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Dive into the research topics where Ralph Brandenberger is active.

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Featured researches published by Ralph Brandenberger.


Nature Biotechnology | 2010

Synthetic peptide-acrylate surfaces for long-term self-renewal and cardiomyocyte differentiation of human embryonic stem cells

Zara Melkoumian; Jennifer L. Weber; David M. Weber; Andrei Gennadyevich Fadeev; Yue Zhou; Paula Dolley-Sonneville; Jiwei Yang; Liqun Qiu; Catherine A. Priest; Christopher Bankole Shogbon; Arthur Winston Martin; Jodelle Karen Nelson; Peter West; James Beltzer; Santona Pal; Ralph Brandenberger

Human embryonic stem cells (hESCs) have two properties of interest for the development of cell therapies: self-renewal and the potential to differentiate into all major lineages of somatic cells in the human body. Widespread clinical application of hESC-derived cells will require culture methods that are low-cost, robust, scalable and use chemically defined raw materials. Here we describe synthetic peptide-acrylate surfaces (PAS) that support self-renewal of hESCs in chemically defined, xeno-free medium. H1 and H7 hESCs were successfully maintained on PAS for over ten passages. Cell morphology and phenotypic marker expression were similar for cells cultured on PAS or Matrigel. Cells on PAS retained normal karyotype and pluripotency and were able to differentiate to functional cardiomyocytes on PAS. Finally, PAS were scaled up to large culture-vessel formats. Synthetic, xeno-free, scalable surfaces that support the self-renewal and differentiation of hESCs will be useful for both research purposes and development of cell therapies.


Nature Biotechnology | 2004

Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation

Ralph Brandenberger; Henry Wei; Sally Zhang; Shirley Lei; Jaji Murage; Gregory J. Fisk; Yan Li; Chunhui Xu; Rixun Fang; Karl Guegler; Mahendra S. Rao; Ramumkar Mandalam; Jane Lebkowski; Lawrence W. Stanton

Human embryonic stem (hES) cells hold promise for generating an unlimited supply of cells for replacement therapies. To characterize hES cells at the molecular level, we obtained 148,453 expressed sequence tags (ESTs) from undifferentiated hES cells and three differentiated derivative subpopulations. Over 32,000 different transcripts expressed in hES cells were identified, of which more than 16,000 do not match closely any gene in the UniGene public database. Queries to this EST database revealed 532 significantly upregulated and 140 significantly downregulated genes in undifferentiated hES cells. These data highlight changes in the transcriptional network that occur when hES cells differentiate. Among the differentially regulated genes are several components of signaling pathways and transcriptional regulators that likely play key roles in hES cell growth and differentiation. The genomic data presented here may facilitate the derivation of clinically useful cell types from hES cells.


Developmental Dynamics | 2004

Properties of four human embryonic stem cell lines maintained in a feeder‐free culture system

Melissa K. Carpenter; Elen S. Rosler; Gregory J. Fisk; Ralph Brandenberger; Ximena Ares; Takumi Miura; Mary T. Lucero; Mahendra S. Rao

Several laboratories have begun evaluating human ES (hES) cell lines; however, direct comparisons between different hES cell lines have not been performed. We have characterized the properties of four human cell lines maintained in feeder‐free culture conditions. Quantitative assessment of surface markers, microarray analysis of gene expression patterns, expression of SOX‐2, UTF‐1, Rex‐1, OCT3/4, CRIPTO, and telomerase activity demonstrated similar patterns in all hES cell lines examined. Undifferentiated hES cells do not respond to neurotransmitters such as acetylcholine, glutamate, and gamma‐aminobutyric acid. In addition, the undifferentiated hES cells possess gap junctions. Although similarities in marker expression were observed, allotyping showed that all four lines have a distinct HLA profile, predicting differences in transplantation responses. These data provide the first detailed comparison of different hES cell lines and demonstrate remarkable similarities among lines maintained in identical culture conditions. Developmental Dynamics 229:243–258, 2004.


BMC Developmental Biology | 2004

MPSS profiling of human embryonic stem cells

Ralph Brandenberger; Irina Khrebtukova; R. Scott Thies; Takumi Miura; Cai Jingli; Raj K. Puri; Tom Vasicek; Jane Lebkowski; Mahendra S. Rao

BackgroundPooled human embryonic stem cells (hESC) cell lines were profiled to obtain a comprehensive list of genes common to undifferentiated human embryonic stem cells.ResultsPooled hESC lines were profiled to obtain a comprehensive list of genes common to human ES cells. Massively parallel signature sequencing (MPSS) of approximately three million signature tags (signatures) identified close to eleven thousand unique transcripts, of which approximately 25% were uncharacterised or novel genes. Expression of previously identified ES cell markers was confirmed and multiple genes not known to be expressed by ES cells were identified by comparing with public SAGE databases, EST libraries and parallel analysis by microarray and RT-PCR. Chromosomal mapping of expressed genes failed to identify major hotspots and confirmed expression of genes that map to the X and Y chromosome. Comparison with published data sets confirmed the validity of the analysis and the depth and power of MPSS.ConclusionsOverall, our analysis provides a molecular signature of genes expressed by undifferentiated ES cells that can be used to monitor the state of ES cells isolated by different laboratories using independent methods and maintained under differing culture conditions


Stem Cells and Development | 2013

Differentiation of oligodendrocyte progenitor cells from human embryonic stem cells on vitronectin-derived synthetic peptide acrylate surface.

Yan Li; Archna Gautam; Jiwei Yang; Liqun Qiu; Zara Melkoumian; Jennifer L. Weber; Lavanya Telukuntla; Rashi Srivastava; Erik Whiteley; Ralph Brandenberger

Human embryonic stem cell (hESC)-derived oligodendrocyte progenitor cells (OPCs) are being studied for cell replacement therapies, including the treatment of acute spinal cord injury. Current methods of differentiating OPCs from hESCs require complex, animal-derived biological extracellular matrices (ECMs). Defined, low-cost, robust, and scalable culture methods will need to be developed for the widespread deployment and commercialization of hESC-derived cell therapies. Here we describe a defined culture system that uses a vitronectin-derived synthetic peptide acrylate surface (VN-PAS; commercially available as Corning(®) Synthemax(®) surface) in combination with a defined culture medium for hESC growth and differentiation to OPCs. We show that synthetic VN-PAS supports OPC attachment and differentiation, and that hESCs grown on VN-PAS are able to differentiate into OPCs on VN-PAS. Compared to OPCs derived from hESCs grown on ECM of animal origin, higher levels of NG2, a chondroitin sulfate proteoglycan expressed by OPCs, were observed in OPCs differentiated from H1 hESCs grown on VN-PAS, while the expression levels of Nestin and PDGFRα were comparable. In summary, this study demonstrates that synthetic VN-PAS can replace complex, animal-origin ECM to support OPC differentiation from hESCs.


Developmental Biology | 2004

Differences between human and mouse embryonic stem cells.

Irene Ginis; Yongquan Luo; Takumi Miura; Scott Thies; Ralph Brandenberger; Sharon Gerecht-Nir; Michal Amit; Ahmet Hoke; Melissa K. Carpenter; Joseph Itskovitz-Eldor; Mahendra S. Rao


Blood | 2004

Gene expression in human embryonic stem cell lines: unique molecular signature

Bhaskar Bhattacharya; Takumi Miura; Ralph Brandenberger; Josef Mejido; Yongquan Luo; Amy X. Yang; Bharat H. Joshi; Irene Ginis; R. Scott Thies; Michal Amit; Ian Lyons; Brian G. Condie; Joseph Itskovitz-Eldor; Mahendra S. Rao; Raj K. Puri


Stem Cells and Development | 2004

Monitoring Early Differentiation Events in Human Embryonic Stem Cells by Massively Parallel Signature Sequencing and Expressed Sequence Tag Scan

Takumi Miura; Yongquan Luo; Irina Khrebtukova; Ralph Brandenberger; Daixing Zhou; R. Scott Thies; Tom Vasicek; Holly Young; Jane Lebkowski; Melissa K. Carpenter; Mahendra S. Rao


Archive | 2003

Genes that are up- or down-regulated during differentiation of human embryonic stem cells

Lawrence W. Stanton; Ralph Brandenberger; Joseph D. Gold; John M. Irving; Ramkumar Mandalam; Michael Mok; Dawne Shelton


Archive | 2003

Marker system for preparing and characterizing high-quality human embryonic stem cells

Lawrence W. Stanton; Ralph Brandenberger; Joseph D. Gold; John M. Irving; Ramkumar Mandalam; Michael Mok

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Mahendra S. Rao

National Institutes of Health

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Takumi Miura

National Institutes of Health

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