbreaks, Northern Ireland

Scott Glaberman; John E. Moore; Colm J. Lowery; Rachel M. Chalmers; Irshad M. Sulaiman; Kristin Elwin; Paul J. Rooney; Beverley C. Millar; James Dooley; Altaf A. Lal; Lihua Xiao

Three recent drinking-water–associated cryptosporidiosis outbreaks in Northern Ireland were investigated by using genotyping and subgenotyping tools. One Cryptosporidium parvum outbreak was caused by the bovine genotype, and two were caused by the human genotype. Subgenotyping analyses indicate that two predominant subgenotypes were associated with these outbreaks and had been circulating in the community.


Emerging Infectious Diseases | 2004

Sporadic Cryptosporidiosis Case- Control Study with Genotyping

Paul R. Hunter; Sara Hughes; Sarah Woodhouse; Qutub Syed; Neville Q. Verlander; Rachel M. Chalmers; K. L. Morgan; Gordon Nichols; Nicholas J. Beeching; Keith Osborn

Risk factors for Cryptosporidiosis in United Kingdom.


Experimental Parasitology | 2010

Minireview: Clinical cryptosporidiosis

Rachel M. Chalmers; Angharad P. Davies

Cryptosporidium has emerged as an important cause of diarrhoeal illness worldwide, especially amongst young children and patients with immune deficiencies. Usually presenting as a gastro-enteritis-like syndrome, disease ranges in seriousness from mild to severe and signs and symptoms depend on the site of infection, nutritional and immune status of the host, and parasite-related factors. Sources and routes of transmission are multiple, involving both zoonotic and anthroponotic spread, and facilitated by the resistance of the parasite to many commonly used disinfectants. Prevention and control measures are important for the protection of vulnerable groups since treatment options are limited. This review covers the life cycle, pathogenesis, clinical presentations, diagnosis, prevention and management of cryptosporidiosis in humans.


Clinical Microbiology Reviews | 2013

Cryptosporidium Pathogenicity and Virulence

Maha Bouzid; Paul R. Hunter; Rachel M. Chalmers; Kevin M. Tyler

SUMMARY Cryptosporidium is a protozoan parasite of medical and veterinary importance that causes gastroenteritis in a variety of vertebrate hosts. Several studies have reported different degrees of pathogenicity and virulence among Cryptosporidium species and isolates of the same species as well as evidence of variation in host susceptibility to infection. The identification and validation of Cryptosporidium virulence factors have been hindered by the renowned difficulties pertaining to the in vitro culture and genetic manipulation of this parasite. Nevertheless, substantial progress has been made in identifying putative virulence factors for Cryptosporidium. This progress has been accelerated since the publication of the Cryptosporidium parvum and C. hominis genomes, with the characterization of over 25 putative virulence factors identified by using a variety of immunological and molecular techniques and which are proposed to be involved in aspects of host-pathogen interactions from adhesion and locomotion to invasion and proliferation. Progress has also been made in the contribution of host factors that are associated with variations in both the severity and risk of infection. Here we provide a review comprised of the current state of knowledge on Cryptosporidium infectivity, pathogenesis, and transmissibility in light of our contemporary understanding of microbial virulence.


Applied and Environmental Microbiology | 2008

Cryptosporidium Genotypes and Subtypes in Lambs and Goat Kids in Spain

Joaquín Quílez; Eucaris Torres; Rachel M. Chalmers; Stephen J. Hadfield; Emilio del Cacho; Caridad Sánchez-Acedo

ABSTRACT To provide information on the transmission dynamics of cryptosporidial infections in domestic small ruminants and the potential role of sheep and goats as a source for human cryptosporidiosis, Cryptosporidium-positive isolates from 137 diarrheic lambs and 17 goat kids younger than 21 days of age were examined by using genotyping and subtyping techniques. Fecal specimens were collected between 2004 and 2006 from 71 sheep and 7 goat farms distributed throughout Aragón (northeastern Spain). Cryptosporidium parvum was the only species identified by restriction analyses of PCR products from small-subunit rRNA genes from all 154 microscopy-positive isolates and the sequencing of a subset of 50 isolates. Sequence analyses of the glycoprotein (GP60) gene revealed extensive genetic diversity within the C. parvum strains in a limited geographical area, in which the isolates from lambs exhibited 11 subtypes in two subtype families (IId and IIa) and those from goat kids displayed four subtypes within the family IId. Most isolates (98%) belonged to the subtype family IId, whereas only three isolates belonged to the most widely distributed family, IIa. Three of the four most prevalent subtypes (IIdA17G1a, IIdA19G1, and IIdA18G1) were previously identified in humans, and five subtypes (IIdA14G1, IIdA15G1, IIdA24G1, IIdA25G1, and IIdA26G1) were novel subtypes. All IId subtypes were identical to each other in the nonrepeat region, except for subtypes IIdA17G1b and IIdA22G1, which differed by a single nucleotide polymorphism downstream of the trinucleotide repeats. These findings suggest that lambs and goat kids are an important reservoir of the zoonotic C. parvum subtype family IId for humans.


Equine Veterinary Journal | 1991

The prevalence of enteric pathogens in diarrhoeic Thoroughbred foals in Britain and Ireland

Glenn F. Browning; Rachel M. Chalmers; D. R. Snodgrass; Roger M. Batt; C. A. Hart; S. E. Ormarod; D. Leadon; Sarah J. Stoneham

Summary A survey of 77 normal and 326 diarrhoeic foals in Britain and Ireland from 1987 to 1989 revealed a significantly higher prevalence of Group A rotaviruses and Aeromonas hydrophila in diarrhoeic foals. The prevalence of cryptosporidia, potentially pathogenic Escherichia coli, Yersinia enterocolitica and Clostridium perfringens was similar in normal or diarrhoeic foals. Rotaviruses had a similar prevalence in all age groups of scouring foals up to three months of age, with an overall prevalence of 37 per cent among diarrhoeic foals. The number of cases of diarrhoea varied considerably from year to year, but in all three years of the survey rotavirus was a significant pathogen. A comparison of diagnostic tests for rotavirus in the faeces showed electron microscopy (EM) and polyacrylamide gel electrophoresis (PAGE) to have similar sensitivity. The Rotazyme ELISA test kit was found to have the same sensitivity as a combination of EM and PAGE. A. hydrophila had an overall prevalence of 9 per cent among diarrhoeic foals, although its prevalence was higher in some age groups. A. hydrophila has not been established previously as a significant enteric pathogen in foals. Other putative pathogens found at very low prevalence were coronavirus, the putative picobirnavirus, Campylobacter spp. and Salmonella spp. No evidence was found of synergistic effects between rotavirus, cryptosporidia and potentially pathogenic E. coli. Neither coccidia nor non‐Group A rotaviruses were found in any of the samples examined.


Emerging Infectious Diseases | 2009

Cryptosporidium sp. rabbit genotype, a newly identified human pathogen.

Rachel M. Chalmers; Guy Robinson; Kristin Elwin; Stephen J. Hadfield; Lihua Xiao; Una Ryan; Deborah Modha; Catherine Mallaghan

Most human cases of cryptosporidiosis are caused by Cryptosporidium parvum or C. hominis, but pathogenicity of some unusual Cryptosporidium species/genotypes is uncertain (1). In July 2008, an outbreak caused by Cryptosporidium rabbit genotype was linked to consumption of tap water in Northamptonshire, England (2). On June 23 and 24, Cryptosporidium oocysts were detected by operational monitoring of treated water at a surface water treatment works. A precautionary boil-water notice was implemented on June 25.


Veterinary Parasitology | 2003

Long-term study of Cryptosporidium prevalence on a lowland farm in the United Kingdom

Anthony P. Sturdee; A.T. Bodley-Tickell; A. Archer; Rachel M. Chalmers

A longitudinal sample survey testing for Cryptosporidium in livestock and small wild mammals conducted over 6 years (1992-1997) on a lowland farm in Warwickshire, England, has shown the parasite to be endemic and persistently present in all mammalian categories. Faecal samples were taken throughout the year and oocysts concentrated by a formal ether sedimentation method for detection by immunofluorescence staining using a commercially available genus specific monoclonal antibody. Cryptosporidium parvum was identified by morphology and measurement of modified Ziehl-Neelsen stained oocysts. C. muris was rarely found in wild mammals and C. andersoni oocysts were never detected in livestock. Faecal samples from 3721 individuals gave cumulative 6-year prevalences for C. parvum as follows: bull beef, 3.6%; dairy cows, 3.5%; ewes, 6.4%; horses, 8.9%; calves (home bred), 52%; calves (bought-in) 23.2%; lambs, 12.9%; small wild mammals (rodents) living in and around farm buildings, 32.8%; small wild mammals (mainly rodents) living in areas of pasture, 29.9%. Animal categories with the highest prevalences also shed the highest average oocyst numbers per gram of faeces (ranging from 1.4 x 10(3) for bull beef to 1.1 x 10(5) for calves). Analysis of annual and seasonal data for each animal category revealed that patterns of infection were variable and sporadic; this means that short-term sampling was never likely to provide a true or representative picture. Seasonally combined data for adult livestock, young livestock and small wild mammals showed all three categories tended to have the highest Cryptosporidium prevalences in the autumn. Calves were separated from their dams within 24h of birth and yet showed high prevalence of infection in most years despite the low prevalence for the dairy herd. It is possible the coincidence of high autumn prevalence in mice with the main period for the rearing of calves contributed to the infection of the latter. The farming estate was used to teach students of agriculture and took pride in good land management and husbandry practices that produced well fed and healthy livestock. The data from this estate may represent, therefore, the baseline, the lowest possible levels to be expected, for Cryptosporidium infection and oocyst production on a lowland farm in the United Kingdom.


Emerging Infectious Diseases | 2008

Unusual Cryptosporidium Genotypes in Human Cases of Diarrhea

Guy Robinson; Kristin Elwin; Rachel M. Chalmers

Several Cryptosporidium spp. are known to infect humans, but most cases of illness are caused by Cryptosporidium hominis or C. parvum. During a long-term genotyping in the United Kingdom, we identified 3 unusual Cryptosporidium genotypes (skunk, horse, and rabbit) in human patients with diarrhea.

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Paul R. Hunter

University of East Anglia

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Lihua Xiao

Centers for Disease Control and Prevention

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M. Giles

Veterinary Laboratories Agency

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Gordon Nichols

Health Protection Agency

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Simone M. Cacciò

Istituto Superiore di Sanità

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Iain R. Lake

University of East Anglia

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Flo Harrison

University of East Anglia

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Kevin M. Tyler

University of East Anglia

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