Rosichon Ubaidillah
Indonesian Institute of Sciences
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Featured researches published by Rosichon Ubaidillah.
Systematic Biology | 2012
Astrid Cruaud; Nina Rønsted; Bhanumas Chantarasuwan; Lien-Siang Chou; Wendy L. Clement; Arnaud Couloux; Benjamin R. Cousins; Gwenaëlle Genson; Rhett D. Harrison; Paul Hanson; Martine Hossaert-McKey; Roula Jabbour-Zahab; Emmanuelle Jousselin; Carole Kerdelhué; Finn Kjellberg; Carlos Lopez-Vaamonde; John Peebles; Yan-Qiong Peng; Rodrigo Augusto Santinelo Pereira; Tselil Schramm; Rosichon Ubaidillah; Simon van Noort; George D. Weiblen; Da Rong Yang; Anak Yodpinyanee; Ran Libeskind-Hadas; James M. Cook; Jean Yves Rasplus; Vincent Savolainen
It is thought that speciation in phytophagous insects is often due to colonization of novel host plants, because radiations of plant and insect lineages are typically asynchronous. Recent phylogenetic comparisons have supported this model of diversification for both insect herbivores and specialized pollinators. An exceptional case where contemporaneous plant-insect diversification might be expected is the obligate mutualism between fig trees (Ficus species, Moraceae) and their pollinating wasps (Agaonidae, Hymenoptera). The ubiquity and ecological significance of this mutualism in tropical and subtropical ecosystems has long intrigued biologists, but the systematic challenge posed by >750 interacting species pairs has hindered progress toward understanding its evolutionary history. In particular, taxon sampling and analytical tools have been insufficient for large-scale cophylogenetic analyses. Here, we sampled nearly 200 interacting pairs of fig and wasp species from across the globe. Two supermatrices were assembled: on an average, wasps had sequences from 77% of 6 genes (5.6 kb), figs had sequences from 60% of 5 genes (5.5 kb), and overall 850 new DNA sequences were generated for this study. We also developed a new analytical tool, Jane 2, for event-based phylogenetic reconciliation analysis of very large data sets. Separate Bayesian phylogenetic analyses for figs and fig wasps under relaxed molecular clock assumptions indicate Cretaceous diversification of crown groups and contemporaneous divergence for nearly half of all fig and pollinator lineages. Event-based cophylogenetic analyses further support the codiversification hypothesis. Biogeographic analyses indicate that the present-day distribution of fig and pollinator lineages is consistent with a Eurasian origin and subsequent dispersal, rather than with Gondwanan vicariance. Overall, our findings indicate that the fig-pollinator mutualism represents an extreme case among plant-insect interactions of coordinated dispersal and long-term codiversification. [Biogeography; coevolution; cospeciation; host switching; long-branch attraction; phylogeny.].
BMC Evolutionary Biology | 2011
Astrid Cruaud; Roula Jabbour-Zahab; Gwenaëlle Genson; Finn Kjellberg; Noppol Kobmoo; Simon van Noort; Yang DaRong; Peng YanQiong; Rosichon Ubaidillah; Paul Hanson; Otilene Santos-Mattos; Fernando Henrique Antoniolli Farache; Rodrigo Augusto Santinelo Pereira; Carole Kerdelhué; Jean-Yves Rasplus
BackgroundNon-pollinating Sycophaginae (Hymenoptera, Chalcidoidea) form small communities within Urostigma and Sycomorus fig trees. The species show differences in galling habits and exhibit apterous, winged or dimorphic males. The large gall inducers oviposit early in syconium development and lay few eggs; the small gall inducers lay more eggs soon after pollination; the ostiolar gall-inducers enter the syconium to oviposit and the cleptoparasites oviposit in galls induced by other fig wasps. The systematics of the group remains unclear and only one phylogeny based on limited sampling has been published to date. Here we present an expanded phylogeny for sycophagine fig wasps including about 1.5 times the number of described species. We sequenced mitochondrial and nuclear markers (4.2 kb) on 73 species and 145 individuals and conducted maximum likelihood and Bayesian phylogenetic analyses. We then used this phylogeny to reconstruct the evolution of Sycophaginae life-history strategies and test if the presence of winged males and small brood size may be correlated.ResultsThe resulting trees are well resolved and strongly supported. With the exception of Apocrytophagus, which is paraphyletic with respect to Sycophaga, all genera are monophyletic. The Sycophaginae are divided into three clades: (i) Eukoebelea; (ii) Pseudidarnes, Anidarnes and Conidarnes and (iii) Apocryptophagus, Sycophaga and Idarnes. The ancestral states for galling habits and male morphology remain ambiguous and our reconstructions show that the two traits are evolutionary labile.ConclusionsThe three main clades could be considered as tribes and we list some morphological characters that define them. The same biologies re-evolved several times independently, which make Sycophaginae an interesting model to test predictions on what factors will canalize the evolution of a particular biology. The ostiolar gall-inducers are the only monophyletic group. In 15 Myr, they evolved several morphological adaptations to enter the syconia that make them strongly divergent from their sister taxa. Sycophaginae appears to be another example where sexual selection on male mating opportunities favored winged males in species with small broods and wingless males in species with large broods. However, some species are exceptional in that they lay few eggs but exhibit apterous males, which we hypothesize could be due to other selective pressures selecting against the re-appearance of winged morphs.
Frontiers in Zoology | 2013
Michael Balke; Stefan Schmidt; Axel Hausmann; Emmanuel F. A. Toussaint; Johannes Bergsten; Matthew L. Buffington; Christoph Häuser; Alexander Kroupa; Gregor Hagedorn; Alexander Riedel; Andrew Polaszek; Rosichon Ubaidillah; Lars Krogmann; Andreas Zwick; Martin Fikáček; Jiří Hájek; Mariano C. Michat; Christopher H. Dietrich; Beth Mantle; Peter K. L. Ng; Donald Hobern
BackgroundMany scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis.DiscussionRobotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection.The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general.Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions.SummaryOur proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.
Entomological Science | 2006
Rosichon Ubaidillah
Two new species of the parasitoid wasp genus Trichospilus (Chalcidoidea: Eulophidae: Eulophinae) are described from Java and Sulawesi, Indonesia. A key to all species of Trichospilus worldwide is provided.
Entomological Science | 2003
Rosichon Ubaidillah; John Lasalle; Donald L. J. Quicke; Jun-ichi Kojima
A total of 56 morphological characters were analyzed for 53 cirrospiline species that represent all of the 17 described genera of the tribe. The other taxa of the Eulophinae included in the analysis were six species of six representative genera in the tribe Eulophini, a species of Elasmus (the only genus comprising the tribe Elasmini), and a species of Trichospilus (unplaced). Trichospilus and two of the six genera of Eulophini examined were placed within Cirrospilini. Monophyly of Cirrospilini (when these two genera of Eulophini and Trichospilus are included) and of the cirrospiline genera for which more than one species were examined was supported, but the relationships between the genera were poorly resolved. An exception was Cirrospilus, the largest genus in the Cirrospilini, monophyly of which was not supported to any extent.
Entomological Science | 2003
Jun-ichi Kojima; Rosichon Ubaidillah
Two new species in the cryptic chrysidid wasp subfamily Loboscelidiinae are described based on males from Gunung Halimun National Park, West Java, Indonesia. One is the second species in Rhadinoscelidia Kimsey, and the other, belonging in Loboscelidia Westwood, is the first species of the genus for the Indonesian fauna.
Oecologia | 2017
Fernando A. Schmidt; Carla Rodrigues Ribas; Tathiana G. Sobrinho; Rosichon Ubaidillah; José H. Schoereder; Yann Clough; Teja Tscharntke
Local biodiversity can be expected to be similar worldwide if environmental conditions are similar. Here, we hypothesize that tropical ant communities with different types of regional species pools but at similar habitat types in Brazil and Indonesia show similar diversity patterns at multiple spatial scales, when comparing (1) the relative contribution of alpha and beta diversity to gamma diversity; (2) the number of distinct communities (community differentiation); and (3) the drivers of β-diversity (species replacement or species loss/gain) at each spatial scale. In both countries, rainforests and savannas (biome scale) were represented by three landscapes (landscape scale), each with four transects (site scale) and each transect with 10 pitfall traps (local scale). At the local scale, α-diversity was higher and β-diversity lower than expected from null models. Hence, we observed a high coexistence of species across biomes. The replacement of species seemed the most important factor for β-diversity among sites and among landscapes across biomes. Species sorting, landscape-moderated species distribution and neutral drift are potential mechanisms for the high β-diversity among sites within landscapes. At the biome scale, different evolutionary histories produced great differences in ant community composition, so the replacement of species is, at this scale, the most important driver of beta diversity. According to these key findings, we conclude that distinct regional ant species pools from similar tropical habitat types are similarly constrained across several spatial scales, regardless of the continent considered.
Journal of Hymenoptera Research | 2016
Hari Nugroho; Rosichon Ubaidillah; Jun-ichi Kojima
The taxonomic history and current taxonomic status of the presocial potter wasp genus Calligaster de Saussure, 1852, at generic and species levels are reviewed. The hitherto-unknown female of Calligaster viridipennis Giordani Soika, 1960, is described based on specimens newly collected in Central and Southeast Sulawesi. A key to species is also provided.
Animal Biology | 2018
Van Lun Low; Yusoff Norma-Rashid; Rosichon Ubaidillah; Amri Yusoff; Batah Kunalan Prakash; Tiong Kai Tan; Chee Dhang Chen; Mohd Sofian-Azirun
Here we present the first attempt to test for genetic differentiation among four distinct colour morphs of the Asian golden web spider Nephila antipodiana Walckenaer. Fragments of the 18S rRNA (18S) and cytochrome c oxidase subunit I (COI) genes were sequenced in eight populations of N. antipodiana belonging to four distinct colour morphs: yellow, yellowish green, and two newly discovered morphs, reddish yellow and white-spotted. The nuclear sequences amplified from females of the four colour morphs were identical. The mitochondrial COI sequences, on the other hand, revealed slightly higher variation by recovering three haplotypes belonging to two different clades. Clade I comprises yellow, yellowish green and reddish yellow morphs from the mainland of Southeast Asia and Java, whereas clade II is restricted to white-spotted morph originating from Borneo. The low genetic divergence between both clades, despite being distinctive, undoubtedly provides new insight into the genetic diversity of this polymorphic species.
Oriental Insects | 1996
K. Surekha; Rosichon Ubaidillah; J. LaSalle
Abstract Oxycantha darwini Surekha & Ubaidillah, a new genus and species of Eulophinae (Hymenoptera: Eulophidae) from Brunei, is described and illustrated.