Rudra Deo Tripathi

Effect of arsenic on growth, oxidative stress, and antioxidant system in rice seedlings ☆

The physiological, biochemical, and proteomic changes in germinating rice seedlings were investigated under arsenic stress. A marked decrease in germination percentage, shoot, and root elongation as well as plant biomass was observed with arsenic treatments, as compared to control, whereas accumulation of arsenic and malondialdehyde (MDA) in seedlings were increased significantly with increasing arsenic concentration (both AsIII and AsV). The up-regulation of some antioxidant enzyme activities and the isozymes of superoxide dismutase (SOD, EC 1.15.1.1), ascorbate peroxidase (APX, EC 1.11.1.11), peroxidase (POD, EC 1.11.1.7), and glutathione reductase (GR, 1.6.4.2) substantiated that arsenic accumulation generated oxidative stress, which was more pronounced in As(III) treatment. We also studied the protective effect of reduced glutathione (GSH) and cysteine (Cys) to As(III)/As(V) stressed seedlings. Both GSH and Cys imparted enhanced tolerance to seedlings against arsenic stress. Seedlings growth improved while level of MDA declined significantly when GSH and Cys were supplemented to As(III)/As(V) treatments suggesting GSH and Cys-mediated protection against oxidative stress. The arsenic content was highest in roots of seedlings grown in As(III) in the presence of GSH/Cys. However, in case of As(V) plus GSH or Cys, the arsenic content in seedlings was highest in shoots. The results are suggestive of differential metabolism of As(III) and As(V) in rice.

Wastewater treatability potential of some aquatic macrophytes: Removal of heavy metals☆

Abstract Free-floating, submerged and emergent plants ( Hydrodictyon reticulatum, Spirodela polyrrhiza, Chara corallina, Ceratophyllum demersum, Vallisneria spiralis, Bacopa monnieri, Alternanthera sessilis and Hygrorrhiza aristata ) were evaluated for their heavy metal (Cu, Cr, Fe, Mn, Cd, Ph) removal potential under laboratory conditions. Treatability study was carried out using pond water contaminated with the effluents from various industrial sources. Plants differ in the extent of metal accumulation; however, metals present in relatively high concentrations were accumulated more. Results showed a decrease in Cr level from 4.866 μM to below maximum permissible limit by C. demersum, H. reticulatum and S. polyrrhiza within 15 d. Similarly, elevated levels of Fe were reduced to below permissible limit by C. demersum and H. reticulatum after 15 d. Manganese concentration (6.63 μM) were reduced to 1.63 p M by C. demersum and H. reticulatum in 7 d. Bacopa monnieri and H. aristata decreased Cd levels from 0.155 μM to 0.009 μM whereas S. polyrrhiza and H. reticulatum reduced levels to 0.036 μM after 15 d of treatment. More than 70% Pb was removed by C. demersum, H. aristata and H. reticulatum within 15 d. Results suggest the use of these plants for metal abatement in dilute wastewaters.

Response of higher plants to lead contaminated environment.

Lead concentration is increasing rapidly in the environment due to increased use of its sources by human society. Alarming concentrations of the metal have been reported in dust of densely populated urban areas and, water and land of various areas near the industrial waste disposals. Plants absorb lead and accumulation of the metal have been reported in roots, stems, leaves, root nodules and seeds etc. which increases with the increase in the exogenous lead level. Lead affects plant growth and productivity and the magnitude of the effects depend upon the plant species. Photosynthesis has been found to be one of the most sensitive plant processes and the effect of the metal is multifacial. Nitrate reduction is inhibited drastically in roots by the metal but in the leaves a differential effect is observed in various cultivars. Lead also inhibits nodulation, N-fixation and ammonium assimilation in the root nodules. It appears that the toxic effect of the metal is primarily at physiological level and provision of certain inorganic salts can antagonize the toxic effects to some extent. Further responses of plants to the metal depend on various endogenous, environmental and nutritional factors. Some plants are able to tolerate excess of Pb+2 by involving processes like exclusion, compartmentalization or synthesizing metal detoxifying peptides-the phytochelatins.

Environmental bioremediation technologies

Bioremediation of Organic and Metal Co-contaminated Environments: Effects of Metal Toxicity, Speciation, and Bioavailability on Biodegradation.- New Bioremediation Technologies to Remove Heavy Metals and Radionuclides using Fe(III)-, Sulfate- and Sulfur- Reducing Bacteria.- Bioremediation of Soils Polluted with Hexavalent Chromium using Bacteria: A Challenge.- Accumulation and Detoxification of Metals by Plants and Microbes.- Role of Phytochelatins in Phytoremediation of Heavy Metals.- Metal Resistance in Plants with Particular Reference to Aluminium.- Bioremediation of Metals: Microbial Processes and Techniques.- Phytoremediation of Metals and Radionuclides.- Nanotechnology for Bioremediation of Heavy Metals.- Biotechnological Approaches to Improve Phytoremediation Efficiency for Environment Contaminants.- Aquatic Plants for Phytotechnology.- Phytomonitoring of Air Pollutants for Environmental Quality Management.- Phytoremediation of Air Pollutants: A Review.- Phytoremediation: Role of Plants in Contaminated Site Management.- The Role of Macrophytes in Nutrient Removal using Constructed Wetlands.- Nitrate Pollution and its Remediation.- Bioremediation of Petroleum Sludge using Bacterial Consortium with Biosurfactant.- Diversity, Biodegradation and Bioremediation of Polycyclic Aromatic Hydrocarbons.- Environmental Applications of Fungal and Plant Systems: Decolourisation of Textile Wastewater and Related Dyestuffs.- Fungal-Based Remediation: Treatment of PCP Contaminated Soil in New Zealand.- Biofilms in Porous Media: Mathematical Modeling and Numerical Simulation.

Recent advances in arsenic accumulation and metabolism in rice

Arsenic is commonly present in subsoil and is a carcinogen in humans. Rice takes up arsenic and it accumulates in different plant parts, including grains, at levels several-fold higher than the soil. In high arsenic regions, rice can contribute substantially to arsenic intake by the human population. Arsenic in rice grains is present in the carcinogenic inorganic or the relatively safer organic (methylated) form. A wide variation is noticed in different rice genotypes with respect to the proportion of arsenic in these forms in grains. Mechanisms involved in arsenic uptake, efflux from roots, loading into xylem, transport, partitioning, arsenate reduction, arsenic sequestration in vacuoles, volatilization from leaves, accumulation in grains etc. are poorly understood. Selection of cultivars accumulating low inorganic arsenic is an important trait to be used by breeders to develop rice varieties safer for cultivation in arsenic-contaminated regions. Systematic efforts have not been made to screen rice genotypes for mining the genes involved in arsenic uptake, transport and accumulation in grains. Identification of rice germplasm with varying arsenic uptake and partitioning, and development of mapping populations with contrasting grain arsenic, are required for association studies and QTL mapping for accelerating rice improvement. Efforts on gene expression profiling, deep transcriptome sequencing, high throughput metabolomics and phenotyping of contrasting arsenic accumulating lines need to be increased to develop strategies for design of safer rice varieties. Network research projects need to be developed along these approaches to accelerate the development of crop varieties safer for farming in arsenic-contaminated environments.

Transcriptomic and metabolomic shifts in rice roots in response to Cr (VI) stress

BackgroundWidespread use of chromium (Cr) contaminated fields due to careless and inappropriate management practices of effluent discharge, mostly from industries related to metallurgy, electroplating, production of paints and pigments, tanning, and wood preservation elevates its concentration in surface soil and eventually into rice plants and grains. In spite of many previous studies having been conducted on the effects of chromium stress, the precise molecular mechanisms related to both the effects of chromium phytotoxicity, the defense reactions of plants against chromium exposure as well as translocation and accumulation in rice remain poorly understood.ResultsDetailed analysis of genome-wide transcriptome profiling in rice root is reported here, following Cr-plant interaction. Such studies are important for the identification of genes responsible for tolerance, accumulation and defense response in plants with respect to Cr stress. Rice root metabolome analysis was also carried out to relate differential transcriptome data to biological processes affected by Cr (VI) stress in rice. To check whether the Cr-specific motifs were indeed significantly over represented in the promoter regions of Cr-responsive genes, occurrence of these motifs in whole genome sequence was carried out. In the background of whole genome, the lift value for these 14 and 13 motifs was significantly high in the test dataset. Though no functional role has been assigned to any of the motifs, but all of these are present as promoter motifs in the Database of orthologus promoters.ConclusionThese findings clearly suggest that a complex network of regulatory pathways modulates Cr-response of rice. The integrated matrix of both transcriptome and metabolome data after suitable normalization and initial calculations provided us a visual picture of the correlations between components. Predominance of different motifs in the subsets of genes suggests the involvement of motif-specific transcription modulating proteins in Cr stress response of rice.

Synthesis of phytochelatins and modulation of antioxidants in response to cadmium stress in Cuscuta reflexa--an angiospermic parasite.

Effect of cadmium on growth, antioxidative enzymes namely catalase, peroxidase, glutathione reductase, level of glutathione and phytochelatin synthesis was investigated in callus and seedlings of Cuscuta reflexa. A time, concentration and tissue dependent response of Cd was observed. Cd inhibited the growth of callus and seedlings by 50% at 300 and 500 micromol/L concentrations, respectively. Shorter exposure of low concentration of Cd led to augmentation of antioxidant activity, both in callus and seedlings, while longer exposure and high concentration of Cd led to a concentration dependent decrease in callus. Analysis of phytochelatin (PC) synthesis in callus and seedlings of C. reflexa revealed both quantitative and qualitative changes. Cd at low concentrations led to synthesis of predominantly PC4, while at higher concentrations, PC3 was the major form being synthesized. Amelioration of antioxidative systems of C. reflexa in response to Cd stress might be playing a protective role, alleviating the damaging effects of ROS, generated during Cd stress. Concomitantly, chelation and sequestering of toxic Cd ions in this parasite was mediated by synthesis of PC. The response to Cd stress shown by this holoparasitic plant was found to be similar to those of non-parasitic plants (hosts).

Lead bioaccumulation potential of an aquatic macrophyte Najas indica are related to antioxidant system.

Plants of Najas indica bioaccumulated significantly higher amounts of Pb (3554 microg g(-1) dw) when, exposed to varying concentrations of Pb(NO(3))(2).This also led to increased malondialdehyde (MDA), electrical conductivity (EC) and H(2)O(2) content. In response to this, the activities of antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APX), guaiacol peroxidase (GPX), catalase (CAT) and glutathione reductase (GR) were elevated along with the induction of various molecular antioxidants including GSH, cysteine, ascorbic acid and proline. Further, Pb exposed plants showed significantly increased cysteine synthase and glutathione-S-transferase activity. Visible symptoms of toxicity were evident at 50 microM after 4d showing chlorosis and fragmentation of leaves with mucilaginous discharge. It seems that bioaccumulated Pb is efficiently tolerated by Najas plants through activation of antioxidant system and thiolic pathways which was evident by the increased biomass up to 10 microM Pb. Therefore, it appears that due to metal tolerance characteristics with high concentration factor these plants can find use in phytoremediation of aquatic system highly contaminated by Pb.

Arsenic tolerances in rice (Oryza sativa) have a predominant role in transcriptional regulation of a set of genes including sulphur assimilation pathway and antioxidant system.

World wide arsenic (As) contamination of rice has raised much concern as it is the staple crop for millions. Four most commonly cultivated rice cultivars, Triguna, IR-36, PNR-519 and IET-4786, of the West Bengal region were taken for a hydroponic study to examine the effect of arsenate (As(V)) and arsenite (As(III)) on growth response, expression of genes and antioxidants vis-à-vis As accumulation. The rice genotypes responded differentially under As(V) and As(III) stress in terms of gene expression and antioxidant defences. Some of the transporters were up-regulated in all rice cultivars at lower doses of As species, except IET-4786. Phytochelatin synthase, GST and γ-ECS showed considerable variation in their expression pattern in all genotypes, however in IET-4786 they were generally down-regulated in higher As(III) stress. Similarly, most of antioxidants such as superoxide dismutase (SOD), ascorbate peroxidase (APX), guaiacol peroxidase (GPX), catalase (CAT), monodehydroascorbate reductase (MDHAR) and dehydroascorbate reductase (DHAR) increased significantly in Triguna, IR-36 and PNR-519 and decreased in IET-4786. Our study suggests that Triguna, IR-36 and PNR-519 are tolerant rice cultivars accumulating higher arsenic; however IET-4786 is susceptible to As-stress and accumulates less arsenic than other cultivars.

Expression of a rice Lambda class of glutathione S-transferase, OsGSTL2, in Arabidopsis provides tolerance to heavy metal and other abiotic stresses.

Global industrial growth has contaminated the soil and water with many hazardous compounds, including heavy metals. These heavy metals are not only toxic to plants but also cause severe human health hazards when leach out into food chain. One of the approaches employed for the decontamination of environment includes identification and overexpression of genes involved in the detoxification mechanism of plants. Glutathione S-transferases (GSTs) are a superfamily of enzymes, principally known for their role in detoxification reactions. Different classes of GSTs have been used to develop plants with improved detoxification mechanism, but not much information is available for Lambda class of GSTs. Here, we studied expression of OsGSTLs in different rice genotypes under arsenic stress. The study suggests differential expression of these genes in arsenic sensitive and tolerant genotypes. Further, the role of one member of Lambda class OsGSTL2 was studied by expressing in heterologous system, Arabidopsis. Transgenic lines developed were analysed for their response to different abiotic stresses including heavy metals. Analysis suggests that OsGSTL2 provides tolerance for heavy metals and other abiotic stresses like cold, osmotic stress and salt. We conclude that OsGSTLs can be utilized for developing plant varieties tolerant to different abiotic stresses including heavy metals.