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Dive into the research topics where Ruud S. Kootte is active.

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Featured researches published by Ruud S. Kootte.


Diabetes, Obesity and Metabolism | 2012

The therapeutic potential of manipulating gut microbiota in obesity and type 2 diabetes mellitus.

Ruud S. Kootte; A. Vrieze; Frits Holleman; Geesje M. Dallinga-Thie; Erwin G. Zoetendal; W.M. de Vos; Albert K. Groen; Joost B. L. Hoekstra; Erik S.G. Stroes; Max Nieuwdorp

Obesity and type 2 diabetes mellitus (T2DM) are attributed to a combination of genetic susceptibility and lifestyle factors. Their increasing prevalence necessitates further studies on modifiable causative factors and novel treatment options. The gut microbiota has emerged as an important contributor to the obesity—and T2DM—epidemic proposed to act by increasing energy harvest from the diet. Although obesity is associated with substantial changes in the composition and metabolic function of the gut microbiota, the pathophysiological processes remain only partly understood. In this review we will describe the development of the adult human microbiome and discuss how the composition of the gut microbiota changes in response to modulating factors. The influence of short‐chain fatty acids, bile acids, prebiotics, probiotics, antibiotics and microbial transplantation is discussed from studies using animal and human models. Ultimately, we aim to translate these findings into therapeutic pathways for obesity and T2DM in humans.


Journal of Hepatology | 2014

Impact of oral vancomycin on gut microbiota, bile acid metabolism, and insulin sensitivity

Anne Vrieze; Carolien Out; Susana Fuentes; Lisanne Jonker; Isaie Reuling; Ruud S. Kootte; Els van Nood; Frits Holleman; Max Knaapen; Johannes A. Romijn; Maarten R. Soeters; Ellen E. Blaak; Geesje M. Dallinga-Thie; Dorien Reijnders; Mariëtte T. Ackermans; Mireille J. Serlie; Filip K. Knop; Jenst J. Holst; Claude van der Ley; Ido P. Kema; Erwin G. Zoetendal; Willem M. de Vos; Joost B. L. Hoekstra; Erik S.G. Stroes; Albert K. Groen; Max Nieuwdorp

BACKGROUND & AIMS Obesity has been associated with changes in the composition and function of the intestinal microbiota. Modulation of the microbiota by antibiotics also alters bile acid and glucose metabolism in mice. Hence, we hypothesized that short term administration of oral antibiotics in humans would affect fecal microbiota composition and subsequently bile acid and glucose metabolism. METHODS In this single blinded randomized controlled trial, 20 male obese subjects with metabolic syndrome were randomized to 7 days of amoxicillin 500 mg t.i.d. or 7 days of vancomycin 500 mg t.i.d. At baseline and after 1 week of therapy, fecal microbiota composition (Human Intestinal Tract Chip phylogenetic microarray), fecal and plasma bile acid concentrations as well as insulin sensitivity (hyperinsulinemic euglycemic clamp using [6,6-(2)H2]-glucose tracer) were measured. RESULTS Vancomycin reduced fecal microbial diversity with a decrease of gram-positive bacteria (mainly Firmicutes) and a compensatory increase in gram-negative bacteria (mainly Proteobacteria). Concomitantly, vancomycin decreased fecal secondary bile acids with a simultaneous postprandial increase in primary bile acids in plasma (p<0.05). Moreover, changes in fecal bile acid concentrations were predominantly associated with altered Firmicutes. Finally, administration of vancomycin decreased peripheral insulin sensitivity (p<0.05). Amoxicillin did not affect any of these parameters. CONCLUSIONS Oral administration of vancomycin significantly impacts host physiology by decreasing intestinal microbiota diversity, bile acid dehydroxylation and peripheral insulin sensitivity in subjects with metabolic syndrome. These data show that intestinal microbiota, particularly of the Firmicutes phylum contributes to bile acid and glucose metabolism in humans. This trial is registered at the Dutch Trial Register (NTR2566).


Best Practice & Research in Clinical Gastroenterology | 2013

Fecal transplant: a safe and sustainable clinical therapy for restoring intestinal microbial balance in human disease?

A. Vrieze; P.F. de Groot; Ruud S. Kootte; M. Knaapen; E. van Nood; Max Nieuwdorp

Recent studies have suggested an association between intestinal microbiota composition and human disease, however causality remains to be proven. With hindsight, the application of fecal transplantation (FMT) does indeed suggest a causal relation between interfering with gut microbiota composition and a resultant cure of several disease states. In this review, we aim to show the available evidence regarding the involvement of intestinal microbiota and human (autoimmune) disease. Moreover, we refer to (mostly case report) studies showing beneficial or adverse effects of fecal transplantation on clinical outcomes in some of these disease states. If these findings can be substantiated in larger randomized controlled double blind trials also implementing gut microbiota composition before and after intervention, fecal transplantation might provide us with novel insights into causally related intestinal microbiota, that might be serve as future diagnostic and treatment targets in human disease.


Journal of Lipid Research | 2015

Effect of open-label infusion of an apoA-I-containing particle (CER-001) on RCT and artery wall thickness in patients with FHA

Ruud S. Kootte; Loek P. Smits; Fleur M. van der Valk; Jean-Louis Dasseux; Constance Keyserling; Ronald Barbaras; John F. Paolini; Raul D. Santos; Theo H. van Dijk; Geesje M. Dallinga-van Thie; Aart J. Nederveen; Willem J. M. Mulder; G. Kees Hovingh; John J. P. Kastelein; Albert K. Groen; Erik S.G. Stroes

Reverse cholesterol transport (RCT) contributes to the anti-atherogenic effects of HDL. Patients with the orphan disease, familial hypoalphalipoproteinemia (FHA), are characterized by decreased tissue cholesterol removal and an increased atherogenic burden. We performed an open-label uncontrolled proof-of-concept study to evaluate the effect of infusions with a human apoA-I-containing HDL-mimetic particle (CER-001) on RCT and the arterial vessel wall in FHA. Subjects received 20 infusions of CER-001 (8 mg/kg) during 6 months. Efficacy was assessed by measuring (apo)lipoproteins, plasma-mediated cellular cholesterol efflux, fecal sterol excretion (FSE), and carotid artery wall dimension by MRI and artery wall inflammation by 18F-fluorodeoxyglucose-positron emission tomography/computed tomography scans. We included seven FHA patients: HDL-cholesterol (HDL-c), 13.8 [1.8–29.1] mg/dl; apoA-I, 28.7 [7.9–59.1] mg/dl. Following nine infusions in 1 month, apoA-I and HDL-c increased directly after infusion by 27.0 and 16.1 mg/dl (P = 0.018). CER-001 induced a 44% relative increase (P = 0.018) in in vitro cellular cholesterol efflux with a trend toward increased FSE (P = 0.068). After nine infusions of CER-001, carotid mean vessel wall area decreased compared with baseline from 25.0 to 22.8 mm2 (P = 0.043) and target-to-background ratio from 2.04 to 1.81 (P = 0.046). In FHA-subjects, CER-001 stimulates cholesterol mobilization and reduces artery wall dimension and inflammation, supporting further evaluation of CER-001 in FHA patients.


Atherosclerosis | 2013

Pro-atherogenic lipid changes and decreased hepatic LDL receptor expression by tocilizumab in rheumatoid arthritis

Aart C. Strang; Radjesh J. Bisoendial; Ruud S. Kootte; Dominik M. Schulte; Geesje M. Dallinga-Thie; Johannes H.M. Levels; Marc R. Kok; Koen Vos; Sander W. Tas; Uwe J. F. Tietge; N Müller; Matthias Laudes; Danielle M. Gerlag; Erik S.G. Stroes; Paul P. Tak

OBJECTIVES Blocking the interleukin-6 pathway by tocilizumab (TCZ) has been associated with changes in the lipoprotein profile, which could adversely impact cardiovascular (CV) risk in patients with rheumatoid arthritis (RA). In the present study, we addressed the effect of TCZ on lipoproteins in both fasting and non-fasting state in RA patients and tested the effect of TCZ on LDL receptor (LDLr) expression in vitro. METHODS Twenty patients with active RA and an inadequate response to TNF blockers received monthly TCZ intravenously. On week 0, 1 and 6 blood was drawn before and after an oral fat load, the lipid profiles and HDL antioxidative capacity were measured. Effects of TCZ on LDLr expression in transfected HepG2 cells were subjected. RESULTS After 6 weeks of TCZ, total cholesterol increased by 22% (4.8 ± 0.9 to 5.9 ± 1.3 mmol/L; p < 0.001), LDLc by 22% (3.0 ± 0.6 to 3.6 ± 0.8 mmol/L; p < 0.001) and HDLc by 17% (1.4 ± 0.4 to 1.7 ± 0.7 mmol/L; p < 0.016). Fasting triglycerides (TG) increased by 48% (1.0 ± 0.4 to 1.4 ± 0.8 mmol/L; p = 0.011), whereas postprandial incremental area under the curve TG increased by 62% (p = 0.002). Lipid changes were unrelated to the change in disease activity or inflammatory markers. No difference in HDL antioxidative capacity was found. In vitro, LDLr expression in cultured liver cells was significantly decreased following TCZ incubation (P < 0.001). CONCLUSIONS TCZ adversely impacts on both LDLc as well as fasting and postprandial TG in patients with RA. The changes in hepatic LDLr expression following TCZ imply that adverse lipid changes may be a direct hepatic effect of TCZ. The net effect of TCZ on CV-morbidity has to be confirmed in future clinical trials.


Clinical Microbiology and Infection | 2013

Obesity, non-alcoholic fatty liver disease, and atherothrombosis: a role for the intestinal microbiota?

M. Knaapen; Ruud S. Kootte; Erwin G. Zoetendal; W.M. de Vos; Geesje M. Dallinga-Thie; Marcel Levi; Erik S.G. Stroes; Max Nieuwdorp

Whereas the association between intestinal microorganisms and health has been widely accepted in the area of infectious disease, recent advances have now implied a role for the intestinal microbiota in human energy balance. In fact, numerous studies support an intricate relationship between the intestinal microbiota and obesity, as well as subsequent insulin resistance and non-alcoholic fatty liver disease. Intestinal microorganisms also seem to be involved in haemostatic tone and atherogenesis. However, as most of the findings stem from observational data, intervention studies in humans using interventions selectively aimed at altering the composition and activity of the intestinal microbiota are crucial to prove causality. If substantiated, this could open the arena for modulation of the intestinal microbiota as a future target in obesity-associated disease, both as a diagnostic test for personalized algorithms and for selective therapeutic strategies.


Journal of the American Heart Association | 2018

Effect of Vegan Fecal Microbiota Transplantation on Carnitine‐ and Choline‐Derived Trimethylamine‐N‐Oxide Production and Vascular Inflammation in Patients With Metabolic Syndrome

Loek P. Smits; Ruud S. Kootte; Evgeni Levin; Andrei Prodan; Susana Fuentes; Erwin G. Zoetendal; Zeneng Wang; Bruce S. Levison; E. Marleen Kemper; Geesje M. Dallinga-Thie; Albert K. Groen; Leo A. B. Joosten; Mihai G. Netea; Erik S.G. Stroes; Willem M. de Vos; Stanley L. Hazen; Max Nieuwdorp

Background Intestinal microbiota have been found to be linked to cardiovascular disease via conversion of the dietary compounds choline and carnitine to the atherogenic metabolite TMAO (trimethylamine‐N‐oxide). Specifically, a vegan diet was associated with decreased plasma TMAO levels and nearly absent TMAO production on carnitine challenge. Methods and Results We performed a double‐blind randomized controlled pilot study in which 20 male metabolic syndrome patients were randomized to single lean vegan‐donor or autologous fecal microbiota transplantation. At baseline and 2 weeks thereafter, we determined the ability to produce TMAO from d6‐choline and d3‐carnitine (eg, labeled and unlabeled TMAO in plasma and 24‐hour urine after oral ingestion of 250 mg of both isotope‐labeled precursor nutrients), and fecal samples were collected for analysis of microbiota composition. 18F‐fluorodeoxyglucose positron emission tomography/computed tomography scans of the abdominal aorta, as well as ex vivo peripheral blood mononuclear cell cytokine production assays, were performed. At baseline, fecal microbiota composition differed significantly between vegans and metabolic syndrome patients. With vegan‐donor fecal microbiota transplantation, intestinal microbiota composition in metabolic syndrome patients, as monitored by global fecal microbial community structure, changed toward a vegan profile in some of the patients; however, no functional effects from vegan‐donor fecal microbiota transplantation were seen on TMAO production, abdominal aortic 18F‐fluorodeoxyglucose uptake, or ex vivo cytokine production from peripheral blood mononuclear cells. Conclusions Single lean vegan‐donor fecal microbiota transplantation in metabolic syndrome patients resulted in detectable changes in intestinal microbiota composition but failed to elicit changes in TMAO production capacity or parameters related to vascular inflammation. Clinical Trial Registration URL: http://www.trialregister.nl. Unique identifier: NTR 4338.


Gastroenterology | 2012

Transfer of Intestinal Microbiota From Lean Donors Increases Insulin Sensitivity in Individuals With Metabolic Syndrome

Anne Vrieze; Els van Nood; Frits Holleman; Jarkko Salojärvi; Ruud S. Kootte; Joep F. W. M. Bartelsman; Geesje M. Dallinga–Thie; Mariëtte T. Ackermans; Mireille J. Serlie; Raish Oozeer; Muriel Derrien; Anne Druesne; Johan E. T. van Hylckama Vlieg; Vincent W. Bloks; Albert K. Groen; Hans G.H.J. Heilig; Erwin G. Zoetendal; Erik S.G. Stroes; Willem M. de Vos; Joost B. L. Hoekstra; Max Nieuwdorp


Cell Metabolism | 2016

Effects of Gut Microbiota Manipulation by Antibiotics on Host Metabolism in Obese Humans: A Randomized Double-Blind Placebo-Controlled Trial

Dorien Reijnders; Gijs H. Goossens; Gerben D. A. Hermes; Evelien P. J. G. Neis; Christina M. van der Beek; Jasper Most; Jens J. Holst; Kaatje Lenaerts; Ruud S. Kootte; Max Nieuwdorp; Albert K. Groen; Steven W.M. Olde Damink; Mark V. Boekschoten; Hauke Smidt; Erwin G. Zoetendal; Cornelis H.C. Dejong; Ellen E. Blaak


Cell Metabolism | 2017

Improvement of Insulin Sensitivity after Lean Donor Feces in Metabolic Syndrome Is Driven by Baseline Intestinal Microbiota Composition

Ruud S. Kootte; Evgeni Levin; Jarkko Salojärvi; Loek P. Smits; Annick V. Hartstra; Shanti D. Udayappan; Gerben D. A. Hermes; Kristien E. Bouter; Annefleur M. Koopen; Jens J. Holst; Filip K. Knop; Ellen E. Blaak; Jing Hua Zhao; Hauke Smidt; Amy C. Harms; Thomas Hankemeijer; Jacques J. Bergman; Hans A. Romijn; Frank G. Schaap; Steven W.M. Olde Damink; Mariëtte T. Ackermans; Geesje M. Dallinga-Thie; Erwin G. Zoetendal; Willem M. de Vos; Mireille J. Serlie; Erik S.G. Stroes; Albert K. Groen; Max Nieuwdorp

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Max Nieuwdorp

VU University Medical Center

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Erwin G. Zoetendal

Wageningen University and Research Centre

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