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Featured researches published by Rukmini Kumar.


Shock | 2005

THE ACUTE INFLAMMATORY RESPONSE IN DIVERSE SHOCK STATES

Carson C. Chow; Gilles Clermont; Rukmini Kumar; Claudio Lagoa; Zacharia Tawadrous; David J. Gallo; Binnie Betten; John Bartels; Gregory M. Constantine; Mitchell P. Fink; Timothy R. Billiar; Yoram Vodovotz

A poorly controlled acute inflammatory response can lead to organ dysfunction and death. Severe systemic inflammation can be induced and perpetuated by diverse insults such as the administration of toxic bacterial products (e.g., endotoxin), traumatic injury, and hemorrhage. Here, we probe whether these varied shock states can be explained by a universal inflammatory system that is initiated through different means and, once initiated, follows a course specified by the cellular and molecular mechanisms of the immune and endocrine systems. To examine this question, we developed a mathematical model incorporating major elements of the acute inflammatory response in C57Bl/6 mice, using input from experimental data. We found that a single model with different initiators including the autonomic system could describe the response to various insults. This model was able to predict a dose range of endotoxin at which mice would die despite having been calibrated only in nonlethal inflammatory paradigms. These results show that the complex biology of inflammation can be modeled and supports the hypothesis that shock states induced by a range of physiologic challenges could arise from a universal response that is differently initiated and modulated.


Shock | 2006

IN SILICO MODELS OF ACUTE INFLAMMATION IN ANIMALS

Yoram Vodovotz; Carson C. Chow; John Bartels; Claudio Lagoa; Jose M. Prince; Ryan M. Levy; Rukmini Kumar; Judy Day; Jonathan E. Rubin; Greg Constantine; Timothy R. Billiar; Mitchell P. Fink; Gilles Clermont

ABSTRACT Trauma and hemorrhagic shock elicit an acute inflammatory response, predisposing patients to sepsis, organ dysfunction, and death. Few approved therapies exist for these acute inflammatory states, mainly due to the complex interplay of interacting inflammatory and physiological elements working at multiple levels. Various animal models have been used to simulate these phenomena, but these models often do not replicate the clinical setting of multiple overlapping insults. Mathematical modeling of complex systems is an approach for understanding the interplay among biological interactions. We constructed a mathematical model using ordinary differential equations that encompass the dynamics of cells and cytokines of the acute inflammatory response, as well as global tissue dysfunction. The model was calibrated in C57Bl/6 mice subjected to (1) various doses of lipopolysaccharide (LPS) alone, (2) surgical trauma, and (3) surgery + hemorrhagic shock. We tested the models predictive ability in scenarios on which it had not been trained, namely, (1) surgery ± hemorrhagic shock + LPS given at times after the beginning of surgical instrumentation, and (2) surgery + hemorrhagic shock + bilateral femoral fracture. Software was created that facilitated fitting of the mathematical model to experimental data, as well as for simulation of experiments with various inflammatory challenges and associated variations (gene knockouts, inhibition of specific cytokines, etc.). Using this software, the C57Bl/6-specific model was recalibrated for inflammatory analyte data in CD14−/− mice and was used to elucidate altered features of inflammation in these animals. In other experiments, rats were subjected to surgical trauma ± LPS or to bacterial infection via fibrin clots impregnated with various inocula of Escherichia coli. Mathematical modeling may provide insights into the complex dynamics of acute inflammation in a manner that can be tested in vivo using many fewer animals than has been possible previously.


Journal of Theoretical Biology | 2004

THE DYNAMICS OF ACUTE INFLAMMATION

Rukmini Kumar; Gilles Clermont; Yoram Vodovotz; Carson C. Chow


Critical Care Medicine | 2004

In silico design of clinical trials: A method coming of age

Gilles Clermont; John Bartels; Rukmini Kumar; Greg Constantine; Yoram Vodovotz; Carson C. Chow


Shock | 2007

A mathematical simulation of the inflammatory response to anthrax infection.

Rukmini Kumar; Carson C. Chow; John Bartels; Gilles Clermont; Yoram Vodovotz


Archive | 2005

Mathematical Simulations of Sepsis and Trauma

Yoram Vodovotz; Carson C. Chow; John Bartels; Claudio Lagoa; Rukmini Kumar; Judy Day; Jonathan E. Rubin; Bard Ermentrout; Béatrice Rivière; Ivan Yotov; Gregory M. Constantine; Timothy R. Billiar; Mitchell P. Fink; Gilles Clermont


Journal of Critical Care | 2005

Mathematical models predict the course of the inflammatory response in rats subjected to trauma-hemorrhagic shock and to anti–tumor necrosis factor α therapy in endotoxemia

Claudio Lagoa; Carson C. Chow; John Bartels; A. Barrat; Rukmini Kumar; Judy Day; Jonathan E. Rubin; Greg Constantine; S. Chang; Mitchell P. Fink; Timothy R. Billiar; Gilles Clermont; Yoram Vodovotz


arXiv: Tissues and Organs | 2004

Dynamics of Acute Inflammation

Rukmini Kumar; Gilles Clermont; Yoram Vodovotz; Carson C. Chow


Critical Care | 2004

Predicting the response to therapy from a mathematical model

Gilles Clermont; Rukmini Kumar; J Bartels; Yoram Vodovotz; S Chang; Carson C. Chow


Chest | 2003

Prediction of the Acute Inflammatory Response From A Mathematical Mode

Claudio Lagoa; Gilles Clermont; Rukmini Kumar; John Bartels; Carson C. Chow; Yoram Vodovotz

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Carson C. Chow

National Institutes of Health

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Yoram Vodovotz

University of Pittsburgh

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John Bartels

University of Pittsburgh

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Claudio Lagoa

University of Pittsburgh

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Judy Day

University of Tennessee

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