Rui Yin

Changes of soil microbiological properties caused by land use changing from rice-wheat rotation to vegetable cultivation

A survey was done recently in Jiaxing city of Zhejiang Province in the Yangtze River Delta to compare the differences of soil microbiological properties among paddy soils with different land use including continuous open-field vegetable cultivation (OFVC), plastic-greenhouse vegetable cultivation (PGVC) and traditional rice–wheat rotation (RWR). The soil types included are percolating, permeable and waterlogged paddy soils. The results indicate that the microbial flora was markedly changed as the land use changed for all the three soil types. In continuous vegetable cultivation soils, especially in PGVC soils, the bacteria amounts decreased dramatically, but the fungal and actinomyce amounts increased as compared with RWR soils. The dehydrogenase activities decreased significantly in vegetable soils, especially in PGVC soils as compared with RWR soils. The microbial biomass C and the total phospholipid contents (TPL) in vegetable cultivation soil greatly decreased as compared with RWR soils. Biolog analysis indicated that the kinds of carbon sources that could be metabolized by native microbes in PGVC soils greatly decreased as compared with OFVC soils and RWR soils, revealing that microbial diversity had decreased since land use change. The activities of some soil enzymes including urease, invertase and phosphase were all lower in OFVC soils than those in RWR soils, and those in PGVC soils were the lowest. The degradation of microbiological activities in continuous vegetable cultivation soils, especially in PGVC soils, as compared with RWR soils might have been caused by soil acidification and accumulation of salts due to overuse of both organic and inorganic fertilizers in vegetable cultivation.

Effect of Arbuscular Mycorrhizal Fungal Inoculation on Heavy Metal Accumulation of Maize Grown in a Naturally Contaminated Soil

A pot culture experiment was carried out to study heavy metal (HM) phytoaccumulation from soil contaminated with Cu, Zn, Pb, and Cd by maize (Zea mays L.) inoculated with arbuscular mycorrhizal (AM) fungi (AMF). Two AM fungal inocula—MI containing only one AM fungal strain (Glomus caledonium 90036) and MII consisting of Gigaspora margarita ZJ37, Gigaspora decipens ZJ38, Scutellospora gilmori ZJ39, Acaulospora spp., and Glomus spp.—were applied to the soil under unsterilized conditions. The control received no mycorrhizal inoculation. The maize plants were harvested after 10 wk of growth. MI-treated plants had higher mycorrhizal colonization than MII-treated plants. Both MI and MII increased P concentrations in roots, but not in shoots. Neither MI nor MII had significant effects on shoot or root dry weight (DW). Compared with the control, shoot Cu, Zn, Pb, and Cd concentrations were decreased by MI but increased by MII. Cu, Zn, Pb, and Cd uptake into shoots and roots all increased in MII-treated plants, while in MI-treated plants Cu, Zn, and Pb uptake into shoots and Cd uptake into roots decreased but Cu, Zn, and Pb uptake into roots and Cd into shoots increased. MII was more effective than MI in promoting HM extraction efficiencies. The results indicate that MII can benefit HMphytoextraction and, therefore, show potential in the phytoremediation of HM-contaminated soils.

Land use intensification affects soil microbial populations, functional diversity and related suppressiveness of cucumber Fusarium wilt in China’s Yangtze River Delta

The extent of soil microbial diversity in agricultural soils is critical to the maintenance of soil health and quality. The aim of this study was to investigate the influence of land use intensification on soil microbial diversity and thus the level of soil suppressiveness of cucumber Fusarium wilt. We examined three typical microbial populations, Bacillus spp., Pseudomonas spp. and Fuasarium oxysporum, and bacterial functional diversity in soils from three different land use types in China’s Yangtze River Delta, and related those to suppressiveness of cucumber Fusarium wilt. The land use types were a traditional rice wheat (or rape) rotation land, an open field vegetable land, and a polytunnel greenhouse vegetable land that had been transformed from the above two land use types since 1995. Results generated from the field soils showed similar counts for Bacillus spp. (log 5.87–6.01xa0CFU g−1 dw soil) among the three soils of different land use types, significantly lower counts for Pseudomonas spp. (log 5.44xa0CFU g−1 dw soil) in the polytunnel greenhouse vegetable land whilst significantly lower counts for Fusarium oxysporum (log 3.21xa0CFU g−1 dw soil) in the traditional rice wheat (or rape) rotation land. A significant lower dehydrogenase activity (33.56xa0mg TPF kg−1 dw day−1) was observed in the polytunnel greenhouse vegetable land. Community level physiological profiles (CLPP) of the bacterial communities in soils showed that the average well color development (AWCD) and three functional diversity indices of Shannon index (H′), Simpson index (D) and McIntosh index (U) at 96xa0h incubation in BIOLOG Eco Micro plates were significantly lower in the polytunnel greenhouse vegetable land than in both the traditional rice wheat (or rape) rotation land and the open field vegetable land. A further greenhouse experiment with the air-dried and sieved soils displayed significantly lower plant growth parameters of 10-old cucumber seedlings as well as significantly lower biomass and total fresh fruit yield at the end of harvesting at dayxa070 in the polytunnel greenhouse vegetable soil sources. The percentages of Fusarium wilt plant death were greatly increased in the polytunnel greenhouse vegetable plants, irrespective of being inoculated with or without Fusarium oxysporum f. sp. cucumerinum. Our results could provide a better understanding of the effects of land use intensification on soil microbial population and functional diversity as well as the level of soil suppressiveness of cucumber Fusarium wilt.

Effects of elevated atmospheric CO2 on soil enzyme activities at different nitrogen application treatments

It has been predicted that elevated atmospheric CO2 will increase enzyme activity as a result of CO2-induced carbon entering the soil. The objective of this study was to investigate the effects of elevated atmospheric CO2 on soil enzyme activities under a rice/wheat rotation. This experiment was conducted in Wuxi, Jiangsu, China as part of the China FACE (Free Air Carbon Dioxide Enrichment) Project. Two atmospheric CO2 concentrations (580±60) and (380±40) μmol·mol−1) and three N application treatments (low-150, normal-250 and high-350 kg N · hm−2) were included. Soil samples (0-10 cm) were collected for analysis of β-glucosidase, invertase, urease, acid phosphates and β-glucosaminidase activities. The results revealed that with elevated atmospheric CO2 β-glucosidase activity significantly decreased (P < 0.05) at low N application rates; had no significant effect with a normal N application rate; and significantly increased (P < 0.05) with a high N application rate. For urease activity, at low and normal N application rates (but not high N application rate), elevated atmospheric CO2 significantly increased (P < 0.05) it. With acid phosphatase elevated atmospheric CO2 only had significant higher effects (P < 0.05) at high N application rates. Under different CO2 concentration, effects of N fertilization are also different. Soil β-glucosidase activity at ambient CO2 concentration decreased with N fertilization, while it increased at elevated CO2 concentration. In addition, invertase and acid phosphatase activities at elevated CO2 concentration, significantly increased (P < 0.05) with N treatments, but there was no effect with the ambient CO2 concentration. For urease activity, at ambient CO2 concentration, N fertilization increased it significantly (P < 0.05), whereas at elevated CO2 concentration it was not significant. Additionally, with β-glucosaminidase activity, there were no significant effects from N application. In general, then, elevated atmospheric CO2 increased soil enzyme activity, which may be attributed to the following two factors: (1) elevated atmospheric CO2 led to more plant biomass in the soil, which in turn stimulated soil microbial biomass and activity; and (2) elevated atmospheric CO2 increased plant photosynthesis, thereby increasing plant-derived soil enzymes.

Bacterial Communities in a Buried Ancient Paddy Soil from the Neolithic Age

Abstract An ancient irrigated paddy soil from the Neolithic age was excavated at Chuodunshan Site in the Yangtze River Delta, close to Suzhou, China. The soil organic matter (SOM) content in the prehistoric rice soil is comparable to the average SOM content of present rice soils in this region, but it is about 5 times higher than that in the parent materials. As possible biomarkers to indicate the presence of the prehistoric paddy soil, the bacterial communities were investigated using the techniques of aerobic and anaerobic oligotrophic bacteria enumeration, Biolog analysis, and polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE). The results showed that in the buried soil layers, the prehistoric paddy soil had the largest number of aerobic and anaerobic oligotrophic bacteria, up to 6.12 and 5.86 log cfu g−1 dry soil, respectively. The prehistoric paddy soil displayed better carbon utilization potential and higher functional diversity compared to the parent materials and a prehistoric loess layer. The Shannon index and richness based on DGGE profiles of bacterial 16S rRNA genes were higher in prehistoric paddy soil than those in the prehistoric loess soil. It might be concluded that the prehistoric irrigated rice cultivation accumulated the SOM in plowed soil layer, and thus increased soil bacterial populations, metabolic activity, functional diversity and genetic diversity. Bacterial communities might be considered as the sensitive indicators of the presence of the prehistoric paddy soil in Chinas Yangtze River Delta.

Short-term decomposition of 14C-labelled glucose in a fluvo-aquic soil as affected by lanthanum amendment

In this study, we investigated the effects of lanthanum (La), one of the rare earth elements (REEs), on microbial biomass C as well as the decomposition of 14C-labelled glucose in a fluvo-aquic soil in 28xa0days. The soil was collected from the field plots under maize/wheat rotation in Fengqiu Ecological Experimental Station of Chinese Academy of Sciences, Henan Province, China. Application of La decreased soil microbial biomass C during the experimental period, and there was a negative correlation (Pu2009<u20090.01) between microbial biomass and application rate of La. La increased microbial biomass 14C after 14C glucose addition, and the increase was significant (Pu2009<u20090.05) at the rates of more than 160xa0mg kg−1 soil. La slightly increased 14CO2 evolution at lower rates of application but decreased it at higher rates 1xa0day after 14C glucose addition, while there was no significant effect from daysxa02 to 28. For the cumulative 14CO2 evolution during the incubation of 28xa0days, La slightly increased it at the rates of less than 120xa0mg kg−1 soil, while significantly decreased (Pu2009<u20090.05) it at the rate of 200xa0mg kg−1 soil. The results indicated that agricultural use of REEs such as La in soil could decrease the amount of soil microbial biomass and change the pattern of microbial utilization on glucose C source in a short period.

Arbuscular mycorrhizal fungi alleviate the heavy metal toxicity on sunflower ( Helianthus annuus L.) plants cultivated on a heavily contaminated field soil at a WEEE-recycling site

An 8-week pot experiment was conducted to investigate the growth and responses of sunflower (Helianthus annuus L.) to arbuscular mycorrhizal (AM) fungal inoculations on a heavily heavy metal (HM)-contaminated (H) soil and a lightly HM-enriched (L) soil, both of which were collected from a waste electrical and electronic equipment (WEEE)-recycling site. Compared with the L soil, the H soil induced significantly larger (P<0.05) concentrations of Cd, Cu, Pb, Cr, Zn and Ni in sunflower (except for root Cr and shoot Ni), which impaired the thylakoid lamellar folds in leaves. The biomasses and P concentrations of shoots and roots, as well as the total P acquisitions per pot were all significantly decreased (P<0.05). Both Funneliformis mosseae (Fm) and F. caledonium (Fc) inoculation significantly increased (P<0.05) root mycorrhizal colonization. For the L soil, AM fungal inoculations had no significant effects on the soil-plant system, except for a decrease of soil pH and increases of soil available P and DTPA-extractable Zn concentrations with the Fm-inoculated treatment. For the H soil, however, AM fungal inoculations significantly increased (P<0.05) the biomasses and P concentrations of shoots and roots, as well as the total P acquisitions per pot, and significantly reduced (P<0.05) the concentrations of HMs in shoots (except for Cu and Pb with Fm- and Fc- inoculated treatments, respectively) and alleviated the toxicity symptoms of HMs in thylakoid structure of leaves. AM fungal inoculations in the H soil also significantly increased (P<0.05) the shoot uptake of HMs (except for Cr), and tended to decrease the total concentrations of HMs in soils. This suggests the potential application of AM fungi for both reducing HM stress and promoting phytoextraction of HM-contaminated soils caused by WEEE recycling.

2-bromoethanesulfonate (BES) Enhances Sulfate-reducing Bacterial Population and Dichlorodiphenyltrichloroethane (DDT) Dechlorination in an Anaerobic Paddy Soil

2-bromoethanesulfonate (BES) is a structural analogue of 2-mercaptoethanesulfonic acid (coenzyme M) and often used to specifically inhibit methanogenesis. The role of BES and sulfate on the reductive dechlorination of dichlorodiphenyltrichloroethane (DDT) was compared in an anaerobic soil slurry reactor of sulfate-reducing system in this study. The population of soil sulfate-reducing bacteria (SRB) was markedly decreased under DDT condition compared to DDT-free reactor, while greatly increased by sulfate and slightly increased by BES. However, the dechlorination rate of DDT was the highest in the DDT+BES treatment, followed in order by DDT+Sulfate and the control condition. In the DDT+BES treatment, more than 60% of DDT-Cl was cleaved within 16 weeks, which was about 124% and 369% greater than that in the DDT+Sulfate treatment and under the control condition, respectively. The results suggested that the inhibition of methanogenesis by BES was another pathway to improve sulfate-reducing activity and the related dechlorination rate of DDT in waterlogged soils.