Sadia Qayyum

CRISPR/Cas system: A game changing genome editing technology, to treat human genetic diseases

Genes, are the functional units of heredity that used as an instructors to make proteins either to become the functional or structural part of the cell. Hence, the proteins get more attention because most of the life functions depends on it. Any mutation or alteration in genome sequences results in complete loss of function or formation of abnormal protein which leads to hereditary disorder. Gene therapy on the other hand, used as a remedy, a process that make correction in the gene which is responsible for genomic disorders. The treatment of disease state depends on the understanding of their genetic basis. While, numerous molecular genome editing tools have been developed and are being utilized to translate the abstract of gene therapy into reality, but the problem is still a mystery. The genome editing molecular scissors can be applied to dictate the selected genetic products that can have the therapeutic power. Thus, editing the specific sequences depends on the type of strategies being used by a molecule such is HDR or NHEJ. CRISPR/Cas9 editing technology can use in disease model to study the genitival disorders. One side the CRISPR technology seemed to be extremely accurate but on the other side it has some harmful effects i.e. Cas9 proteins sometimes cuts the similar sequences other than the specific targeted and Off-targeting Sequences etc. Urgent attention and improvement are needed for various implication of CRISPR/Cas9 technology, including the delivery, precision and control over the mention system. This review presents the current scenario of genome editing in vivo and its implications for the future of human genetic disease treatment as well as genome throughput potency.

Sequential extraction procedure for fractionation of Pb and Cr in artificial and contaminated soil

Abstract Metal contamination of soil is due to mining, manufacturing and use of synthetic products (e.g. pesticides, paints, batteries, industrial waste and industrial or domestic sludge) which is a serious environmental problem. Hence, determining chemical forms of metals in soils is important to evaluate their mobility or bioavailability. Both artificial and contaminated soils were sequentially extracted to fractionate metals into the water soluble fraction (WSF), exchangeable fraction (EF), bound to carbonate fraction, bound to metal oxide fraction, organically bound fraction (OBF) and residual fraction (RF). In the case of contaminated soil, Pb and Cr are found to be associated with the carbonate fraction while in artificial soil, Pb bound to WSF and Cr with the Fe/Mn fraction. Chemical properties such as pH, electrical conductivity (EC) and textural classification of concerned soils were also analyzed. Percentage recovery was calculated to check the reliability of processes both in Pb and Cr, and it was found to be more in Cr (66% and 84%) in both artificial and contaminated soil than Pb (5% and 34%) in both soils. Analyses of extracts were carried out by atomic absorption spectrometry (AAS). Results were interpreted in terms of environmental mobility or bioavailability of metals.

Fungal strain Aspergillus flavus F3 as a potential candidate for the removal of lead (II) and chromium (VI) from contaminated soil

Abstract Metal contamination of soil is a serious environmental problem due to mining and use of synthetic products (e.g. pesticides, paints, batteries, and industrial wastes), which are serious threat to human life. The current research is aimed at the remediation of soil contaminated with lead (II) and chromium (VI) using indigenous fungal strains through the comparative study of bioleaching and chemical leaching methods. The removal efficiencies of Pb (II) and Cr (VI) in bioleaching were higher than chemical leaching, where 99% Cr (VI) and 36% Pb (II) were removed by Aspergillus flavus (F3) in bioleaching through the production of approximately 332 mg L-1 malic acid, 213 mg L-1 succinic acid, and 35 mg L-1 citric acid. The removal efficiencies in chemical leaching were 21.30% for Pb (II) and 1.92% for Cr (VI) by malic acid, 29.30% for Pb (II) and 72% for Cr (VI) by succinic acid, 22.21% for Pb (II) and 60.70% for Cr (VI) by citric acid, and 2.20% for Pb (II) and 2.47% for Cr (VI) by oxalic acid. The sequential extraction procedure for Pb (II) and Cr (VI) before and after bioleaching showed that Pb (II) and Cr (VI) mostly bound to stable fractions after bioleaching. Scanning electron microscopy (SEM) with energy-dispersive X-ray analysis (EDX) helped to identify the characteristic changes in the morphology and elemental composition of A. flavus (F3) biomass before and after bioleaching, whereas Fourier transform infrared spectroscopy (FTIR) showed that fungal biomass contain hydroxyl, carboxyl, fatty acids, and amine groups on its surface. The results implied that the fungal strain A. flavus (F3) can be used to remediate soils contaminated with Pb (II) and Cr (VI).