Rudolf Eibach

QTL ANALYSIS OF PATHOGEN RESISTANCE FACTORS AND RIPENING TIME TRAITS IN A GENETIC MAP FROM GRAPEVINE BREEDING LINE GF.GA-47-42 CROSSED TO 'VILLARD BLANC'

Marker-assisted selection is an important tool of current grapevine breeding which aims to improve cultivars for more sustainable viticulture. Markers genetically linked to traits of interest are hence required. These can be identified by QTL (quantitative trait loci) analysis scanning genetic maps elaborated from controlled crosses for marker genotypes correlating with segregating phenotypes. Major traits of interest are resistances to pathogens like powdery and downy mildew (Erysiphe necator resp. Plasmopara viticola) of leaves and fruits. In addition, phenological traits have recently acquired special attention. Breeders wish to select grapes with a better defined ?window? of ripening time as ripening behavior affects both pathogen susceptibility and fruit quality. Ripening time needs to be considered within the context of the climate change debate. To identify genomic regions carrying loci affecting resistance traits and ripening time we constructed a genetic map using 151 individuals from the cross of grapevine breeding line Gf.GA-47-42 (?Bacchus? × ?Seyval?) with ?Villard blanc? (?Seibel 6468? × ?Subereux?). Both parental lines are resistant to powdery and downy mildew and vary considerably in ?veraison? time as an indicator of ripening. While Gf.GA-47-42 is rather early, ?Villard blanc? exhibits middle to late ?veraison? and this trait segregates clearly in the cross. Linkage/recombination analysis for map construction was based on more than 350 simple sequence repeat (SSR)-derived markers. Many of these loci were newly extracted from the Vitis reference genome sequence of PN40024 (http://www.genoscope.cns.fr/externe/GenomeBrowser/Vitis/). In addition, the mapping included 210 newly developed SNP (single nucleotide polymorphisms) markers. A subset of these was analyzed with two different techniques permitting to assess the reliability of SNP genotyping with both methods. The resulting map was scanned for QTL influencing powdery and downy mildew disease resistance and the time of ?veraison?. Several major QTL were identified.

Genetic Background Selection in Grapevine Breeding exemplified by the Cross `Blaufraenkisch´ x `Catawba´

The project is dealing with the improvement of a universal pneumatic seeder which is suitable for sowing a wide range of different seeds in order to decrease particulate emissions of seed dressings. Aim of the project is to identify leakages in the pneumatic system in order to develop opportunities for the subsequent improvement of existing equipment to fulfill the high demands of user and environmental protection. Pneumatic seeders are characterized by a central, funnelshaped hopper. The batch feeder being an airlock and dosing feeder is located in the outlet of the seeder. The metered seed is fed into the air stream and transported to the sowing distributor by a conveying air stream.Due to climatic change, phenology traits are becoming increasingly important in grapevine breeding, since a premature flowering and ripening time could be observed for grapevine in the last decades. However, knowledge about these traits is still limited as they are genetically very complex and highly influenced by environmental factors. The analysis of the genetic basis of flowering time therefore will enable the development of tightly linked molecular markers useful for markerassisted selection of especially late flowering breeding lines.One recently occurred invasive insect pest has caught the attention for investigating biological control mechanisms and systems: The spotted wing drosophila (SWD, Drosophila suzukii Matsumura) is endemic in East China and Japan but has been introduced to the western hemisphere about 10 years ago and has been found in Europe since 2009. Nowadays, it has emerged to one of the most harmful pests to commercially grown fruit plants like stone fruits and nearly all kind of berries while it prefers ripe and overripe fruits. Our intention is to investigate the possible usage of natural antagonists for biological control. Therefore, we examine the natural load of parasites and pathogens (i.e. fungi, bacteria, viruses, microsporidia and protista) in fruit flies, isolate them and re-infect lab populations of D. suzukii for investigating the antagonistic potential. Furthermore, we will integrate the fruit pest codling moth (Cydia pomonella), which is an ongoing problem in apple orchards also because the pest develops resistance against commercially available insecticides. The long-term aim is to establish a stable system for pathogen detection that can be used for rapid identification of microbial antagonists in natural populations.Two main problems have to be considered in the development of control agents against the Fire Blight pathogen Erwinia amylovora: First, the ability of exponential growth leads to high cell densities in a short amount of time. Second, the most critical phase of Fire Blight infection occurs during blossoming, when the pathogen is transported to open flowers by various insects. To prevent infection, it is important to avoid invasion inside the plants tissue by interfering with growth of E. amylovora cells.The entomopathogenic fungus Isaria fumosorosea, formerly known as Paecilomyces fumosoroseus, has got a relatively wide host range. Within the scope of the EU project BIOCOMES investigations were done to validate the use of I. fumosorosea as a BCA against several pest insects. Under laboratory conditions it could be shown that I. fumosorosea seems to be a suitable BCA against Bemisia tabaci (silverleaf whitefly) and Spodoptera exigua (beet armyworm).Since the last two decades a number of fingerprinting methods have been developed to analyze microbial communities and their dynamics, including Terminal Restriction Fragment Length Polymorphism (T-RFLP), Length Heterogeneity-Polymerase Chain Reaction (LHPCR) and Automated Ribosomal Intergenic Spacer Analysis (ARISA). Because the latter provides a quick and cheap way together with high accuracy, we have chosen this method to investigate the fungal communities on grapevine, wood, leaves and berries.Saoussen Ben Tiba, Andreas Larem, Eva Fritsch, Karin Undorf-Spahn, Asma Laarif, Sami Fattouch, Johannes A. Jehle 1 Julius Kuhn-Institut, Institute for Biological Control, Darmstadt, Germany 2 Regional Center for Agriculture and Biological Agriculture, Chott Meriem, Tunisia 3 National Institute for applied technological Science Tunis (INSAT), Carthage University, Tunisia Email of corresponding author: saoussen.ben.tiba@jki.bund.deOne promising approach to a more environmentally friendly viticulture is growing fungus resistant cultivars with the novel cultivation method of the minimal pruning of trellis trained grapevines (MPTS). This practice reduces the tremendous amounts of fungicides needed to protect traditional cultivars and is expected to increase biodiversity compared to vineyards with traditional trellis trained grapevines (TS).Meiosis as the specialized cell division of sexual reproduction plays a crucial role in the exchange and reorganization of genetic material between two individuals by dividing the chromosome set in half and forming gametes. Even though in the last years major findings in the field of meiosis have been achieved, especially in plants, some key questions remain concealed. For a proper meiosis the initiation of double strand breaks (DSBs) during early prophase I is essential. Without DSBs no physical connection can occur between homologous chromosomes and recombination, pairing, and crossing over are excluded. So far in all analyzed eukaryotes SPO11, a meiosis specific transesterase, is the key enzyme inducing DSBs. But other than in animals and fungi where a single SPO11 is sufficient, plants need at least two different SPO11, referred to as SPO11-1 and SPO11-2, for proper meiosis. In Arabidopsis thaliana both have crucial functions and are essential in a functional form for the induction of meiotic DSBs as single knock out mutants are leading to near sterility by random chromosome distribution. Despite the same function of the homologs SPO111 and -2, the identity between both proteins is quite low. Homology of the orthologous SPO11 from different organisms is much higher. By exchanging SPO11-1 and -2 in Arabidopsis by their orthologs from various organisms we could demonstrate a species specific function of each SPO11, as a functional complementation of sterility could only be achieved with SPO11 from closely related species from the Brassicaceae. By exchanging non conserved regions between SPO11-1 and -2 of Arabidopsis we additionally could show a sequence specific function for each SPO11, as a functional rescue could not be achieved with all chosen regions. Interestingly, we could reveal a specific pattern of aberrant spliced isoforms for each SPO11 which are also sequence as well as species specific. By producing antibodies against AthSPO11-1 and -2 we were able to analyze for the first time the binding of SPO11-2 onto the DNA and perform co-immunolocalization studies with SPO11-1 and -2.European Stone Fruit Yellows (ESFY) is one of the most serious diseases in European fruit production. Infected Prunus cultivars yield poorly and lead to high economic losses. ESFY is caused by a specialized bacterium located in the phloem tissue of Prunus ssp., the Phytoplasma ‘Candidatus Phytoplasma prunorum’. It is spread by the phloemfeeding plum psyllid (Cacopsylla pruni) which acquires the bacterium by feeding on infected plants and is able to transmit it to healthy plants.Leaf rust caused by Puccinia triticina can cause yield losses up to 60 % and is the most common rust disease of wheat in the world. Vertical leaf rust resistance genes (Lr-genes) have been introduced in cultivars. Many of these resistances are broken down by virulent pathotypes. Horizontal resistances which are independent from races of a pathogen are known but show a quantitative characteristic which is carried by a few cultivars.