S. Hepaksoy

AFLP reveals structural details of genetic diversity within cultivated olive germplasm from the Eastern Mediterranean

Amplified fragment length polymorphism (AFLP) analysis was used to assess genetic inter-relationships among olive varieties cultivated in the Eastern Mediterranean Basin. The genotypes sampled included most of the important cultivars from Turkey, Greece and the Middle East and selected genotypes from the Western Mediterranean area. A total of 119 polymorphic markers were generated from five selective primer-pair combinations. The combined data sets generated by just two primer-pairs were adequate to discriminate between all 65 genotypes, while each primer-pair could individually identify up to 64 genotypes. A factorial correspondence analysis (FCA) plot indicated that the cultivars clustered into two relatively modestly defined groups. The first broad group was dominated by cultivars from Turkey but also included genotypes originating from the Middle East (Syria and Lebanon) that collectively formed a tight subcluster. The second group comprised Greek cultivars and those originating from the Western Mediterranean. A significant genetic distance value between Greek and Turkish cultivars was provided by an analysis of molecular variance (amova). There was also evidence of substructure here, with an apparent separation of most Spanish and Italian clones. These findings are in general accordance to previous suggestions of an East-West divergence of olive cultivars, although the dichotomy is less extensive than reported previously and complicated by regional variation within each group.

Suitability of isozyme, RAPD and AFLP markers to assess genetic differences and relatedness among fig (Ficus carica L.) clones

Sarilop is the main and standard cultivar for commercial dried fig (Ficus carica L.) production in Turkey. Eleven of the most promising Sarilop clones and one clone of Sarizeybek, all selected from a former agronomic evaluation, were analysed by three molecular marker techniques, isozymes, RAPDs and AFLPs. The resolution power and the accuracy of these three analytical techniques, in distinguishing among fig clones, were determined. The analysis of five isozyme systems permitted the discrimination between the two cultivars, Sarilop and Sarizeybek. Besides the discrimination between the two fig cultivars, the use of 31 10-mer primers in RAPD analysis allowed splitting the 11 Sarilop clones into two groups of genetic similarity, but not to distinguish between all the clones. The AFLP™ technology showed a much higher multiplex ratio than the RAPD technique (42.4 vs. 6.1) and eight combinations of EcoRI/MseI primers were enough to clearly distinguish between all the Sarilop clones.

Propagation of Ficus carica L. clones by in vitro culture

This experiment is designed to determine the most suitable conditions and media for propagating three selected fig (Ficus carica L.) clones through tissue culture. The clone 37 displayed a higher performance than clones 50 and 82. As the multiplication medium, the Murashige and Skoog (MS) medium containing 1 mg dm−3 α-indole-3-butyric acid (IBA), 1 mg dm−3 gibberellic acid and 5 mg dm−3 6-benzyladenine were the best, whereas, MS medium complemented with 1.2 and 2.5 μM IBA or 1-naphthalene acetic acid (NAA) were better in respect to rooting. Peat followed by volcanic tuff gave the best performance for acclimatization to outdoor conditions.

Grapevine Irrigation with Saline Water: Effect of Rootstocks on Quality and Yield of Cabernet Sauvignon

ABSTRACT The effects of three irrigation salinity levels (1.8, 3.3, and 4.8 dS/m) on ion accumulation and relative turgidity of Cabernet Sauvignon (Vitis vinifea) grapes on ‘Rugerri’ and ‘Salt Creek’ rootstocks were studied in order to introduce more saline water in the Negev Desert of Israel. Leaf samples were taken four times during the summer of 1997 and analyzed for total diffusible ions, which included sodium (Na), calcium (Ca), potassium (K), and magnesium (Mg), and for soluble ions, which included zinc (Zn) and manganese (Mn). Quality and quantity of yield were also measured. The lowest relative turgidity, 0.8, was measured at ECi (electrical conductivity of irrigation water) 4.8 dS/m, which decreased with time to 0.75 for all treatments. The Na/K ratio indicated relative sodium accumulation. It increased fast with time from about 0.1 to 1.4 under high salinity and more slowly, from 0.1 to 0.5, under the low-salinity treatment. Average yield of fresh berries under all treatments (except one) ranged between 8.0 and 8.5 kg/vine under the respective saline and fresh-water irrigation. This difference was not significant, but in view of the first-year experiment this result should be regarded as provisional. The juice quality criteria, as determined by the production of total soluble solids (TSS) pH2, improved from 321 to 288, indicating low acidity under the saline treatment and higher acidity under the non-saline treatment. The ratio of TSS/acidity, which changed slightly from 34 to 32, also indicated a moderate reduction in acidity under saline conditions, especially under the ‘Ruggeri’ rootstock. Thus, it was concluded that (a) by the use of saline water the quality of the berries may be improved, (b) ‘Ruggeri’ rootstock was less affected than ‘Salt Creek’ by salinity in both quantity and quality of yield, and (c) relative sodium (Na) content in the lamina and the petiole increased with time during the growth period while relative turgidity declined, indicating a possible accumulation of toxic ions over time.

Effect of saline conditions on nutritional status and fruit quality of satsuma mandarin cv. Owari

Citrus are grown in subtropical and tropical regions of the world. Mediterranean basin is the main region for citrus growing with irrigation. In the Mediterranean countries, due to the shortages of water, quantity and quality of irrigation water create problems. In Turkey, satsuma mandarins are mainly grown in the western part of the country. Gumuldur-Buyukalan, the main satsuma-growing region in Turkey is threatened by groundwater salination due to seawater intrusion. Citrus species are generally considered as sensitive to salt. Saline irrigation water reduces the vegetative and generative growth of trees, as well as yield and quality. In Buyukalan-Gumuldur/Turkey, 12 satsuma orchards were sampled in 1996 and 1997. The aim of the researchwork was to determine the effect of salinity on fruit quality and to find out its relationship with the nutritional status of the trees. As fruit quality parameters, average fruit weight, total soluble solids (TSS %) titratable acidity (as % citric acid) and Cl content of the fruit juice and crude fibre of the pulp were analysed. In addition, sugar composition was determined by gas chromatography. Sodium, potassium, calcium and chloride contents were analysed in leaf and irrigation water samples. Water samples were taken towards the end of the irrigation period. Leaf samples were taken during the fruit ripening period (end of October). In the statistical evaluation of the results, the effect of salinity on the analysed quality parameters were defined.