Sabir Bin Muzaffar

Migration of Waterfowl in the East Asian Flyway and Spatial Relationship to HPAI H5N1 Outbreaks

Abstract Poyang Lake is situated within the East Asian Flyway, a migratory corridor for waterfowl that also encompasses Guangdong Province, China, the epicenter of highly pathogenic avian influenza (HPAI) H5N1. The lake is the largest freshwater body in China and a significant congregation site for waterfowl; however, surrounding rice fields and poultry grazing have created an overlap with wild waterbirds, a situation conducive to avian influenza transmission. Reports of HPAI H5N1 in healthy wild ducks at Poyang Lake have raised concerns about the potential of resilient free-ranging birds to disseminate the virus. Yet the role wild ducks play in connecting regions of HPAI H5N1 outbreak in Asia is hindered by a lack of information about their migratory ecology. During 2007–08 we marked wild ducks at Poyang Lake with satellite transmitters to examine the location and timing of spring migration and identify any spatiotemporal relationship with HPAI H5N1 outbreaks. Species included the Eurasian wigeon (Anas penelope), northern pintail (Anas acuta), common teal (Anas crecca), falcated teal (Anas falcata), Baikal teal (Anas formosa), mallard (Anas platyrhynchos), garganey (Anas querquedula), and Chinese spotbill (Anas poecilohyncha). These wild ducks (excluding the resident mallard and Chinese spotbill ducks) followed the East Asian Flyway along the coast to breeding areas in northern China, eastern Mongolia, and eastern Russia. None migrated west toward Qinghai Lake (site of the largest wild bird epizootic), thus failing to demonstrate any migratory connection to the Central Asian Flyway. A newly developed Brownian bridge spatial analysis indicated that HPAI H5N1 outbreaks reported in the flyway were related to latitude and poultry density but not to the core migration corridor or to wetland habitats. Also, we found a temporal mismatch between timing of outbreaks and wild duck movements. These analyses depend on complete or representative reporting of outbreaks, but by documenting movements of wild waterfowl, we present ecological knowledge that better informs epidemiological investigations seeking to explain and predict the spread of avian influenza viruses.

Prevalence of marine debris in marine birds from the North Atlantic.

Marine birds have been found to ingest plastic debris in many of the worlds oceans. Plastic accumulation data from necropsies findings and regurgitation studies are presented on 13 species of marine birds in the North Atlantic, from Georgia, USA to Nunavut, Canada and east to southwest Greenland and the Norwegian Sea. Of the species examined, the two surface plungers (great shearwaters Puffinus gravis; northern fulmars Fulmarus glacialis) had the highest prevalence of ingested plastic (71% and 51%, respectively). Great shearwaters also had the most pieces of plastics in their stomachs, with some individuals containing as many of 36 items. Seven species contained no evidence of plastic debris. Reporting of baseline data as done here is needed to ensure that data are available for marine birds over time and space scales in which we see changes in historical debris patterns in marine environments (i.e. decades) and among oceanographic regions.

Victims and vectors: highly pathogenic avian influenza H5N1 and the ecology of wild birds

The emergence of highly pathogenic avian influenza (HPAI) viruses has raised concerns about the role of wild birds in the spread and persistence of the disease. In 2005, an outbreak of the highly pathogenic subtype H5N1 killed more than 6,000 wild waterbirds at Qinghai Lake, China. Outbreaks have continued to periodically occur in wild birds at Qinghai Lake and elsewhere in Central China and Mongolia. This region has few poultry but is a major migration and breeding area for waterbirds in the Central Asian Flyway, although relatively little is known about migratory movements of different species and connectivity of their wetland habitats. The scientific debate has focused on the role of waterbirds in the epidemiology, maintenance and spread of HPAI H5N1: to what extent are they victims affected by the disease, or vectors that have a role in disease transmission? In this review, we summarise the current knowledge of wild bird involvement in the ecology of HPAI H5N1. Specifically, we present details on: (1) origin of HPAI H5N1; (2) waterbirds as LPAI reservoirs and evolution into HPAI; (3) the role of waterbirds in virus spread and persistence; (4) key biogeographic regions of outbreak; and (5) applying an ecological research perspective to studying AIVs in wild waterbirds and their ecosystems.

Avian influenza: An ecological and envolutionary perspective for waterbird scientists

Abstract Highly pathogenic avian influenza (HPAI) type A of the subtype H5N1 has recently spread widely and rapidly across Eurasia, and even to Africa, with deaths of both wild and domestic birds recorded. There are fears that it may soon spread to the Americas. Media accounts, communications from international bodies and national governments, and even some of the professional research literature attributes the spread, in part, to movements of HP strains by migratory birds. The origin of highly pathogenic strains is attributed to mutations, or to reassortment of virus genes from different host species. In this paper we review these hypotheses in light of knowledge about the ecology and evolution of avian influenza, looked at from the viewpoint of its natural reservoir - waterbirds. Our purpose here is to alert waterbird biologists that they have much to contribute to the science of this globally-important issue. New technologies have revealed that the genome of avian influenza contains much variation beyond that recognizable by classical antibody techniques, and have established avian influenza as a rapidly evolving and diversifying lineage. The extensive genetic variability in the viral genome and extensive reassortment within host species suggests that high pathogenicity could repeatedly and independently evolve from low pathogenic ancestors under appropriate selection pressures, such as those in poultry production systems. This makes infection of wild birds by HPAI lineages evolved in poultry a more likely occurrence than the reverse. The available evidence largely fits this model. We make recommendations that will help reduce the incursion of domestically-evolved avian influenza strains into wild populations of birds.

The effects of sampling technique on the ecological characterization of shallow, benthic macroinvertebrate communities in two Newfoundland ponds

The influence of sampling technique on the characterization of benthic macroinvertebrate communities on boulder-cobble substrate in two shallow freshwater ponds was analysed. Sweep-net and rock-bag sampling techniques were used to collect macroinvertebrates from two ponds in Newfoundland, Canada. Abundance and diversity of macroinvertebrates were compared in relation to the nature of the substrate and the technique. The two sampling techniques provided different estimates of diversity and density of the benthos. Neither method truly represented the benthic community as neither collected all taxa and each method typically over- or under-estimated the abundance of taxa. The difficulty of interpreting such data is discussed, with special reference to the rapid assessment of water quality in biomonitoring studies.

Rice Production Systems and Avian Influenza: Interactions between Mixed-Farming Systems, Poultry and Wild Birds

Abstract. Wild waterfowl are the reservoir for avian influenza viruses (AIVs), a family of RNA viruses that may cause mild sickness in waterbirds. Emergence of H5N1, a highly pathogenic avian influenza (HPAI) strain, causing severe disease and mortality in wild birds, poultry and humans, had raised concerns about the role of wild birds in possible transmission of the disease. In this review, the link between rice production systems, poultry production systems, and wild bird ecology is examined to assess the extent to which these interactions could contribute towards the persistence and evolution of HPAI H5N1. The rice (Oryza sativa) and poultry production systems in Asia described, and then migration and movements of wild birds discussed. Mixed farming systems in Asia and wild bird movement and migration patterns create opportunities for the persistence of low pathogenic AIVs in these systems. Nonetheless, there is no evidence of long-term persistence of HPAI viruses (including the H5N1 subtype) in the wild. There are still significant gaps in the understanding of how AIVs circulate in rice systems. A better understanding of persistence of AIVs in rice farms, particularly of poultry origins, is essential in limiting exchange of AIVs between mixed-farming systems, poultry and wild birds.

The endangered forests of Bangladesh: why the process of implementation of the Convention on Biological Diversity is not working

Bangladesh has been a signatory to the Convention on Biological Diversity (CBD) although implementation of the convention has been poor. We independently assessed the extent to which the program of work (POW) of the CBD has been implemented in Bangladesh by carrying out workshops involving local communities, conservation organizations, universities, and government departments involved in forest conservation. Our analyses indicate that there is little or no understanding of the ecosystem approach that is central to the CBD; forestry practices remain primitive and largely ineffective; forest destruction continues at high rates; restoration of degraded forests are minimal; protected areas are small and ineffective; indigenous peoples’ rights are nominal and are outside any legislation; threats to species have been identified, but little is being done to reduce threats; there is no work on pollution and its mitigation; some work has been done to adapt to climate change; the institutional environment does not enable effective implementation of the ecosystem approach; laws and policies are ineffective; institutional capacity is poor; government will is limited or totally lacking; and knowledge base remains poor, although reporting has improved and various strategic plans have been formulated but never implemented. Thus, the implementation of CBD in Bangladesh requires systemic changes in policy at the institutional levels as well as complementary changes in attitudes and avenues of alternate income generation.

Helminths of Murres (Alcidae: Uria spp.): markers of ecological change in the marine environment.

Seabirds are prominent components of the North Atlantic marine environment, and their parasites offer an insight into seabird ecologic interactions. Parasites also provide vital information on historic biogeography of host associations and thus may reveal broad changes in the marine ecosystem. Helminths of Common Murres (Uria aalge) and Thick-billed Murres (Uria lomvia) in the northwest Atlantic marine environment were assessed to determine parasite community composition and changes in their parasite fauna since the 1960s. In total, 623 helminths, representing Digenea, Eucestoda, Nematoda, and Acanthocephala, were recorded from 100 Common and Thick-billed Murres collected from breeding colonies along the coasts of Labrador, Newfoundland, and Greenland. Parasite communities differed from those reported from the 1960s, and over 85% of the specimens were tapeworms (mostly in the genus Alcataenia). The high prevalence (26%) and mean intensity (14.6) of A. longicervica, a Pacific species recorded recently from Newfoundland, indicates that this tapeworm was established in the Atlantic by 2006. Significantly higher A. longicervica prevalence (>53%) and mean intensity (27.3) in the murres from Greenland and in wintering murres compared to murres from breeding colonies in Labrador and Newfoundland suggest a mechanism for the introduction of this species to the Atlantic. Periodic mixing of populations of Thysanoessa species, the euphausiid intermediate host of Alcataenia, occurs along the seas adjacent to the North Pacific and those along the Siberian Arctic. The mixing of infected Thysanoessa likely exposed North Atlantic and Arctic murres, which are geographically isolated from Pacific murres, to this tapeworm. The greater prevalence of A. longicervica in Thick-billed Murres was consistent with diet analyses, which revealed a greater proportion of euphausiids.

The effects of the flood cycle on the diversity and composition of the phytoplankton community of a seasonally flooded Ramsar wetland in Bangladesh

Freshwater wetlands in Bangladesh are strongly influenced by the monsoons and the annual flood cycle has measurable impacts on the abiotic and biotic components of these ecosystems. The northeastern Haor Basin of Bangladesh is particularly rich in seasonally flooded freshwater wetlands that support a wide diversity of flora and fauna. These wetlands are of great importance to the local economy due to the abundance of rich floodplain fisheries. Little is known about the phytoplankton communities of these wetlands that are known to be linked with zooplankton and fish productivity. We investigated the seasonal variation in the diversity and abundance of phytoplankton assemblages in Tanguar Haor, a Ramsar wetland in northeastern Bangladesh during the period of inundation (June–December). A total of 107 genera of phytoplankton representing five classes were recorded. Blooms of Microcystis dominated the phytoplankton community throughout the study period but were particularly acute during the early part of the high water period. Among the Bacillariophyceae, Melosira was the most dominant, reaching bloom proportions early in the high water period. Factor analysis of physicochemical variables separated the flood cycle into four distinct periods: early high water, mid high water, late high water and low water periods. Phase of the flood cycle, nutrient availability, the physicochemical variables combined with the dominance of Microcystis seemed to be important in controlling the abundance, diversity and dynamics of the phytoplankton genera. The abundance of genera of desmids and some Bacillariophyceae is indicative of the relatively unpolluted conditions of Tanguar Haor.

Reproductive Performance of the Socotra Cormorant Phalacrocorax nigrogularis on Siniya Island, United Arab Emirates: Planted Trees Increase Hatching Success

Abstract. The Socotra Cormorant Phalacrocorax nigroogularis is a little studied, regional endemic seabird restricted to the Arabian Gulf region threatened by anthropogenic disturbance. The global population is estimated at 110,000 breeding pairs. The Siniya Island colony, the largest in the United Arab Emirates (∼ 15,500 breeding pairs), was studied during the 2011 breeding season to determine baseline reproductive parameters and the effect of exotic trees on reproductive performance. Mean nesting density was 0.92 nests/m2 and shaded areas had significantly higher density (1.05/m2) compared to unshaded areas (0.75/m2). Mean clutch size was 2.4 eggs/nest and did not differ between shaded and unshaded areas. Mean egg volume was significantly higher in shaded (49.56 cm3) compared to unshaded areas (48.5 cm3). Hatching success was significantly higher in shaded (65.1%) compared to unshaded areas (46.6%). Fledging success was 65.6% and did not differ between shaded and unshaded areas. Chicks crèched under trees soon after leaving their nests and this likely increased fledging success, regardless of whether chicks came from shaded or unshaded areas. Overall reproductive success was 1.7 chicks/nest. Higher egg volumes and hatching success under shaded areas suggest that plantations had a beneficial effect on the cormorants on Siniya Island and could be of conservation value. Further studies are required to determine what habitat features linked with these trees specifically aid in enhancing reproductive performance.