Rachel Palmer
Harvard University
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Publication
Featured researches published by Rachel Palmer.
Cell | 1999
Sean Bong Lee; Karen Huang; Rachel Palmer; Vivi Truong; Doris Herzlinger; Kathryn Ann Kolquist; Jenise C. Wong; Charles Paulding; Seung Kew Yoon; William L. Gerald; Jonathan D Oliner; Daniel A. Haber
WT1 encodes a zinc finger transcription factor implicated in kidney differentiation and tumorigenesis. In reporter assays, WT1 represses transcription from GC- and TC-rich promoters, but its physiological targets remain uncertain. We used hybridization to high-density oligonucleotide arrays to search for native genes whose expression is altered following inducible expression of WT1. The major target of WT1 was amphiregulin, a member of the epidermal growth factor family. The WT1(-KTS) isoform binds directly to the amphiregulin promoter, resulting in potent transcriptional activation. The in vivo expression profile of amphiregulin during fetal kidney development mirrors the highly specific pattern of WT1 itself, and recombinant Amphiregulin stimulates epithelial branching in organ cultures of embryonic mouse kidney. These observations suggest a model for WT1 as a transcriptional regulator during kidney differentiation.
Current Biology | 2001
Rachel Palmer; Angeliki Kotsianti; Brian Cadman; Theonia K. Boyd; William L. Gerald; Daniel A. Haber
The WT1 tumor suppressor gene encodes a zinc finger transcription factor expressed in differentiating glomerular podocytes. Complete inactivation of WT1 in the mouse leads to failure of mesenchymal induction and renal agenesis, an early developmental phenotype that prevents analysis of subsequent stages in glomerular differentiation [1]. In humans with Denys-Drash Syndrome, a heterozygous germline mutation in WT1 is associated with specific defects in glomeruli and an increased risk for developing Wilms Tumor [2,3]. WT1 target genes implicated in cell cycle regulation and cellular proliferation have been proposed [4], but the link between WT1 function and glomerular differentiation is unexplained. Here, we show that inducible expression of WT1 in rat embryonic kidney cell precursors leads to the induction of endogenous Podocalyxin, the major structural membrane protein of glomerular podocytes, which is implicated in the maintenance of filtration slits. Binding of WT1 to conserved elements within the Podocalyxin gene promoter results in potent transcriptional activation, and the specific expression pattern of Podocalyxin in the developing kidney mirrors that of WT1 itself. These observations support a role for WT1 in the specific activation of a glomerular differentiation program in renal precursors and provide a molecular basis for the glomerulonephropathy that is characteristic of Denys-Drash Syndrome.
Nature Genetics | 2004
Hong Zhang; Gromoslaw A. Smolen; Rachel Palmer; Andrea Christoforou; Sander van den Heuvel; Daniel A. Haber
Post-translational modification of proteins by the ubiquitin-like molecule SUMO (sumoylation) regulates their subcellular localization and affects their functional properties in vitro, but the physiological function of sumoylation in multicellular organisms is largely unknown. Here, we show that the C. elegans Polycomb group (PcG) protein SOP-2 interacts with the SUMO-conjugating enzyme UBC-9 through its evolutionarily conserved SAM domain. Sumoylation of SOP-2 is required for its localization to nuclear bodies in vivo and for its physiological repression of Hox genes. Global disruption of sumoylation phenocopies a sop-2 mutation by causing ectopic Hox gene expression and homeotic transformations. Chimeric constructs in which the SOP-2 SAM domain is replaced with that derived from fruit fly or mammalian PcG proteins, but not those in which the SOP-2 SAM domain is replaced with the SAM domains of non-PcG proteins, confer appropriate in vivo nuclear localization and Hox gene repression. These observations indicate that sumoylation of PcG proteins, modulated by their evolutionarily conserved SAM domain, is essential to their physiological repression of Hox genes.
Current Biology | 2003
Hong Zhang; Rachel Palmer; Xiaobo Gao; Jordan A. Kreidberg; William L. Gerald; Li-Li Hsiao; Roderick V. Jensen; Steven R. Gullans; Daniel A. Haber
Stromal-epithelial interactions play an important role in renal organogenesis. Expression of the forkhead/winged helix transcription factor FoxD1 (BF-2) is restricted to stromal cells in the embryonic renal cortex, but it mediates its effects on the adjacent ureteric bud and metanephric mesenchyme, which fail to grow and differentiate in BF-2 null mice. BF-2 is therefore likely to regulate transcription of factors secreted by stromal cells that modulate the differentiation of neighboring epithelial cells. Here, we used cells with inducible expression of BF-2, combined with microarray analysis, to identify Placental Growth Factor (PlGF), a Vascular Endothelial Growth Factor (VEGF) family member previously implicated in angiogenesis, as a downstream target of BF-2. BF-2 binds to a conserved HNF3beta site in the PlGF promoter and activates transcription. PlGF is precisely coexpressed with BF-2, both temporally and spatially, within the developing renal stroma, and it is completely absent in BF-2 null kidney stroma. Addition of PlGF to in vitro kidney organ cultures stimulates branching of the ureteric bud. Our observations indicate that PlGF is a direct and physiologically relevant transcriptional target of BF-2. The contribution of PlGF toward stromal signals that regulate epithelial differentiation suggests novel functions for a growth factor previously implicated in reactive angiogenesis.
Cancer Cell | 2002
Rachel Palmer; Sean Bong Lee; Jenise C. Wong; Paul A. Reynolds; Hong Zhang; Vivi Truong; Jonathan D Oliner; William L. Gerald; Daniel A. Haber
Genes & Development | 2003
Paul A. Reynolds; Gromoslaw A. Smolen; Rachel Palmer; Dennis C. Sgroi; Vijay Yajnik; William L. Gerald; Daniel A. Haber
Journal of Biological Chemistry | 2001
Weihong Wang; Sean Bong Lee; Rachel Palmer; Leif W. Ellisen; Daniel A. Haber
European Journal of Cell Biology | 2001
Leif W. Ellisen; Rachel Palmer; Robert G. Maki; Vivi Truong; Pablo Tamayo; Jonathan D Oliner; Daniel A. Haber
Gene Expression Patterns | 2005
James A. Lorenzen; Benedetta Bonacci; Rachel Palmer; Clive Wells; Jian Zhang; Daniel A. Haber; Allan M. Goldstein; Alan N. Mayer
Journal of Pediatric Gastroenterology and Nutrition | 2005
James A. Lorenzen; Benedatta Bonacci; Rachel Palmer; Clive Wells; Jian Zhang; Daniel A. Haber; Allan M. Goldstein; Alan M Mayer