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Dive into the research topics where Rashi Gautam is active.

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Featured researches published by Rashi Gautam.


Nature Genetics | 2003

Hermansky-Pudlak syndrome type 7 (HPS-7) results from mutant dysbindin, a member of the biogenesis of lysosome-related organelles complex 1 (BLOC-1)

Wei Li; Qing Zhang; Naoki Oiso; Edward K. Novak; Rashi Gautam; Edward P. O'Brien; Caroline L. Tinsley; Derek J. Blake; Richard A. Spritz; Neal G. Copeland; Nancy A. Jenkins; Dominick Amato; Bruce A. Roe; Marta Starcevic; Esteban C. Dell'Angelica; Rosemary W. Elliott; Vishnu S. Mishra; Stephen F. Kingsmore; Richard Paylor; Richard T. Swank

Hermansky-Pudlak syndrome (HPS; MIM 203300) is a genetically heterogeneous disorder characterized by oculocutaneous albinism, prolonged bleeding and pulmonary fibrosis due to abnormal vesicle trafficking to lysosomes and related organelles, such as melanosomes and platelet dense granules. In mice, at least 16 loci are associated with HPS, including sandy (sdy; ref. 7). Here we show that the sdy mutant mouse expresses no dysbindin protein owing to a deletion in the gene Dtnbp1 (encoding dysbindin) and that mutation of the human ortholog DTNBP1 causes a novel form of HPS called HPS-7. Dysbindin is a ubiquitously expressed protein that binds to α- and β-dystrobrevins, components of the dystrophin-associated protein complex (DPC) in both muscle and nonmuscle cells. We also show that dysbindin is a component of the biogenesis of lysosome-related organelles complex 1 (BLOC-1; refs. 9–11), which regulates trafficking to lysosome-related organelles and includes the proteins pallidin, muted and cappuccino, which are associated with HPS in mice. These findings show that BLOC-1 is important in producing the HPS phenotype in humans, indicate that dysbindin has a role in the biogenesis of lysosome-related organelles and identify unexpected interactions between components of DPC and BLOC-1.


Journal of Biological Chemistry | 2002

BLOC-1, a novel complex containing the pallidin and muted proteins involved in the biogenesis of melanosomes and platelet-dense granules

Juan M. Falcon-Perez; Marta Starcevic; Rashi Gautam; Esteban C. Dell'Angelica

Recent studies have led to the identification of a group of genes required for normal biogenesis of lysosome-related organelles such as melanosomes and platelet-dense granules. Two of these genes, which are defective in the pallid and muted mutant mouse strains, encode small, coiled-coil-forming proteins that display no homology to each other or to any known protein. We report that these two proteins, pallidin and muted, are components of a novel protein complex. We raised antibodies that allow for detection of pallidin from a wide variety of mammalian cells. Endogenous pallidin was distributed in both soluble and peripheral membrane protein fractions. Size-exclusion chromatography and sedimentation velocity analyses indicated that the bulk of cytosolic pallidin is a component of an asymmetric protein complex with a molecular mass of ∼200 kDa. We named this complex BLOC-1 (for biogenesis oflysosome-related organelles complex 1). Steady-state pallidin protein levels were reduced in fibroblasts derived from muted and reduced pigmentation mice, suggesting that the genes defective in these two mutant strains could encode components of BLOC-1 that are required for pallidin stability. Co-immunoprecipitation and immunodepletion experiments using an antibody to muted confirmed that this protein is a subunit of BLOC-1. Yeast two-hybrid analyses revealed that pallidin is capable of self-association through a region that contains its two coiled-coil forming domains. Unlike AP-3-deficient pearl fibroblasts, which display defects in intracellular zinc storage, zinc distribution was not noticeably affected in pallid or muted fibroblasts. Interestingly, immunofluorescence and in vitro binding experiments demonstrated that pallidin/BLOC-1 is able to associate with actin filaments. We propose that BLOC-1 mediates the biogenesis of lysosome-related organelles by a mechanism that may involve self-assembly and interaction with the actin cytoskeleton.


Proceedings of the National Academy of Sciences of the United States of America | 2003

The mouse organellar biogenesis mutant buff results from a mutation in Vps33a, a homologue of yeast vps33 and Drosophila carnation.

Tamio Suzuki; Naoki Oiso; Rashi Gautam; Edward K. Novak; Jean-Jacques Panthier; P. G. Suprabha; Thomas A. Vida; Richard T. Swank; Richard A. Spritz

In the mouse, more than 16 loci are associated with mutant phenotypes that include defective pigmentation, aberrant targeting of lysosomal enzymes, prolonged bleeding, and immunodeficiency, the result of defective biogenesis of cytoplasmic organelles: melanosomes, lysosomes, and various storage granules. Many of these mouse mutants are homologous to the human Hermansky–Pudlak syndrome (HPS), Chediak–Higashi syndrome, and Griscelli syndrome. We have mapped and positionally cloned one of these mouse loci, buff (bf), which has a mutant phenotype similar to that of human HPS. Mouse bf results from a mutation in Vps33a and thus is homologous to the yeast vacuolar protein-sorting mutant vps33 and Drosophila carnation (car). This is the first found defect of the class C vacuole/prevacuole-associated target soluble N-ethylmaleimide-sensitive factor attachment protein receptor (t-SNARE) complex in mammals and the first mammalian mutant found that is directly homologous to a vps mutation of yeast. VPS33A thus is a good candidate gene for a previously uncharacterized form of human HPS.


Journal of Biological Chemistry | 2004

The Hermansky-Pudlak Syndrome 3 (Cocoa) Protein Is a Component of the Biogenesis of Lysosome-related Organelles Complex-2 (BLOC-2)*

Rashi Gautam; Sreenivasulu Chintala; Wei Li; Qing Zhang; Jian Tan; Edward K. Novak; Santiago M. Di Pietro; Esteban C. Dell'Angelica; Richard T. Swank

Hermansky-Pudlak syndrome (HPS) is a genetically heterogeneous inherited disease affecting vesicle trafficking among lysosome-related organelles. The Hps3, Hps5, and Hps6 genes are mutated in the cocoa, ruby-eye-2, and ruby-eye mouse pigment mutants, respectively, and their human orthologs are mutated in HPS3, HPS5, and HPS6 patients. These three genes encode novel proteins of unknown function. The phenotypes of Hps5/Hps5,Hps6/Hps6 and Hps3/Hps3,Hps6/Hps6 double mutant mice mimic, in coat and eye colors, in melanosome ultrastructure, and in levels of platelet dense granule serotonin, the corresponding phenotypes of single mutants. These facts suggest that the proteins encoded by these genes act within the same pathway or protein complex in vivo to regulate vesicle trafficking. Further, the Hps5 protein is destabilized within tissues of Hps3 and Hps6 mutants, as is the Hps6 protein within tissues of Hps3 and Hps5 mutants. Also, proteins encoded by these genes co-immunoprecipitate and occur in a complex of 350 kDa as determined by sucrose gradient and gel filtration analyses. Together, these results indicate that the Hps3, Hps5, and Hps6 proteins regulate vesicle trafficking to lysosome-related organelles at the physiological level as components of the BLOC-2 (biogenesis of lysosome-related organelles complex-2) protein complex and suggest that the pathogenesis and future therapies of HPS3, HPS5, and HPS6 patients are likely to be similar. Interaction of the Hps5 and Hps6 proteins within BLOC-2 is abolished by the three-amino acid deletion in the Hps6ru mutant allele, indicating that these three amino acids are important for normal BLOC-2 complex formation.


Traffic | 2006

Interaction of Hermansky-Pudlak Syndrome Genes in the Regulation of Lysosome-Related Organelles

Rashi Gautam; Edward K. Novak; Jian Tan; Kazumasa Wakamatsu; Shosuke Ito; Richard T. Swank

Hermansky‐Pudlak Syndrome (HPS) is a genetically heterogeneous disease caused by abnormalities in the synthesis and/or trafficking of lysosome‐related organelles (LROs) including melanosomes, lamellar bodies of lung type II cells and platelet dense granules. At least 15 genes cause HPS in mice, with a significant number specifying novel subunits of protein complexes termed BLOCs (Biogenesis of Lysosome‐related Organelles Complexes). To ascertain whether BLOC complexes functionally interact in vivo, mutant mice doubly or triply deficient in protein subunits of the various BLOC complexes and/or the AP‐3 adaptor complex were constructed and tested for viability and for abnormalities of melanosomes, lung lamellar bodies and lysosomes. All mutants, including those deficient in all three BLOC complexes, were viable though the breeding efficiencies of multiple mutants involving AP‐3 were severely compromised. Interactions of BLOC protein complexes with each other and with AP‐3 to affect most LROs were apparent. However, these interactions were tissue and organelle dependent. These studies document novel biological interactions of BLOC and AP‐3 complexes in the biosynthesis of LROs and assess the role(s) of HPS protein complexes in general health and physiology in mammals. Double and triple mutant HPS mice provide unique and practical experimental advantages in the study of LROs.


BioEssays | 2004

Murine Hermansky–Pudlak syndrome genes: regulators of lysosome‐related organelles

Wei Li; Michael E. Rusiniak; Sreenivasulu Chintala; Rashi Gautam; Edward K. Novak; Richard T. Swank


Nature Genetics | 2003

Ru2 and Ru encode mouse orthologs of the genes mutated in human Hermansky-Pudlak syndrome types 5 and 6.

Qing Zhang; Baohui Zhao; Wei Li; Naoki Oiso; Edward K. Novak; Michael E. Rusiniak; Rashi Gautam; Sreenivasulu Chintala; Edward P. O'Brien; Yuke Zhang; Bruce A. Roe; Rosemary W. Elliott; Eva M. Eicher; Ping Liang; Christian P. Kratz; Eric Legius; Richard A. Spritz; T. Norene O'Sullivan; Neal G. Copeland; Nancy A. Jenkins; Richard T. Swank


Journal of Biological Chemistry | 2003

The Hermansky-Pudlak syndrome 1 (HPS1) and HPS4 proteins are components of two complexes, BLOC-3 and BLOC-4, involved in the biogenesis of lysosome-related organelles.

Pei Wen Chiang; Naoki Oiso; Rashi Gautam; Tamio Suzuki; Richard T. Swank; Richard A. Spritz


Blood | 2007

The Slc35d3 gene, encoding an orphan nucleotide sugar transporter, regulates platelet-dense granules.

Sreenivasulu Chintala; Jian Tan; Rashi Gautam; Michael E. Rusiniak; Xiaoli Guo; Wei Li; William A. Gahl; Marjan Huizing; Richard A. Spritz; Saunie M. Hutton; Edward K. Novak; Richard T. Swank


Blood | 2007

The Slc35d3 gene, encoding an orphan nucleotide sugar transporter, regulates platelet-dense granules. Commentary

Timothy A. Lyerla; Sreenivasulu Chintala; Jian Tan; Rashi Gautam; Michael E. Rusiniak; Xiaoli Guo; Wei Li; William A. Gahl; Marjan Huizing; Richard A. Spritz; Saunie M. Hutton; Edward K. Novak; Richard T. Swank

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Edward K. Novak

Roswell Park Cancer Institute

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Michael E. Rusiniak

Roswell Park Cancer Institute

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Richard A. Spritz

University of Colorado Denver

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Jian Tan

Roswell Park Cancer Institute

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Wei Li

Roswell Park Cancer Institute

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Naoki Oiso

University of Colorado Denver

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Qing Zhang

Roswell Park Cancer Institute

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