Rebecca Bartley

Relating sediment impacts on coral reefs to watershed sources, processes and management: a review

Modification of terrestrial sediment fluxes can result in increased sedimentation and turbidity in receiving waters, with detrimental impacts on coral reef ecosystems. Preventing anthropogenic sediment reaching coral reefs requires a better understanding of the specific characteristics, sources and processes generating the anthropogenic sediment, so that effective watershed management strategies can be implemented. Here, we review and synthesise research on measured runoff, sediment erosion and sediment delivery from watersheds to near-shore marine areas, with a strong focus on the Burdekin watershed in the Great Barrier Reef region, Australia. We first investigate the characteristics of sediment that pose the greatest risk to coral reef ecosystems. Next we track this sediment back from the marine system into the watershed to determine the storage zones, source areas and processes responsible for sediment generation and run-off. The review determined that only a small proportion of the sediment that has been eroded from the watershed makes it to the mid and outer reefs. The sediment transported >1 km offshore is generally the clay to fine silt (<4-16 μm) fraction, yet there is considerable potential for other terrestrially derived sediment fractions (<63 μm) to be stored in the near-shore zone and remobilised during wind and tide driven re-suspension. The specific source of the fine clay sediments is still under investigation; however, the Bowen, Upper Burdekin and Lower Burdekin sub-watersheds appear to be the dominant source of the clay and fine silt fractions. Sub-surface erosion is the dominant process responsible for the fine sediment exported from these watersheds in recent times, although further work on the particle size of this material is required. Maintaining average minimum ground cover >75% will likely be required to reduce runoff and prevent sub-soil erosion; however, it is not known whether ground cover management alone will reduce sediment supply to ecologically acceptable levels.

Development of a time-stepping sediment budget model for assessing land use impacts in large river basins

The use of river basin modelling to guide mitigation of non-point source pollution of wetlands, estuaries and coastal waters has become widespread. To assess and simulate the impacts of alternate land use or climate scenarios on river washload requires modelling techniques that represent sediment sources and transport at the time scales of system response. Building on the mean-annual SedNet model, we propose a new D-SedNet model which constructs daily budgets of fine sediment sources, transport and deposition for each link in a river network. Erosion rates (hillslope, gully and streambank erosion) and fine sediment sinks (floodplains and reservoirs) are disaggregated from mean annual rates based on daily rainfall and runoff. The model is evaluated in the Burdekin basin in tropical Australia, where policy targets have been set for reducing sediment and nutrient loads to the Great Barrier Reef (GBR) lagoon from grazing and cropping land. D-SedNet predicted annual loads with similar performance to that of a sediment rating curve calibrated to monitored suspended sediment concentrations. Relative to a 22-year reference load time series at the basin outlet derived from a dynamic general additive model based on monitoring data, D-SedNet had a median absolute error of 68% compared with 112% for the rating curve. RMS error was slightly higher for D-SedNet than for the rating curve due to large relative errors on small loads in several drought years. This accuracy is similar to existing agricultural system models used in arable or humid environments. Predicted river loads were sensitive to ground vegetation cover. We conclude that the river network sediment budget model provides some capacity for predicting load time-series independent of monitoring data in ungauged basins, and for evaluating the impact of land management on river sediment load time-series, which is challenging across large regions in data-poor environments.

Informing policy to protect coastal coral reefs: Insight from a global review of reducing agricultural pollution to coastal ecosystems

The continuing degradation of coral reefs has serious consequences for the provision of ecosystem goods and services to local and regional communities. While climate change is considered the most serious risk to coral reefs, agricultural pollution threatens approximately 25% of the total global reef area with further increases in sediment and nutrient fluxes projected over the next 50 years. Here, we aim to inform coral reef management using insights learned from management examples that were successful in reducing agricultural pollution to coastal ecosystems. We identify multiple examples reporting reduced fluxes of sediment and nutrients at end-of-river, and associated declines in nutrient concentrations and algal biomass in receiving coastal waters. Based on the insights obtained, we recommend that future protection of coral reef ecosystems demands policy focused on desired ecosystem outcomes, targeted regulatory approaches, up-scaling of watershed management, and long-term maintenance of scientifically robust monitoring programs linked with adaptive management.

Reducing dissolved inorganic nitrogen in surface runoff water from sugarcane production systems

Nitrogen (N) lost from farms, especially as the highly bioavailable dissolved inorganic form, may be damaging Australias Great Barrier Reef (GBR). As sugarcane is the dominant cropping system in GBR catchments, its N management practises are coming under increasing scrutiny. This study measured dissolved inorganic N lost in surface runoff water and sugarcane productivity over 3 years. The experiment compared the conventional fertiliser N application rate to sugarcane (average 180kg N/ha/year) and a rate based on replacing N exported in the previous crop (average 94kg N/ha/year). Dissolved inorganic N losses in surface water were 72%, 48% and 66% lower in the three monitored years in the reduced N fertiliser treatment. There was no significant difference in sugarcane yield between the two fertiliser N treatments, nor any treatment difference in soil mineral N - both of these results are indicators of the sustainability of the lower fertiliser N applications.

Assessing Water Quality Impacts of Community Defined Land Use Change Scenarios for the Douglas Shire, Far North Queensland

The Douglas Shire is promoted as the only place in the world where two world heritage areas meet — the Great Barrier Reef (GBR) and the Wet Tropics of Far North Queensland. Over 80% of the shires land area is World Heritage listed. On the remaining 20%, economic pressureson primary industries coupled with development pressures to subdivide agricultural land for urban and rural residential expansion provide a challenge not only for local people living in the shire, but also for planners and natural resource managers who have a responsibility to implement the Reef Water Quality Protection Plan (Reefplan) (Commonwealth and Queensland Governments 2003). The purpose of the Reefplan is to develop actions, mechanisms and partnerships to halt and reverse the decline in the quality of water flowing in the Great Barrier Reef lagoon.

Assessment of UAV and Ground-Based Structure from Motion with Multi-View Stereo Photogrammetry in a Gullied Savanna Catchment

Structure from Motion with Multi-View Stereo photogrammetry (SfM-MVS) is increasingly used in geoscience investigations, but has not been thoroughly tested in gullied savanna systems. The aim of this study was to test the accuracy of topographic models derived from aerial (via Unmanned Aerial Vehicle, ‘UAV’) and ground-based (via handheld digital camera, ‘ground’) SfM-MVS in modelling hillslope gully systems in a dry-tropical savanna, and to assess the strengths and limitations of the approach at a hillslope scale and an individual gully scale. UAV surveys covered three separate hillslope gully systems (with areas of 0.412–0.715 km2), while ground surveys assessed individual gullies within the broader systems (with areas of 350–750 m2). SfM-MVS topographic models, including Digital Surface Models (DSM) and dense point clouds, were compared against RTK-GPS point data and a pre-existing airborne LiDAR Digital Elevation Model (DEM). Results indicate that UAV SfM-MVS can deliver topographic models with a resolution and accuracy suitable to define gully systems at a hillslope scale (e.g., approximately 0.1 m resolution with 0.4–1.2 m elevation error), while ground-based SfM-MVS is more capable of quantifying gully morphology (e.g., approximately 0.01 m resolution with 0.04–0.1 m elevation error). Despite difficulties in reconstructing vegetated surfaces, uncertainty as to optimal survey and processing designs, and high computational demands, this study has demonstrated great potential for SfM-MVS to be used as a cost-effective tool to aid in the mapping, modelling and management of hillslope gully systems at different scales, in savanna landscapes and elsewhere.

Grazing impacts on gully dynamics indicate approaches for gully erosion control in northeast Australia: Grazing impacts on gully erosion in northeast Australia

Drainage network extension in semi-arid rangelands has contributed to a large increase in the amount of fine sediment delivered to the coastal lagoon of the Great Barrier Reef, but gully erosion rates and dynamics are poorly understood. This study monitored annual erosion, deposition and vegetation cover in six gullies for 13 years, in granite-derived soils of the tropical Burdekin River basin. We also monitored a further 11 gullies in three nearby catchments for 4 years to investigate the effects of grazing intensity. Under livestock grazing, the long-term fine sediment yield from the planform area of gullies was 6.1 t ha yr. This was 7.3 times the catchment sediment yield, indicating that gullies were erosion hotspots within the catchment. It was estimated that gully erosion supplied between 29 and 44% of catchment sediment yield from 4.5% of catchment area, of which 85%was derived from gully wall erosion. Under long-term livestock exclusion gully sediment yields were 77% lower than those of grazed gullies due to smaller gully extent, and lower erosion rates especially on gully walls. Gully wall erosion will continue to be a major landscape sediment source that is sensitive to grazing pressure, long after gully length and depth have stabilised. Wall erosion was generally lower at higher levels of wall vegetation cover, suggesting that yield could be reduced by increasing cover. Annual variations in gully head erosion and net sediment yield were strongly dependent on annual rainfall and runoff, suggesting that sediment yield would also be reduced if surface runoff could be reduced. Deposition occurred in the downstream valley segments of most gullies. This study concludes that reducing livestock grazing pressure within and around gullies in hillslope drainage lines is a primary method of gully erosion control, which could deliver substantial reductions in sediment yield. Copyright

Spatio-temporal assimilation of modelled catchment loads with monitoring data in the Great Barrier Reef

Soil erosion and sediment transport into waterways and the ocean can adversely affect water clarity, leading to the deterioration of marine ecosystems such as the iconic Great Barrier Reef (GBR) in Australia. Quantifying a sediment load and its associated uncertainty is an important task in delineating how changes in management practices can contribute to improvements in water quality, and therefore continued sustainability of the GBR. However, monitoring data are spatially (and often temporally) sparse, making load estimation complicated, particularly when there are lengthy periods between sampling or during peak flow periods of major events when samples cannot be safely taken. We develop a spatio-temporal statistical model that is mechanistically motivated by a process-based deterministic model called Dynamic SedNet. The model is developed within a Bayesian hierarchical modelling framework that uses dimension reduction to accommodate seasonal and spatial patterns to assimilate monitored sediment concentration and flow data with output from Dynamic SedNet. The approach is applied in the Upper Burdekin catchment in Queensland, Australia, where we obtain daily estimates of sediment concentrations, stream discharge volumes and sediment loads at 411 spatial locations across 20 years. Our approach provides a method for assimilating both monitoring data and modelled output, providing a statistically rigorous method for quantifying uncertainty through space and time that was previously unavailable through process-based models.

Colloidal nitrogen is an important and highly-mobile form of nitrogen discharging into the Great Barrier Reef lagoon

Soil-borne colloids have been linked to long-distance transport of radionuclides, metal(loid)s and nutrients. Colloid-associated nitrogen (N) will have different mechanisms of biogeochemical cycling and potential for water-borne transport over longer distances compared to dissolved N. The role that colloids play in the supply and mobility of N within catchments discharging into the Great Barrier Reef (GBR) lagoon is unexplored. Here, we examine water-dispersible clay (WDC) from soil samples collected from gullies and agricultural drains within three different land uses (sugarcane, non-agricultural land and grazing) within the Townsville area. The proportion of soil N associated with WDC was inversely correlated with total soil N, with up to 45% of the total soil N being colloid-associated in low N gully soils. Within the <0.45 µm fraction of the WDC, only 17–25% of the N was truly dissolved (<3 kDa) at the gully sites compared to 58% in the sugarcane sites. Our results demonstrate the importance of colloidal N and the inaccuracy of assuming N < 0.45 µm is dissolved in the sampled areas, as well as providing an alternate explanation for the large amounts of what has previously been defined as dissolved inorganic N in runoff from non-fertilized grazing land. In particular, they describe why non-fertilized land uses can contribute significant N < 0.45 µm, and why catchment models of nutrient export based on soil N concentrations can over-estimate loads of particulate nitrogen derived from monitoring data (N > 0.45 µm). The findings suggest that managing soil erosion may also contribute to managing N < 0.45 µm.

Insights into the history and timing of post-European land use disturbance on sedimentation rates in catchments draining to the Great Barrier Reef

Sediment runoff has been cited as a major contributor to the declining health of the Great Barrier Reef (GBR), however, climate and land use drivers have not been jointly evaluated. This study used alluvial archives from fluvial benches in two tributaries of the Upper Burdekin catchment together with the best available land use history and climate proxy records to provide insights into the timing of depositional events in this region over the past 500 years. This study suggests that mining and the increased runoff variability in the latter half of the nineteenth century are the likely sources of the original excess sediment that was used to build the bench features in these catchments. Grazing also contributed to increased bench sedimentation prior to 1900, however, the contribution of grazing was likely more significant in the second half of the 20th century, and continues to be a dominant land use contributor today.