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Dive into the research topics where Rasmus K. Petersen is active.

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Featured researches published by Rasmus K. Petersen.


Stem Cells | 2009

Human multipotent adipose-derived stem cells differentiate into functional brown adipocytes.

Christian Elabd; Chiara Chiellini; Mamen Carmona; Jean Galitzky; Olivia Cochet; Rasmus K. Petersen; Luc Pénicaud; Karsten Kristiansen; Anne Bouloumié; Louis Casteilla; Christian Dani; Gérard Ailhaud; Ez-Zoubir Amri

In contrast to the earlier contention, adult humans have been shown recently to possess active brown adipose tissue with a potential of being of metabolic significance. Up to now, brown fat precursor cells have not been available for human studies. We have shown previously that human multipotent adipose‐derived stem (hMADS) cells exhibit a normal karyotype and high self‐renewal ability; they are known to differentiate into cells that exhibit the key properties of human white adipocytes, that is, uncoupling protein two expression, insulin‐stimulated glucose uptake, lipolysis in response to β‐agonists and atrial natriuretic peptide, and release of adiponectin and leptin. Herein, we show that, upon chronic exposure to a specific PPARγ but not to a PPARβ/δ or a PPARα agonist, hMADS cell‐derived white adipocytes are able to switch to a brown phenotype by expressing both uncoupling protein one (UCP1) and CIDEA mRNA. This switch is accompanied by an increase in oxygen consumption and uncoupling. The expression of UCP1 protein is associated to stimulation of respiration by β‐AR agonists, including β3‐AR agonist. Thus, hMADS cells represent an invaluable cell model to screen for drugs stimulating the formation and/or the uncoupling capacity of human brown adipocytes that could help to dissipate excess caloric intake of individuals. STEM CELLS 2009;27:2753–2760


Journal of Computer-aided Molecular Design | 2011

Pharmacophore-driven identification of PPARγ agonists from natural sources

Rasmus K. Petersen; Kathrine Bisgaard Christensen; A. N. Assimopoulou; Xavier Fretté; Vassilios P. Papageorgiou; Karsten Kristiansen; Irene Kouskoumvekaki

In a search for more effective and safe anti-diabetic compounds, we developed a pharmacophore model based on partial agonists of PPARγ. The model was used for the virtual screening of the Chinese Natural Product Database (CNPD), a library of plant-derived natural products primarily used in folk medicine. From the resulting hits, we selected methyl oleanonate, a compound found, among others, in Pistacia lentiscus var. Chia oleoresin (Chios mastic gum). The acid of methyl oleanonate, oleanonic acid, was identified as a PPARγ agonist through bioassay-guided chromatographic fractionations of Chios mastic gum fractions, whereas some other sub-fractions exhibited also biological activity towards PPARγ. The results from the present work are two-fold: on the one hand we demonstrate that the pharmacophore model we developed is able to select novel ligand scaffolds that act as PPARγ agonists; while at the same time it manifests that natural products are highly relevant for use in virtual screening-based drug discovery.


Progress in Lipid Research | 2016

The elusive endogenous adipogenic PPARγ agonists: Lining up the suspects.

Philip Hallenborg; Rasmus K. Petersen; Irene Kouskoumvekaki; John W. Newman; Lise Madsen; Karsten Kristiansen

The nuclear receptor peroxisome proliferator-activated receptor γ (PPARγ) is the key decisive factor controlling the development of adipocytes. Ligand-mediated activation of PPARγ occurs early during adipogenesis and is thought to prime adipose conversion. Although several fatty acids and their derivatives are known to bind to and activate PPARγ, the identity of the ligand(s) responsible for initiating adipocyte differentiation is still a matter of debate. Here we review recent data on pathways involved in ligand production as well as possible endogenous, adipogenic PPARγ agonists.


Journal of Chemical Information and Modeling | 2013

Discovery of a novel selective PPARγ ligand with partial agonist binding properties by integrated in silico/in vitro work flow.

Irene Kouskoumvekaki; Rasmus K. Petersen; Filip Fratev; Olivier Taboureau; Thomas Eiland Nielsen; Tudor I. Oprea; Si Brask Sonne; Esben N. Flindt; Svava Ósk Jónsdóttir; Karsten Kristiansen

Full agonists to the peroxisome proliferator-activated receptor (PPAR)γ, such as Rosiglitazone, have been associated with a series of undesired side effects, such as weight gain, fluid retention, cardiac hypertrophy, and hepatotoxicity. Nevertheless, PPARγ is involved in the expression of genes that control glucose and lipid metabolism and is an important target for drugs against type 2 diabetes, dyslipidemia, atherosclerosis, and cardiovascular disease. In an effort to identify novel PPARγ ligands with an improved pharmacological profile, emphasis has shifted to selective ligands with partial agonist binding properties. Toward this end we applied an integrated in silico/in vitro workflow, based on pharmacophore- and structure-based virtual screening of the ZINC library, coupled with competitive binding and transactivation assays, and adipocyte differentiation and gene expression studies. Hit compound 9 was identified as the most potent ligand (IC50 = 0.3 μM) and a relatively poor inducer of adipocyte differentiation. The binding mode of compound 9 was confirmed by molecular dynamics simulation, and the calculated free energy of binding was -8.4 kcal/mol. A novel functional group, the carbonitrile group, was identified to be a key substituent in the ligand-protein interactions. Further studies on the transcriptional regulation properties of compound 9 revealed a gene regulatory profile that was to a large extent unique, however functionally closer to that of a partial agonist.


Experimental Gerontology | 2016

No effect of anti-inflammatory medication on postprandial and postexercise muscle protein synthesis in elderly men with slightly elevated systemic inflammation.

Kasper Dideriksen; Søren Reitelseder; Nikolaj Mølkjær Malmgaard-Clausen; Rasmus L. Bechshoeft; Rasmus K. Petersen; Ulla Ramer Mikkelsen; Lars Holm

BACKGROUNDnBased on circulating C-reactive protein (CRP) levels, some individuals develop slightly increased inflammation as they age. In elderly inflamed rats, the muscle response to protein feeding is impaired, whereas it can be maintained by treatment with non-steroidal anti-inflammatory drugs (NSAIDs). It is unknown whether this applies to elderly humans with increased inflammation. Thus, the muscle response to whey protein bolus ingestion with and without acute resistance exercise was compared between healthy elderly individuals and elderly individuals with slightly increased inflammation±NSAID treatment.nnnMETHODSnTwenty-four elderly men (>60years) were recruited. Of those, 14 displayed a slightly increased systemic inflammation (CRP>2mg/l) and were randomly assigned to NSAID (Ibuprofen 1800mg/day) or placebo treatment for 1week. The remaining 10 elderly individuals served as healthy controls (CRP<1mg/l). The muscle protein synthetic response was measured as the fractional synthetic rate (FSR) and p70S6K phosphorylation-to-total protein ratio.nnnRESULTSnThe basal myofibrillar FSR and the myofibrillar FSR responses to whey protein bolus ingestion with and without acute resistance exercise were maintained in inflamed elderly compared to healthy controls (p>0.05) and so was p70S6K phosphorylation. Moreover, NSAID treatment did not significantly improve the myofibrillar and connective tissue FSR responses or reduce the plasma CRP level in inflamed, elderly individuals (p>0.05).nnnCONCLUSIONnA slight increase in systemic inflammation does not affect the basal myofibrillar FSR or the myofibrillar FSR responses, which suggests that elderly individuals with slightly increased inflammation can benefit from protein ingestion and resistance exercise to stimulate muscle protein anabolism. Moreover, the NSAID treatment did not significantly affect the myofibrillar or connective tissue FSR responses to protein ingestion and acute resistance exercise.


European Journal of Medicinal Chemistry | 2016

Design and synthesis of novel Y-shaped barbituric acid derivatives as PPARγ activators.

Vaibhav A. Dixit; Prakash Chandra Rathi; Shweta Bhagat; Holger Gohlke; Rasmus K. Petersen; Karsten Kristiansen; Asit K. Chakraborti; Prasad V. Bharatam

Novel Y-shaped barbituric acid (BA) derivatives have been designed using rational methods including molecular docking. Fourteen novel compounds were synthesized using hydroxyl group protection-deprotection strategies for PPARγ activation. Competitive binding analysis of the synthesized molecules using time-resolved fluorescence resonance energy transfer (FRET) method was carried out, and the IC50 values were determined. The symmetrically substituted derivatives have shown greater binding affinity than unsymmetrically substituted derivatives. Nitrobenzyl and cyanophenyl substituted derivatives have shown reasonable binding affinities (10.1 and 6.5xa0μM, respectively), while mono and diacetate derivatives were found inactive. Molecular dynamics simulations show that the designed compounds have interaction profiles similar to partial agonists. The most significant finding of our study is that BA derivatives with symmetrically substituted weakly polar side chains result in the desired moderate level of PPARγ binding affinities.


Bioorganic & Medicinal Chemistry Letters | 2013

Discovery of new PPARγ agonists based on arylopeptoids

Kasper Worm-Leonhard; Thomas Hjelmgaard; Rasmus K. Petersen; Karsten Kristiansen; John Nielsen

In this study we present the design, synthesis and biological evaluation of a small, first-generation library of small molecule aromatic amides based on the arylopeptoid skeleton. The compounds were efficiently synthesized using a highly convenient submonomer solid-phase methodology which potentially allows for access to great product diversity. The synthesized compounds were tested for their ability to activate peroxisome proliferator-activated receptors (PPARs) and they all acted as PPARγ agonists in the μM range spanning from 2.5- to 14.7-fold activation of the receptor. This is the first discovery of bioactive molecules based on the arylopeptoid architecture.


PLOS ONE | 2017

Synthesis and biological evaluation of dihydropyrano-[2,3-c]pyrazoles as a new class of PPARγ partial agonists

Katrine Qvortrup; Jakob Feldthusen Jensen; Mikael Sørensen; Irene Kouskoumvekaki; Rasmus K. Petersen; Olivier Taboureau; Karsten Kristiansen; Thomas Eiland Nielsen

Peroxisome proliferator-activated receptor γ (PPARγ) is a well-known target for thiazolidinedione antidiabetic drugs. In this paper, we present the synthesis and biological evaluation of a series of dihydropyrano[2,3-c]pyrazole derivatives as a novel family of PPARγ partial agonists. Two analogues were found to display high affinity for PPARγ with potencies in the micro molar range. Both of these hits were selective against PPARγ, since no activity was measured when tested against PPARα, PPARδ and RXRα. In addition, a novel modelling approach based on multiple individual flexible alignments was developed for the identification of ligand binding interactions in PPARγ. In combination with cell-based transactivation experiments, the flexible alignment model provides an excellent analytical tool to evaluate and visualize the effect of ligand chemical structure with respect to receptor binding mode and biological activity.


European Journal of Nutrition | 2018

Even effect of milk protein and carbohydrate intake but no further effect of heavy resistance exercise on myofibrillar protein synthesis in older men

Søren Reitelseder; Kasper Dideriksen; Jakob Agergaard; Nikolaj Mølkjær Malmgaard-Clausen; Rasmus L. Bechshoeft; Rasmus K. Petersen; Anja Serena; Ulla R. Mikkelsen; Lars Holm

PurposeThe responsiveness of older individuals’ skeletal muscle to anabolic strategies may be impaired. However, direct comparisons within the same experimental setting are sparse. The aim of this study was to assess the resting and post-resistance exercise muscle protein synthesis rates in response to two types of milk protein and carbohydrate using a unilateral exercise leg model.MethodsTwenty-seven older (69u2009±u20091xa0year, meanu2009±u2009SE) men were randomly assigned one of three groups: Whey hydrolysate (WH), caseinate (CAS), or carbohydrate (CHO). By applying stable isotope tracer techniques (L-[15N]phenylalanine), the fasted-rested (basal) myofibrillar fractional synthesis rate (FSR) was measured. Hereafter, FSR was measured in the postprandial phase (0.45xa0g nutrient/kg LBM) in both legs, one rested (fed-rest) and one exercised (10u2009×u20098 reps at 70% 1RM; fed-exercise). In addition, the activity of p70S6K and venous plasma insulin, phenylalanine, and leucine concentrations were measured.ResultsInsulin, phenylalanine, and leucine concentrations differed markedly after intake of the different study drinks. The basal FSR in WH, CAS, and CHO were 0.027u2009±u20090.003, 0.030u2009±u20090.003, and 0.030u2009±u20090.004%/h, the fed-rested FSR were 0.043u2009±u20090.004, 0.045u2009±u20090.003, and 0.035u2009±u20090.004%/h, and the fed-exercised FSR were 0.041u2009±u20090.004, 0.043u2009±u20090.004, and 0.034u2009±u20090.004%/h, respectively. No significant differences were observed at any state between the groups. Fed-rested- and fed-exercised FSR were higher than basal (Pu2009<u20090.001). 3xa0h after exercise and feeding, no significant group differences were detected in the activity of p70S6K.ConclusionsMilk protein and carbohydrate supplementation stimulate myofibrillar protein synthesis in older men, with no further effect of heavy resistance exercise within 0–3xa0h post exercise.


British Journal of Nutrition | 2015

Activity of dietary fatty acids on FFA1 and FFA4 and characterisation of pinolenic acid as a dual FFA1/FFA4 agonist with potential effect against metabolic diseases

Elisabeth Christiansen; Kenneth R. Watterson; Claire J. Stocker; Elena Sokol; Laura Jenkins; Katharina Simon; Manuel Grundmann; Rasmus K. Petersen; Edward T. Wargent; Brian D. Hudson; Evi Kostenis; Christer S. Ejsing; Michael A. Cawthorne; Graeme Milligan; Trond Ulven

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Irene Kouskoumvekaki

Technical University of Denmark

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Lars Holm

University of Copenhagen

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Olivier Taboureau

Technical University of Denmark

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Si Brask Sonne

University of Copenhagen

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Thomas Eiland Nielsen

Nanyang Technological University

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