Raşit Bilgin

Back to the suture: the distribution of intraspecific genetic diversity in and around anatolia.

The effect of ice ages in speciation and diversification is well established in the literature. In Europe, the Iberian, the Italian and the Balkan peninsulas comprise the main glacial refugia, where the subsequent re-population of Europe started. Though not studied as extensively, Anatolia has also been hinted to be a potential glacial refugium for Europe, and with its proximity to the Caucasus and the Middle East at the same time, has potential to exhibit high levels of intraspecific diversity. The more ubiquitous use and cheaper availability of molecular methods globally now makes it possible to better understand molecular ecology and evolution of the fauna and flora in the genetically understudied regions of the world, such as Anatolia. In this review, the molecular genetic studies undertaken in Anatolia in the last decade, for 29 species of plants and animals, are examined to determine general phylogeographic patterns. In this regard, two major patterns are observed and defined, showing genetic breaks within Anatolia and between Anatolia and the Balkans. A third pattern is also outlined, which suggests Anatolia may be a center of diversity for the surrounding regions. The patterns observed are discussed in terms of their relevance to the location of suture zones, postglacial expansion scenarios, the effect of geographic barriers to gene flow and divergence time estimates, in order to better understand the effect of the geological history of Anatolia on the evolutionary history of the inhabitant species. In view of the current state of knowledge delineated in the review, future research directions are suggested.

Antipodean white sharks on a Mediterranean walkabout? Historical dispersal leads to genetic discontinuity and an endangered anomalous population

The provenance of white sharks (Carcharodon carcharias) in the Mediterranean is both a conundrum and an important conservation issue. Considering this speciess propensity for natal philopatry, any evidence that the Mediterranean stock has little or no contemporary immigration from the Atlantic would suggest that it is extraordinarily vulnerable. To address this issue we sequenced the mitochondrial control region of four rare Mediterranean white sharks. Unexpectedly, the juvenile sequences were identical although collected at different locations and times, showing little genetic differentiation from Indo-Pacific lineages, but strong separation from geographically closer Atlantic/western Indian Ocean haplotypes. Historical long-distance dispersal (probably a consequence of navigational error during past climatic oscillations) and potential founder effects are invoked to explain the anomalous relationships of this isolated ‘sink’ population, highlighting the present vulnerability of its nursery grounds.

Mitochondrial DNA signatures at different spatial scales: from the effects of the Straits of Gibraltar to population structure in the meridional serotine bat ( Eptesicus isabellinus )

The meridional serotine bat Eptesicus isabellinus is found in North Africa and the Iberian Peninsula. We analyzed the genetic structure of E. isabellinus at two different geographic scales to reveal the historical and ecological patterns that have shaped its populations. The role of the Straits of Gibraltar as an isolating barrier between African and Iberian populations is evaluated and the degree of genetic structure and female-mediated gene flow was assessed at a local scale between neighboring colonies. Populations of E. isabellinus from Iberia and northern Morocco show little genetic divergence and share mtDNA haplotypes, indicating that the Straits of Gibraltar are neither an impediment to dispersal nor a cause of genetic differentiation. Our results also suggest that E. isabellinus may have dispersed from western Andalusia into northern Morocco after the last glacial period. At a smaller geographic scale, the colonies studied showed high variation in genetic variability and structure, indicating that no female-mediated gene flow is present. This pattern is consistent with a described pattern of independent endemic viral circulation of the bat rabies virus EBLV-1, which was found when studying rabies dynamics in the same serotine bat colonies.

The mitochondrial and nuclear genetic structure of Myotis capaccinii (Chiroptera: Vespertilionidae) in the Eurasian transition, and its taxonomic implications

Allopatric isolation in glacial refugia has caused differentiation and speciation in many taxa globally. In this study, we investigated the nuclear and mitochondrial genetic differentiation of the long fingered bat, Myotis capaccinii during the ice ages in south‐eastern Europe and Anatolia. The mitochondrial DNA (mtDNA) analyses indicated a suture zone similar to those recorded in other animal species, including bats, suggesting the association of more than one refugium with the region. Contrary to most of the other species where a suture zone was seen in Anatolia, for M. capaccinii the geographical location of the genetic break was in south‐eastern Europe. This mitochondrial differentiation was not reflected in the nuclear microsatellites, however, suggesting that the lack of contact during the ice ages did not result in reproductive isolation. Hence taxonomically, the two mitochondrial clades cannot be treated as separate species.

Phylogeography of the Greater Horseshoe Bat, Rhinolophus ferrumequinum (Chiroptera: Rhinolophidae), in Southeastern Europe and Anatolia, with a Specific Focus on Whether the Sea of Marmara is a Barrier to Gene Flow

Population differentiation during the ice ages, followed by range expansions has significantly contributed to the geographic distribution patterns of the genetic diversity in Europe. In this regard, the Iberian, Italian, Balkan peninsulas and Anatolia comprise important glacial refugia. In different parts of Anatolia, suture zones, where lineages that diverged in the different glacial refugia met again, were observed for several species. In this study, we investigated the mitochondrial genetic differentiation of the greater horseshoe bat, Rhinolophus ferrumequinum in southeastern Europe and Anatolia. The mitochondrial DNA analyses indicated a suture zone in central Anatolia, similar to those recorded in other animal species, showing the presence of more than one refugium within the region. The time of the split of these lineages that diverged in allopatry was dated to the Pleistocene. However, the location of this suture zone did not coincide with the Sea of Marmara, not supporting a recent hypothesis, based on microsatellite data, which states that this water body might be an impediment to post glacial gene flow in this species.

Molecular ecology and phylogeography of the bent‐wing bat complex (Miniopterus schreibersii) (Chiroptera: Vespertilionidae) in Asia Minor and adjacent regions

In this study we investigate population genetic structure and phylogeography of the bent‐wing bat complex (Miniopterus schreibersii) in Asia Minor and adjacent regions. PCR amplification and sequencing of the first hypervariable domain of the mitochondrial control region were used to obtain the genetic data. Morphometric differentiation between lineages was analysed by comparing forearm lengths. We found two reciprocally monophyletic lineages within the M. schreibersii complex, identified as M. s. schreibersii and M. s. pallidus. Distributions of the lineages were allopatric with a U‐shaped suture zone passing through Central Anatolia. The suture zone separated coastal regions occupied by M. s. schreibersii from inland, higher altitude regions occupied by M. s. pallidus. The lineages showed a considerable sequence divergence of c. 9%, accompanied by a corresponding difference in forearm length. The presence of the genetically distinct lineages, with allopatric distribution and corresponding morphometric differences, probably reflects their long isolation during the ice‐age in the Balkans and the Caspian/Caucasus refugia, followed subsequently by expansion into different habitats. Based on the present data, the lineages can be recognized as evolutionary significant units.

Phylogeographic analysis of Anatolian bats highlights the importance of the region for preserving the Chiropteran mitochondrial genetic diversity in the Western Palaearctic

Identification of intraspecific conservation units and incorporating the distribution of genetic diversity into management plans are crucial requirements for assessing effective protection strategies. This study investigates the phylogeographic structures of 33 bat species present in the Near East in order to evaluate the conservation implications of their intraspecific genetic diversity both at regional and large-scale levels. To compare Anatolian populations with the European ones, we utilized two commonly used mitochondrial markers, Cytb and ND1, and analysed them together with the available sequences from GenBank. The management requirements of the identified clades and their taxonomical relations were evaluated by analysing their distributions and the levels of their genetic differentiations. In 12 species and the large Myotis complex, we identified a total of 15 genetically distinct populations found in the Near East, some of which might represent biologically distinct taxa. Comparing the phylogeographic patterns of different taxa indicates that three regions, the Balkans, the Caucasus, and the southern Anatolia, harbour genetically divergent populations and should have higher priority in conservation practices. Considering that Turkey has one of the richest bat fauna in the Mediterranean region and the Anatolian populations of various species are genetically distinct, protecting populations in Turkey is critically important for preserving the genetic diversity of the bats in the Western Palaearctic. Both regional and large-scale conservation strategies, which incorporate the distribution of genetic diversity, should be assessed and further ecological studies are needed to clarify the taxonomic relations of the identified clades.

Syntopic Occurrence in Turkey Supports Separate Species Status for Miniopterus schreibersii schreibersii and M. schreibersii pallidus (Mammalia: Chiroptera)

Miniopterus schreibersii is a complex, polytypic species group with a wide distribution ranging from Northern Africa, Southern Europe to Asia, the Solomon Islands and Northern Australia. Two subspecies previously recognized in Turkey, M. s. schreibersii and M. s. pallidus, differ significantly in nuclear and mitochondrial DNA, and in morphology. Until now, the distribution records of M. s. schreibersii and M. s. pallidus showed that they were allopatric and hence even though there was clear morphological and genetic differentiation between the two taxa, whether they represented separate species or subspecies was still not determined with certainty. Here we present the first data on syntopic occurrence of both forms in three caves in south-eastern Turkey. We show that the three caves host individuals of both taxa by using mitochondrial DNA, nuclear DNA and morphometric analyses. These findings provide the final line of evidence to date, for designation of M. s. schreibersii and M. s. pallidus as two separate species, M. schreibersii and M. pallidus. This will raise the number of species in the Eurobats agreement area from 45 to 46.

Turkey's rich natural heritage under assault.

We read with sad agreement the editorial “Turkey and science academies” (30 September, p. [1801][1]), in which B. Alberts discusses the restructuring of Turkeys Academy of Sciences (TUBA) in order to give the government direct control over it. In addition to destroying TUBAs identity as an

Using Citizen Science Data to Model the Distributions of Common Songbirds of Turkey Under Different Global Climatic Change Scenarios

In this study, we evaluated the potential impact of climate change on the distributions of Turkey’s songbirds in the 21st century by modelling future distributions of 20 resident and nine migratory species under two global climate change scenarios. We combined verified data from an ornithological citizen science initiative (www.kusbank.org) with maximum entropy modeling and eight bioclimatic variables to estimate species distributions and projections for future time periods. Model predictions for resident and migratory species showed high variability, with some species projected to lose and others projected to gain suitable habitat. Our study helps improve the understanding of the current and potential future distributions of Turkey’s songbirds and their responses to climate change, highlights effective strategies to maximize avian conservation efforts in the study region, and provides a model for using citizen science data for biodiversity research in a large developing country with few professional field biologists. Our results demonstrate that climate change will not affect every species equally in Turkey. Expected range reductions in some breeding species will increase the risk of local extinction, whereas others are likely to expand their ranges.