Richard Edema

Morphological and genetic diversity analysis of rice accessions (Oryza sativa L.) differing in iron toxicity tolerance

A major emphasis in breeding for iron toxicity tolerance in rice is to identify differences that are associated with resistance and harness them for genetic improvement. In this study, thirty accessions, including IRRI gene bank accessions, two varieties from Brazil, 8 cultivars from West Africa and 10 cultivars from Uganda were analyzed for sensitivity to iron toxicity, and genetic diversity using morphological and SSR markers. Two genotypes, IR61612-313-16-2-2-1 and Suakoko 8 showed significantly high resistance with an average score of ≤ 3.5 on 1–9 scale. The SRR markers were highly informative and showed mean polymorphism information content (pic) of 0.68. The PIC values revealed that RM10793, RM3412, RM333, RM562, RM13628, RM310, RM5749, and RM154 could be the best markers for genetic diversity estimation of these rice cultivars. Diversity at the gene level showed an average of 4.61 alleles ranging from 2 to 12 per locus. Mean gene diversity (H) value for all SSR loci for the 30 genotypes evaluated was 0.69 but was decreased to 0.53 when analysis was performed on Ugandan accessions. The low genetic diversity found among the Ugandan accessions is the evidence of a narrow genetic base, and such a scenario has a potential vulnerability for resistance break down. A low correlation was detected between the observed molecular and morphological datasets. This means that a combination of morphological traits and SSR analysis would be required when assessing genetic variation under iron toxic conditions, and could be a practical strategy for breeders when planning crosses. A distinction between the resistant and susceptible accessions in both phenotyping and SSR datasets suggests the presence of unique alleles that could be harnessed for improvement of rice against iron toxicity.

Tolerance of rice germplasm to iron toxicity stress and the relationship between tolerance, Fe2+, P and K content in the leaves and roots

Rice varieties commonly grown in Uganda are generally intolerant to iron toxicity stress. Rice germplasm originating from other countries might potentially have better iron toxicity tolerance. Field and greenhouse experiments were conducted to determine variation in iron toxicity tolerance and uptake of macronutrients in 19 rice cultivars. Iron toxicity reduced grain yield by 34.2% under field conditions and 28.3% under greenhouse conditions. Tolerance to iron toxicity was associated with high biomass production and phosphorus content in the leaves. Resistant cultivars retained more iron in the root tissue, confirming earlier findings that root retention is more efficient as an avoidance/exclusion mechanism. Growth and nutrient uptake showed negative correlation with iron content in the leaves, suggesting that both traits were impacted by iron toxicity. Results showed a significant correlation (r = 0.76) between P and K content of leaves, suggesting that P has a significant role in the uptake of K under iron toxic conditions. Shoot levels of both nutrients seem to determine varietal tolerance to iron toxicity. Four varieties, PNA, K98, IR73678-20-1-B and WITA4, showed less variability in biomass production and nutrient uptake and could potentially serve as new germplasm sources for genetic improvement of rice to iron toxicity.

Combining ability for beta-carotene and important quantitative traits in a cassava f1 population

Cassava is ideal for biofortification due to its popularity as a root staple among populations with high vitamin A malnutrition. The crop is vegetatively propagated and retains the enhanced trait across generations. The combining ability for beta-carotene content and important yield trait was evaluated in a cassava F1 generation. Ten high beta-carotene clones from International Institute of Tropical Agriculture (IITA) were hybridized with ten local clones in a North Carolina Design II mating design. The F1 population was evaluated at the Kenya Agricultural Research Institute (KARI). A total of 125 families were evaluated, including 35 reciprocal crosses. The IITA parents had highly significant (P ≤ 0.001) General Combining Ability (GCA) for pulp colour and plant height. The GCA of the local parents was significant (P≤ 0.05) for harvest index, number of lobes (P≤ 0.05) and for plant height (P≤ 0.001). The Specific Combining Ability (SCA) was significant for harvest index and plant height at P≤ 0.05 and P≤ 0.001 respectively. Root pulp colour was influenced by both additive and non-additive genetic effects. There were also maternal effects associated with the trait. Results indicated that local cassava varieties can be improved for beta-carotene content without a decline in agronomic performance.

Inheritance of yield and yield-related traits in highland maize hybrids of Uganda

Although many studies have been conducted on gene action of grain yield and yield related traits in maize, none of them focused on highland maize in Uganda. This study was conducted to establish the gene action controlling inheritance of yield and its related traits in highland maize hybrids. Thirty-six F1 hybrids generated from a 9 x 9 half diallel mating design, were planted with two local checks in three highland locations; Kalengyere, Kachwekano, and Buginyanya with two replications using a 2 x 19 alpha (0, 1) lattice design. Results showed that inheritance of ear length and anthesis-silking interval was controlled by both additive and non-additive gene action while the inheritance of days to anthesis, days to silking was mainly controlled by additive gene action. The inheritance of grain yield and other yield related traits was greatly influenced by environment and genotype x environment interaction. Considering the great influence of the environment and genotype x environment interaction on most of the traits including grain yield, further testing in additional locations over more seasons and broadening the genetic base of the parents is encouraged.

Genetics of drought tolerance in common bean genotypes adapted to Ugandan conditions.

This item can be retrieved directly from the publisher at http://dx.doi.org/10.5897/JPBCS2014.0462