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Dive into the research topics where Renata Bura is active.

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Featured researches published by Renata Bura.


Advances in Biochemical Engineering \/ Biotechnology | 2007

Substrate Pretreatment: The Key to Effective Enzymatic Hydrolysis of Lignocellulosics?

Richard P. Chandra; Renata Bura; Warren Mabee; Alex Berlin; Xuejun Pan; John N. Saddler

Although the structure and function of cellulase systems continue to be the subject of intense research, it is widely acknowledged that the rate and extent of the cellulolytic hydrolysis of lignocellulosic substrates is influenced not only by the effectiveness of the enzymes but also by the chemical, physical and morphological characteristics of the heterogeneous lignocellulosic substrates. Although strategies such as site-directed mutagenesis or directed evolution have been successfully employed to improve cellulase properties such as binding affinity, catalytic activity and thermostability, complementary goals that we and other groups have studied have been the determination of which substrate characteristics are responsible for limiting hydrolysis and the development of pretreatment methods that maximize substrate accessibility to the cellulase complex. Over the last few years we have looked at the various lignocellulosic substrate characteristics at the fiber, fibril and microfibril level that have been modified during pretreatment and subsequent hydrolysis. The initial characteristics of the woody biomass and the effect of subsequent pretreatment play a significant role on the development of substrate properties, which in turn govern the efficacy of enzymatic hydrolysis. Focusing particularly on steam pretreatment, this review examines the influence that pretreatment conditions have on substrate characteristics such as lignin and hemicellulose content, crystallinity, degree of polymerization and specific surface, and the resulting implications for effective hydrolysis by cellulases.


Applied Biochemistry and Biotechnology | 2005

Weak lignin-binding enzymes: a novel approach to improve activity of cellulases for hydrolysis of lignocellulosics.

Alex Berlin; Neil R. Gilkes; Arwa Kurabi; Renata Bura; Maobing Tu; Douglas G. Kilburn; John N. Saddler

Economic barriers preventing commercialization of lignocellulose-to-ethanol bioconversion processes include the high cost of hydrolytic enzymes. One strategy for cost reduction is to improve the specific activities of cellulases by genetic engineering. However, screening for improved activity typically uses “ideal” cellulosic substrates, and results are not necessarily applicable to more realistic substrates such as pretreated hardwoods and softwoods. For lignocellulosic substrates, nonproductive binding and inactivation of enzymes by the lignin component appear to be important factors limiting catalytic efficiency. A better understanding of these factors could allow engineering of cellulases with improved activity based on reduced enzyme-lignin interaction (“weak lignin-binding cellulases”). To prove this concept, we have shown that naturally occurring cellulases with similar catalytic activity on a model cellulosic substrate can differ significantly in their affinities for lignin. Moreover, although cellulose-binding domains (CBDs) are hydrophobic and probably participate in lignin binding, we show that cellulases lacking CBDs also have a high affinity for lignin, indicating the presence of lignin-binding sites on the catalytic domain.


Biotechnology Progress | 2009

Influence of xylan on the enzymatic hydrolysis of steam‐pretreated corn stover and hybrid poplar

Renata Bura; Richard P. Chandra; John N. Saddler

The focus of this study was to alter the xylan content of corn stover and poplar using SO2‐catalyzed steam pretreatment to determine the effect on subsequent hydrolysis by commercial cellulase preparations supplemented with or without xylanases. Steam pretreated solids with xylan contents ranging from ∼1 to 19% (w/w) were produced. Higher xylan contents and improved hemicellulose recoveries were obtained with solids pretreated at lower severities or without SO2‐addition prior to pretreatment. The pretreated solids with low xylan content (<4% (w/w)) were characterized by fast and complete cellulose to glucose conversion when utilizing cellulases. Commercial cellulases required xylanase supplementation for effective hydrolysis of pretreated substrates containing higher amounts of xylan. It was apparent that the xylan content influenced both the enzyme requirements for hydrolysis and the recovery of sugars during the pretreatment process.


Applied Biochemistry and Biotechnology | 2005

Weak Lignin-Binding Enzymes

Alex Berlin; Neil R. Gilkes; Arwa Kurabi; Renata Bura; Maobing Tu; Douglas G. Kilburn; John N. Saddler

Economic barriers preventing commercialization of lignocellulose-to-ethanol bioconversion processes include the high cost of hydrolytic enzymes. One strategy for cost reduction is to improve the specific activities of cellulases by genetic engineering. However, screening for improved activity typically uses “ideal” cellulosic substrates, and results are not necessarily applicable to more realistic substrates such as pretreated hardwoods and softwoods. For lignocellulosic substrates, nonproductive binding and inactivation of enzymes by the lignin component appear to be important factors limiting catalytic efficiency. A better understanding of these factors could allow engineering of cellulases with improved activity based on reduced enzyme-lignin interaction (“weak lignin-binding cellulases”). To prove this concept, we have shown that naturally occurring cellulases with similar catalytic activity on a model cellulosic substrate can differ significantly in their affinities for lignin. Moreover, although cellulose-binding domains (CBDs) are hydrophobic and probably participate in lignin binding, we show that cellulases lacking CBDs also have a high affinity for lignin, indicating the presence of lignin-binding sites on the catalytic domain.


Applied Biochemistry and Biotechnology | 2006

Updates on softwood-to-ethanol process development.

Warren Mabee; David J. Gregg; Claudio Arato; Alex Berlin; Renata Bura; Neil R. Gilkes; Olga Mirochnik; Xuejun Pan; E. Kendall Pye; John N. Saddler

Softwoods are generally considered to be one of the most difficult lignocellulosic feedstocks to hydrolyze to sugars for fermentation, primarily owing to the nature and amount of lignin. If the inhibitory effect of lignin can be significantly reduced, softwoods may become a more useful feedstock for the bioconversion processes. Moreover, strategies developed to reduce problems with softwood lignin may also provide a means to enhance the processing of other lignocellulosic substrates. The Forest Products Biotechnology Group at the University of British Columbia has been developing softwood-to-ethanol processes with SO2-catalyzed steam explosion and ethanol organosolv pretreatments. Lignin from the steam explosion process has relatively low reactivity and, consequently, low product value, compared with the high-value coproduct that can be obtained through organosolv. The technical and economic challenges of both processes are presented, together with suggestions for future process development.


Applied Biochemistry and Biotechnology | 2006

Evaluation of Cellulase Preparations for Hydrolysis of Hardwood Substrates

Alex Berlin; Neil R. Gilkes; Douglas G. Kilburn; V.M. Maximenko; Renata Bura; A. V. Markov; A. A. Skomarovsky; Alexander V. Gusakov; A. P. Sinitsyn; O. N. Okunev; Irina Solovieva; John N. Saddler

Seven cellulase preparations from Penicillium and Trichoderma spp. were evaluated for their ability to hydrolyze the cellulose fraction of hardwoods (yellow poplar and red maple) pretreated by organosolv extraction, as well as model cellulosic substrates such as filter paper. There was no significant correlation among hydrolytic performance on pretreated hardwood, based on glucose release, and filter paper activity. However, performance on pretreated hardwood showed significant correlations to the levels of endogenous β-glucosidase and xylanase activities in the cellulase preparation. Accordingly, differences in performance were reduced or eliminated following supplementation with a crude β-glucosidase preparation containing both activities. These results complement a previous investigation using softwoods pretreated by either organosolv extraction or steam explosion. Cellulase preparations that performed best on hardwood also showed superior performance on the softwood substrates.


Applied Biochemistry and Biotechnology | 2002

SO2-Catalyzed steam explosion of corn fiber for ethanol production

Renata Bura; Shawn D. Mansfield; John N. Saddler; Rodney J. Bothast

Corn fiber, a by-product of the corn wet-milling industry, represents a renewable resource that is readily available in significant quantities and could potentially serve as a low-cost feedstock for the production of fuel-grade alcohol. In this study, we used a batch reactor to steam explode corn fiber at various degrees of severity to evaluate the potential of using this feedstock in the bioconversion process. The results indicated that maximum sugar yields (soluble and following enzymatic hydrolysis) were recovered from corn fiber that was pretreated at 190 degrees C for 5 min with 6% SO2. Sequential SO2-catalyzed steam explosion and enzymatic hydrolysis resulted in very high conversion (81%) of all polysaccharides in the corn fiber to monomeric sugars. Subsequently, Saccharomyces cerevisiae was able to convert the resultant corn fiber hydrolysates to ethanol very efficiently, yielding 90-96% of theoretical conversion during the fermentation process.


Bioresource Technology | 2011

The effect of biomass moisture content on bioethanol yields from steam pretreated switchgrass and sugarcane bagasse

Shannon Ewanick; Renata Bura

This study aimed to determine the effect of moisture content of three different feedstocks on overall ethanol yield. Switchgrass and sugarcane bagasse from two sources were either soaked in water (∼80% moisture) or left dry (∼12% moisture), and half each of these were impregnated with 3%w/w SO(2) and all were steam pretreated. The twelve resulting substrates were compared based on overall sugar recovery after pretreatment, cellulose conversion following enzymatic hydrolysis, and ethanol yield following simultaneous saccharification and fermentation. The overall ethanol yield after simultaneous saccharification and fermentation of hexoses was 18-28% higher in samples that were soaked prior to SO(2) addition than in SO(2)-catalyzed samples that were not soaked. In samples that were uncatalyzed, soaking made little difference, indicating that the positive effect of increased moisture content may be related to increased permeability of the biomass to SO(2).


Applied Biochemistry and Biotechnology | 2003

Optimization of SO2-catalyzed steam pretreatment of corn fiber for ethanol production.

Renata Bura; Rodney J. Bothast; Shawn D. Mansfield; John N. Saddler

A batch reactor was employed to steam explode corn fiber at various degrees of severity to evaluate the potential of using this feedstock as part of an enzymatically mediated cellulose-to-ethanol process. Severity was controlled by altering temperature (150-230 degrees C), residence time (1-9 min), and SO2 concentration (0-6% [w/w] dry matter). The effects of varying the different parameters were assessed by response surface modeling. The results indicated that maximum sugar yields (hemicellulose-derived water soluble, and cellulose-derived following enzymatic hydrolysis) were recovered from corn fiber pretreated at 190 degrees C for 5 minutes after exposure to 3% SO2. Sequential SO2-catalyzed steam explosion and enzymatic hydrolysis resulted in a conversion efficiency of 81% of the combined original hemicellulose and cellulose in the corn fiber to monomeric sugars. An additional posthydrolysis step performed on water soluble hemicellulose stream increased the concentration of sugars available for fermentation by 10%, resulting in the high conversion efficiency of 91%. Saccharomyces cerevisiae was able to ferment the resultant corn fiber hydrolysates, perhydrolysate, and liquid fraction from the posthydrolysis steps to 89, 94, and 85% of theoretical ethanol conversion, respectively. It was apparent that all of the parameters investigated during the steam explosion pretreatment had a significant effect on sugar recovery, inhibitory formation, enzymatic conversion efficiency, and fermentation capacity of the yeast.


Bioresource Technology | 2012

Converting lignocellulosic solid waste into ethanol for the State of Washington: an investigation of treatment technologies and environmental impacts.

Elliott Schmitt; Renata Bura; Rick Gustafson; Joyce Smith Cooper; Azra Vajzovic

There is little research literature on the conversion of lignocellulosic rich waste streams to ethanol, and even fewer have investigated both the technical aspects and environmental impacts together. This study assessed technical and environmental challenges of converting three lignocellulosic waste streams to ethanol: municipal solid waste (MSW), low grade mixed waste paper (MWP), and organic yard waste (YW). Experimental results showed high conversion yields for all three streams using suitable conversion methods. Environmental impacts are highly dependent on conversion technology, and process conditions used. Life cycle assessment results showed that both chemicals production and waste collection are important factors to be included within a waste-to-ethanol study.

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John N. Saddler

University of British Columbia

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Rick Gustafson

University of Washington

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Alex Berlin

University of British Columbia

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Neil R. Gilkes

University of British Columbia

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Douglas G. Kilburn

University of British Columbia

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Arwa Kurabi

University of California

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Azra Vajzovic

University of Washington

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Chang Dou

University of Washington

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Sharon L. Doty

University of Washington

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