Ruth Pe Benito
Garvan Institute of Medical Research
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Publication
Featured researches published by Ruth Pe Benito.
BJUI | 2010
Nicolas Doumerc; Carlo Yuen; Richard Savdie; M. Bayzidur Rahman; Kris K. Rasiah; Ruth Pe Benito; Warick Delprado; Jayne Matthews; Anne-Maree Haynes
Study Type – Therapy (case series) Level of Evidence 4
Clinical Cancer Research | 2009
Clay E.S. Comstock; Michael A. Augello; Ruth Pe Benito; Jason Karch; Thai H. Tran; Fransiscus E. Utama; Elizabeth A. Tindall; Ying Wang; Craig J. Burd; Eric M. Groh; Hoa N. Hoang; Graham G. Giles; Gianluca Severi; Vanessa M. Hayes; Brian E. Henderson; Loic Le Marchand; Laurence N. Kolonel; Christopher A. Haiman; Raffaele Baffa; Leonard G. Gomella; Erik S. Knudsen; Hallgeir Rui; Susan M. Henshall; Robert L. Sutherland; Karen E. Knudsen
Purpose: Alternative CCND1 splicing results in cyclin D1b, which has specialized, protumorigenic functions in prostate not shared by the cyclin D1a (full length) isoform. Here, the frequency, tumor relevance, and mechanisms controlling cyclin D1b were challenged. Experimental Design: First, relative expression of both cyclin D1 isoforms was determined in prostate adenocarcinomas. Second, relevance of the androgen axis was determined. Third, minigenes were created to interrogate the role of the G/A870 polymorphism (within the splice site), and findings were validated in primary tissue. Fourth, the effect of G/A870 on cancer risk was assessed in two large case-control studies. Results: Cyclin D1b is induced in tumors, and a significant subset expressed this isoform in the absence of detectable cyclin D1a. Accordingly, the isoforms showed noncorrelated expression patterns, and hormone status did not alter splicing. Whereas G/A870 was not independently predictive of cancer risk, A870 predisposed for transcript-b production in cells and in normal prostate. The influence of A870 on overall transcript-b levels was relieved in tumors, indicating that aberrations in tumorigenesis likely alter the influence of the polymorphism. Conclusions: These studies reveal that cyclin D1b is specifically elevated in prostate tumorigenesis. Cyclin D1b expression patterns are distinct from that observed with cyclin D1a. The A870 allele predisposes for transcript-b production in a context-specific manner. Although A870 does not independently predict cancer risk, tumor cells can bypass the influence of the polymorphism. These findings have major implications for the analyses of D-cyclin function in the prostate and provide the foundation for future studies directed at identifying potential modifiers of the G/A870 polymorphism. (Clin Cancer Res 2009;15(17):5338–49)
BJUI | 2012
Richard Savdie; Lisa G. Horvath; Ruth Pe Benito; K. Rasiah; Anne-Maree Haynes; Mark Chatfield; Jennifer Turner; Warwick Delprado; Susan M. Henshall; Robert L. Sutherland; James G. Kench
Study Type – Prognosis (case series)
Cancer Epidemiology, Biomarkers & Prevention | 2011
James Devaney; Clare Stirzaker; Wenjia Qu; Jenny Z. Song; Aaron L. Statham; Kate I. Patterson; Lisa G. Horvath; Bruce Tabor; Marcel W. Coolen; Toby Hulf; James G. Kench; Susan M. Henshall; Ruth Pe Benito; Anne-Maree Haynes; Regina Mayor; Miquel Angel Peinado; Robert L. Sutherland; Susan J. Clark
Background: Previously, we showed that gene suppression commonly occurs across chromosome 2q14.2 in colorectal cancer, through a process of long-range epigenetic silencing (LRES), involving a combination of DNA methylation and repressive histone modifications. We now investigate whether LRES also occurs in prostate cancer across this 4-Mb region and whether differential DNA methylation of 2q14.2 genes could provide a regional panel of prostate cancer biomarkers. Methods: We used highly sensitive DNA methylation headloop PCR assays that can detect 10 to 25 pg of methylated DNA with a specificity of at least 1:1,000, and chromatin immunoprecipitation assays to investigate regional epigenetic remodeling across 2q14.2 in prostate cancer, in a cohort of 195 primary prostate tumors and 90 matched normal controls. Results: Prostate cancer cells exhibit concordant deacetylation and methylation of histone H3 Lysine 9 (H3K9Ac and H3K9me2, respectively), and localized DNA hypermethylation of EN1, SCTR, and INHBB and corresponding loss of H3K27me3. EN1 and SCTR were frequently methylated (65% and 53%, respectively), whereas INHBB was less frequently methylated. Conclusions: Consistent with LRES in colorectal cancer, we found regional epigenetic remodeling across 2q14.2 in prostate cancer. Concordant methylation of EN1 and SCTR was able to differentiate cancer from normal (P < 0.0001) and improved the diagnostic specificity of GSTP1 methylation for prostate cancer detection by 26%. Impact: For the first time we show that DNA methylation of EN1 and SCTR promoters provide potential novel biomarkers for prostate cancer detection and in combination with GSTP1 methylation can add increased specificity and sensitivity to improve diagnostic potential. Cancer Epidemiol Biomarkers Prev; 20(1); 148–59. ©2011 AACR.
The Prostate | 2011
Po Yee Yip; James G. Kench; K. Rasiah; Ruth Pe Benito; C. Soon Lee; Susan M. Henshall; Robert L. Sutherland; Lisa G. Horvath
Men with positive margins after radical prostatectomy (RP) for localized prostate cancer (PC) have a 40–50% biochemical relapse rate at 5 years. Adjuvant radiotherapy improves biochemical progression‐free and overall survival in men with positive margins, but is associated with increased toxicity. There is an urgent need to identify new prognostic markers to define the group of patients who would benefit from multimodality therapy.
BJUI | 2012
Richard Savdie; James Symons; Daniel Spernat; Carlo Yuen; Ruth Pe Benito; Anne Maree Haynes; Jayne Matthews; K. Rasiah; Raj Jagavkar; Changhong Yu; Gerald Fogarty; Michael W. Kattan; Phillip Brenner; Robert L. Sutherland
Objective • To compare long‐term biochemical control of high‐risk prostate cancer in those men receiving high‐dose rate brachytherapy (HDRB) and radical prostatectomy (RP).
The Prostate | 2014
S. Sutherland; Ruth Pe Benito; Susan M. Henshall; Lisa G. Horvath; James G. Kench
The PI3K pathway plays a significant role in the progression of prostate cancer (PCa) to an advanced stage. Mouse models suggest that the downstream effector molecule of the PI3K pathway, mTOR, is also important in the development of PCa, where it plays a pivotal role in forming precursor lesions such as high grade prostatic intraepithelial neoplasia (HGPIN). This study was conducted to determine the status of phosphorylated‐mTOR (p‐mTOR the activated state of mTOR) across the PCa progression model by looking at expression in normal prostate tissue, proliferative inflammatory atrophy (PIA), HGPIN, and PCa.
Journal of Clinical Oncology | 2010
PoYee Yip; James G. Kench; K. Rasiah; Ruth Pe Benito; Cheok Soon Lee; Susan M. Henshall; R. Sutherland; Lisa G. Horvath
4650 Background: Men with positive margins after radical prostatectomy (RP) for localized prostate cancer (PC) have a 40-50% biochemical relapse rate. Adjuvant radiotherapy after RP improves biochemical progression-free survival in patients with positive surgical margins, extraprostatic extension (EPE) and/or seminal vesicle involvement (SVI) but is associated with a 5-fold increase in bladder and rectal toxicity. There is an urgent need to identify new prognostic markers to better define the group of patients who would benefit from multimodality therapy. Methods: Nuclear b-catenin, membranous secreted frizzled-related protein 4 (sFRP4), AZGP1 and macrophage inhibitory cytokine-1 (MIC-1) have previously been identified as molecular markers of outcome in localized PC by our group. From these previous studies, 186 localized PC cases had positive margins. Using Kaplan-Meier and Cox Proportional Hazards analyses, we assessed the association between these four molecular markers and biochemical relapse in men w...
Journal of Robotic Surgery | 2010
Nicolas Doumerc; Carlo Yuen; Richard Savdie; Md. Bayzidur Rahman; Ruth Pe Benito
The Journal of Urology | 2015
Nicholas Donin; Fang-Ming Deng; Ruth Pe Benito; Jinhua Wang; Jonathan Melamed; Ming Zhou; Herbert Lepor