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Dive into the research topics where Rika Indri Astuti is active.

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Featured researches published by Rika Indri Astuti.


Nitric Oxide | 2016

Nitric oxide signaling and its role in oxidative stress response in Schizosaccharomyces pombe.

Rika Indri Astuti; Daisuke Watanabe; Hiroshi Takagi

In the fission yeast Schizosaccharomyces pombe, we found that the putative NO dioxygenase SPAC869.02c (named Yhb1) and the S-nitrosoglutathione reductase Fmd2 cooperatively reduced intracellular NO levels as NO-detoxification enzymes. Although both mRNA and protein levels were increased with exogenous NO, their expression patterns were different during growth phases. While treatment with an NO synthase inhibitor in the log phase abrogated both NO production and Yhb1 expression, induction of Fmd2 in the stationary phase was correlated with elevated mitochondrial respiratory chain (MRC) activity, confirmed by the fact that inhibition of MRC complex III led to a decrease in Fmd2 and NO levels. Moreover, NO was localized in the mitochondria in the stationary phase, suggesting that there are two distinctive types of NO signaling in S. pombe. For mitochondria, pretreatment with an NO donor rescued cell growth by repressing generation of reactive oxygen species (ROS) under oxidative stress. DNA microarray analysis revealed that exogenous NO contributes to tolerance to hydrogen peroxide (H2O2) by (i) inhibition of Fe(3+) to Fe(2+) conversion, (ii) upregulation of the H2O2-detoxifying enzymes, and (iii) downregulation of the MRC genes, suggesting that NO plays a pivotal role in the negative feedback system to regulate ROS levels in S. pombe.


Applied Microbiology and Biotechnology | 2016

Nitric oxide signaling in yeast.

Rika Indri Astuti; Ryo Nasuno; Hiroshi Takagi

As a cellular signaling molecule, nitric oxide (NO) is widely conserved from microorganisms, such as bacteria, yeasts, and fungi, to higher eukaryotes including plants and mammals. NO is mainly produced by NO synthase (NOS) or nitrite reductase (NIR) activity. There are several NO detoxification systems, including NO dioxygenase (NOD) and S-nitrosoglutathione reductase (GSNOR). NO homeostasis based on the balance between NO synthesis and degradation is important for the regulation of its physiological functions because an excess level of NO causes nitrosative stress due to the high reactivity of NO and NO-derived compounds. In yeast, NO may be involved in stress responses, but NO and its signaling have been poorly understood due to the lack of mammalian NOS orthologs in the genome. Even though the activities of NOS and NIR have been observed in yeast cells, the gene encoding NOS and the NO production mechanism catalyzed by NIR remain unclear. On the other hand, yeast cells employ NOD and GSNOR to maintain an intracellular redox balance following endogenous NO production, exogenous NO treatment, or environmental stresses. This article reviews NO metabolism (synthesis, degradation) and its regulation in yeast. The physiological roles of NO in yeast, including the oxidative stress response, are also discussed here. Such investigations into NO signaling are essential for understanding the NO-dependent genetic and physiological modulations. In addition to being responsible for the pathology and pharmacology of various degenerative diseases, NO signaling may be a potential target for the construction and engineering of industrial yeast strains.


Archive | 2018

Nitric Oxide Signalling in Yeast

Rika Indri Astuti; Ryo Nasuno; Hiroshi Takagi

Nitric oxide (NO) is a cellular signalling molecule widely conserved among organisms, including microorganisms such as bacteria, yeasts, and fungi, and higher eukaryotes such as plants and mammals. NO is mainly produced by the activities of NO synthase (NOS) or nitrite reductase (NIR). There are several NO detoxification systems, including NO dioxygenase (NOD) and S-nitrosoglutathione reductase (GSNOR). NO homeostasis, based on the balance between NO synthesis and degradation, is important for regulating its physiological functions, since an excess of NO causes nitrosative stress due to the high reactivity of NO and NO-derived compounds. In yeast, NO may be involved in stress responses, but the role of NO and the mechanism underlying NO signalling are poorly understood due to the lack of mammalian NOS orthologs in the yeast genome. NOS and NIR activities have been observed in yeast cells, but the gene-encoding NOS and the mechanism by which NO production is catalysed by NIR remain unclear. On the other hand, yeast cells employ NOD and GSNOR to maintain intracellular redox balance following endogenous NO production, treatment with exogenous NO, or exposure to environmental stresses. This article reviews NO metabolism (synthesis, degradation) and its regulation in yeast. The physiological roles of NO in yeast, including the oxidative stress response, are also discussed. Such investigations into NO signalling are essential for understanding how NO modulates the genetics and physiology of yeast. In addition to being responsible for the pathology and pharmacology of various degenerative diseases, NO signalling may be a potential target for the construction and engineering of industrial yeast strains.


American Journal of Agricultural and Biological Sciences | 2011

Screening of Pseudomonas sp. Isolated from Rhizosphere of Soybean Plant as Plant Growth Promoter and Biocontrol Agent

Aris Tri Wahyudi; Rika Indri Astuti; Giyanto


Journal of General Plant Pathology | 2017

Leaf blast disease reduction by rice-phyllosphere actinomycetes producing bioactive compounds

Wiwiek Harsonowati; Rika Indri Astuti; Aris Tri Wahyudi


Journal of Biological Sciences | 2018

Ethanol Production by Novel Proline Accumulating Pichia kudriavzevii Mutants Strains Tolerant to High Temperature and Ethanol Stresses

Rika Indri Astuti; Sena Alifianti; Ratu Nabila Maisyitoh; Nisa Rachmania Mubarik; Anja Meryandini


American Journal of Biochemistry and Biotechnology | 2017

Bioactive Compounds from Sponge Associated Bacteria: Anticancer Activity and NRPS-PKS Gene Expression in Different Carbon Sources

Jepri Agung Priyanto; Rika Indri Astuti; Jun Nomura; Aris Tri Wahyudi


Nitric Oxide | 2014

P102 - The role of nitric oxide in the fission yeast Schizosaccharomyces pombe under oxidative stress conditions

Rika Indri Astuti; Hiroshi Takagi


Indonesian Journal of Biotechnology | 2010

Detection and Cloning of a Gene Involved in Zwitermicin A Synthesis from Plant Growth Promoting Rhizobacteria of Bacillus sp CR64

Aris Tri Wahyudi; Rika Indri Astuti; Nisa Rachmania Mubarik; Sarah Asih Faulina


Archive | 2008

Analisis karakter pseudomonas sp. sebagai agen pemacu pertumbuhan tanaman dan biokontrol fungi patogen

Rika Indri Astuti

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Aris Tri Wahyudi

Bogor Agricultural University

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Hiroshi Takagi

Nara Institute of Science and Technology

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Ryo Nasuno

Nara Institute of Science and Technology

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Anja Meryandini

Bogor Agricultural University

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Wiwiek Harsonowati

Bogor Agricultural University

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Daisuke Watanabe

Nara Institute of Science and Technology

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