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Dive into the research topics where Sam S. Oh is active.

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Featured researches published by Sam S. Oh.


American Journal of Respiratory and Critical Care Medicine | 2013

Early-Life Air Pollution and Asthma Risk in Minority Children. The GALA II and SAGE II Studies

Katherine K. Nishimura; Joshua M. Galanter; Lindsey A. Roth; Sam S. Oh; Neeta Thakur; Elizabeth A. Nguyen; Shannon Thyne; Harold J. Farber; Denise Serebrisky; Rajesh Kumar; Emerita Brigino-Buenaventura; Adam Davis; Michael LeNoir; Kelley Meade; William Rodriguez-Cintron; Pedro C. Avila; Luisa N. Borrell; Kirsten Bibbins-Domingo; Jose R. Rodriguez-Santana; Śaunak Sen; Fred Lurmann; John R. Balmes; Esteban G. Burchard

RATIONALE Air pollution is a known asthma trigger and has been associated with short-term asthma symptoms, airway inflammation, decreased lung function, and reduced response to asthma rescue medications. OBJECTIVES To assess a causal relationship between air pollution and childhood asthma using data that address temporality by estimating air pollution exposures before the development of asthma and to establish the generalizability of the association by studying diverse racial/ethnic populations in different geographic regions. METHODS This study included Latino (n = 3,343) and African American (n = 977) participants with and without asthma from five urban regions in the mainland United States and Puerto Rico. Residential history and data from local ambient air monitoring stations were used to estimate average annual exposure to five air pollutants: ozone, nitrogen dioxide (NO₂), sulfur dioxide, particulate matter not greater than 10 μm in diameter, and particulate matter not greater than 2.5 μm in diameter. Within each region, we performed logistic regression to determine the relationship between early-life exposure to air pollutants and subsequent asthma diagnosis. A random-effects model was used to combine the region-specific effects and generate summary odds ratios for each pollutant. MEASUREMENTS AND MAIN RESULTS After adjustment for confounders, a 5-ppb increase in average NO₂ during the first year of life was associated with an odds ratio of 1.17 for physician-diagnosed asthma (95% confidence interval, 1.04-1.31). CONCLUSIONS Early-life NO₂ exposure is associated with childhood asthma in Latinos and African Americans. These results add to a growing body of evidence that traffic-related pollutants may be causally related to childhood asthma.


American Journal of Respiratory and Critical Care Medicine | 2013

Childhood Obesity and Asthma Control in the GALA II and SAGE II Studies

Luisa N. Borrell; Elizabeth A. Nguyen; Lindsey A. Roth; Sam S. Oh; Haig Tcheurekdjian; Saunak Sen; Adam Davis; Harold J. Farber; Pedro C. Avila; Emerita Brigino-Buenaventura; Michael LeNoir; Fred Lurmann; Kelley Meade; Denise Serebrisky; William Rodriguez-Cintron; Rajesh Kumar; Jose R. Rodriguez-Santana; Shannon Thyne; Esteban G. Burchard

RATIONALE Obesity is associated with increased asthma morbidity, lower drug responsiveness to inhaled corticosteroids, and worse asthma control. However, most prior investigations on obesity and asthma control have not focused on pediatric populations, considered environmental exposures, or included minority children. OBJECTIVES To examine the association between body mass index categories and asthma control among boys and girls; and whether these associations are modified by age and race/ethnicity. METHODS Children and adolescents ages 8-19 years (n = 2,174) with asthma were recruited from the Genes-environments and Admixture in Latino Americans (GALA II) Study and the Study of African Americans, Asthma, Genes, and Environments (SAGE II). Ordinal logistic regression was used to estimate odds ratios (OR) and their confidence intervals (95% CI) for worse asthma control. MEASUREMENTS AND MAIN RESULTS In adjusted analyses, boys who were obese had a 33% greater chance of having worse asthma control than their normal-weight counterparts (OR, 1.33; 95% CI, 1.04-1.71). However, for girls this association varied with race and ethnicity (P interaction = 0.008). When compared with their normal-weight counterparts, obese African American girls (OR, 0.65; 95% CI, 0.41-1.05) were more likely to have better controlled asthma, whereas Mexican American girls had a 1.91 (95% CI, 1.12-3.28) greater odds of worse asthma control. CONCLUSIONS Worse asthma control is uniformly associated with increased body mass index in boys. Among girls, the direction of this association varied with race/ethnicity.


PLOS Medicine | 2015

Diversity in Clinical and Biomedical Research: A Promise Yet to Be Fulfilled

Sam S. Oh; Joshua M. Galanter; Neeta Thakur; Maria Pino-Yanes; Nicolas E. Barcelo; Marquitta J. White; Danielle M. de Bruin; Ruth M. Greenblatt; Kirsten Bibbins-Domingo; Alan H.B. Wu; Luisa N. Borrell; Chris Gunter; Neil R. Powe; Esteban G. Burchard

Esteban Gonzalez Burchard and colleagues explore how making medical research more diverse would aid not only social justice but scientific quality and clinical effectiveness, too.


Nature Methods | 2016

Sparse PCA corrects for cell type heterogeneity in epigenome-wide association studies

Elior Rahmani; Noah Zaitlen; Yael Baran; Celeste Eng; Donglei Hu; Joshua M. Galanter; Sam S. Oh; Esteban G. Burchard; Eleazar Eskin; James Zou; Eran Halperin

In epigenome-wide association studies (EWAS), different methylation profiles of distinct cell types may lead to false discoveries. We introduce ReFACTor, a method based on principal component analysis (PCA) and designed for the correction of cell type heterogeneity in EWAS. ReFACTor does not require knowledge of cell counts, and it provides improved estimates of cell type composition, resulting in improved power and control for false positives in EWAS. Corresponding software is available at http://www.cs.tau.ac.il/~heran/cozygene/software/refactor.html.


The Journal of Allergy and Clinical Immunology | 2015

Genetic ancestry influences asthma susceptibility and lung function among Latinos.

Maria Pino-Yanes; Neeta Thakur; Christopher R. Gignoux; Joshua M. Galanter; Lindsey A. Roth; Celeste Eng; Katherine K. Nishimura; Sam S. Oh; Hita Vora; Scott Huntsman; Elizabeth A. Nguyen; Donglei Hu; Katherine A. Drake; David V. Conti; Andres Moreno-Estrada; Karla Sandoval; Cheryl A. Winkler; Luisa N. Borrell; Fred Lurmann; Talat Islam; Adam Davis; Harold J. Farber; Kelley Meade; Pedro C. Avila; Denise Serebrisky; Kirsten Bibbins-Domingo; Michael LeNoir; Jean G. Ford; Emerita Brigino-Buenaventura; William Rodriguez-Cintron

BACKGROUND Childhood asthma prevalence and morbidity varies among Latinos in the United States, with Puerto Ricans having the highest and Mexicans the lowest. OBJECTIVE To determine whether genetic ancestry is associated with the odds of asthma among Latinos, and secondarily whether genetic ancestry is associated with lung function among Latino children. METHODS We analyzed 5493 Latinos with and without asthma from 3 independent studies. For each participant, we estimated the proportion of African, European, and Native American ancestry using genome-wide data. We tested whether genetic ancestry was associated with the presence of asthma and lung function among subjects with and without asthma. Odds ratios (OR) and effect sizes were assessed for every 20% increase in each ancestry. RESULTS Native American ancestry was associated with lower odds of asthma (OR = 0.72, 95% CI: 0.66-0.78, P = 8.0 × 10(-15)), while African ancestry was associated with higher odds of asthma (OR = 1.40, 95% CI: 1.14-1.72, P = .001). These associations were robust to adjustment for covariates related to early life exposures, air pollution, and socioeconomic status. Among children with asthma, African ancestry was associated with lower lung function, including both pre- and post-bronchodilator measures of FEV1 (-77 ± 19 mL; P = 5.8 × 10(-5) and -83 ± 19 mL; P = 1.1 x 10(-5), respectively) and forced vital capacity (-100 ± 21 mL; P = 2.7 × 10(-6) and -107 ± 22 mL; P = 1.0 x 10(-6), respectively). CONCLUSION Differences in the proportions of genetic ancestry can partially explain disparities in asthma susceptibility and lung function among Latinos.


The Journal of Allergy and Clinical Immunology | 2012

Effect of secondhand smoke on asthma control among black and Latino children

Sam S. Oh; Haig Tcheurekdjian; Lindsey A. Roth; Elizabeth A. Nguyen; Saunak Sen; Joshua M. Galanter; Adam Davis; Harold J. Farber; Frank D. Gilliland; Rajesh Kumar; Pedro C. Avila; Emerita Brigino-Buenaventura; Rocio Chapela; Jean G. Ford; Michael LeNoir; Fred Lurmann; Kelley Meade; Denise Serebrisky; Shannon Thyne; William Rodriguez-Cintron; Jose R. Rodriguez-Santana; L. Keoki Williams; Luisa N. Borrell; Esteban G. Burchard

BACKGROUND Among patients with asthma, the clinical effect and relative contribution of maternal smoking during pregnancy (in utero smoking) and current secondhand smoke (SHS) exposure on asthma control is poorly documented, and there is a paucity of research involving minority populations. OBJECTIVES We sought to examine the association between poor asthma control and in utero smoking and current SHS exposure among Latino and black children with asthma. METHODS We performed a case-only analysis of 2 multicenter case-control studies conducted from 2008-2010 with similar protocols. We recruited 2481 Latino and black subjects with asthma (ages 8-17 years) from the mainland United States and Puerto Rico. Ordinal logistic regression was used to estimate the effect of in utero smoking and current SHS exposures on National Heart, Lung, and Blood Institute-defined asthma control. RESULTS Poor asthma control among children 8 to 17 years of age was independently associated with in utero smoking (odds ratio [OR], 1.5; 95% CI, 1.1-2.0). In utero smoking through the mother was also associated with secondary asthma outcomes, including early-onset asthma (OR, 1.7; 95% CI, 1.1-2.4), daytime symptoms (OR, 1.6; 95% CI, 1.1-2.1), and asthma-related limitation of activities (OR, 1.6; 95% CI, 1.2-2.2). CONCLUSIONS Maternal smoking while in utero is associated with poor asthma control in black and Latino subjects assessed at 8-17 years of age.


American Journal of Respiratory and Critical Care Medicine | 2013

Socioeconomic Status and Childhood Asthma in Urban Minority Youths. The GALA II and SAGE II Studies

Neeta Thakur; Sam S. Oh; Elizabeth A. Nguyen; Melissa Martin; Lindsey A. Roth; Joshua M. Galanter; Christopher R. Gignoux; Celeste Eng; Adam Davis; Kelley Meade; Michael LeNoir; Pedro C. Avila; Harold J. Farber; Denise Serebrisky; Emerita Brigino-Buenaventura; William Rodriguez-Cintron; Rajesh Kumar; L. Keoki Williams; Kirsten Bibbins-Domingo; Shannon Thyne; Saunak Sen; Jose R. Rodriguez-Santana; Luisa N. Borrell; Esteban G. Burchard

RATIONALE The burden of asthma is highest among socioeconomically disadvantaged populations; however, its impact is differentially distributed among racial and ethnic groups. OBJECTIVES To assess the collective effect of maternal educational attainment, annual household income, and insurance type on childhood asthma among minority, urban youth. METHODS We included Mexican American (n = 485), other Latino (n = 217), and African American (n = 1,141) children (aged 8-21 yr) with and without asthma from the San Francisco Bay Area. An index was derived from maternal educational attainment, annual household income, and insurance type to assess the collective effect of socioeconomic status on predicting asthma. Logistic regression stratified by racial and ethnic group was used to estimate adjusted odds ratios (aOR) and their 95% confidence intervals (CI). We further examined whether acculturation explained the socioeconomic-asthma association in our Latino population. MEASUREMENTS AND MAIN RESULTS In the adjusted analyses, African American children had 23% greater odds of asthma with each decrease in the socioeconomic index (aOR, 1.23; 95% CI, 1.09-1.38). Conversely, Mexican American children have 17% reduced odds of asthma with each decrease in the socioeconomic index (aOR, 0.83; 95% CI, 0.72-0.96) and this relationship was not fully explained by acculturation. This association was not observed in the other Latino group. CONCLUSIONS Socioeconomic status plays an important role in predicting asthma, but has different effects depending on race and ethnicity. Further steps are necessary to better understand the risk factors through which socioeconomic status could operate in these populations to prevent asthma.


American Journal of Public Health | 2007

Promoting Sun Safety Among US Postal Service Letter Carriers: Impact of a 2-Year Intervention

Joni A. Mayer; Donald J. Slymen; Elizabeth J. Clapp; Latrice C. Pichon; Laura Eckhardt; Lawrence F. Eichenfield; John P. Elder; James F. Sallis; Martin A. Weinstock; April Achter; Cynthia Balderrama; Gabriel R. Galindo; Sam S. Oh

OBJECTIVES We examined whether US Postal Service letter carriers who received a sun safety intervention would wear wide-brim hats and sunscreen significantly more often than those who did not receive the intervention. METHODS We used a 2-group randomized design with 2662 evaluation cohort participants from 70 US postal stations. Evaluations were conducted at baseline, 3 months, 1 year, and 2 years. Questionnaire items assessed occupational use of sun-screen and wide-brim hats. The 2-year sun safety intervention included the provision of wide-brim hats, accessible sunscreen, reminders, and 6 educational sessions. RESULTS At the 3-month follow-up evaluations, the odds ratio (OR) for regular sun-screen use was 2.8 times higher among the intervention group than among the control group (95% confidence interval [CI]=2.2, 3.5); at the 2-year follow-up evaluations, the rate was still significantly higher (OR=2.0; 95% CI=1.6, 2.6). Intervention group participants also had significantly higher rates of hat use, with the differences remaining consistent across all follow-ups (OR=2.9; 95% CI=2.3, 3.6). CONCLUSIONS The intervention should be disseminated to postal stations nationwide and possibly to other occupational groups that work outdoors.


JAMA Pediatrics | 2012

Determination of Tobacco Smoke Exposure by Plasma Cotinine Levels in Infants and Children Attending Urban Public Hospital Clinics

Delia Dempsey; Matthew J. Meyers; Sam S. Oh; Elizabeth A. Nguyen; Elena Fuentes-Afflick; Alan H.B. Wu; Peyton Jacob; Neal L. Benowitz

OBJECTIVE To determine the prevalence of secondhand smoke (SHS) exposure among infants and young children who received preventive care at pediatric preventative care clinics associated with an urban public hospital. Cotinine, a metabolite of nicotine, has been used to study SHS exposure in population-based studies of children 3 years of age or older. DESIGN Retrospective study using a convenience sample. SETTING Urban county pediatric primary care clinics in San Francisco, California. PARTICIPANTS A total of 496 infants and children (mean [SD] age, 2.4 [1.9] years). INTERVENTIONS Discarded plasma samples (which were routinely collected for lead screening) were tested, and medical records were reviewed, for SHS exposure. MAIN OUTCOME MEASURE Secondhand smoke exposure based on cotinine plasma level and history of exposure in the medical record. RESULTS Thirteen percent of parents reported that their child was exposed to SHS, yet biochemical testing detected cotinine in 55% of samples, at a geometric mean (SD) of 0.23 (3.55) ng/mL. There were no significant sex or age differences. African American children had much higher mean cotinine levels than did Latino children (multiplicative factor change in cotinine, 6.01 ng/ml [95% Cl, 4.49-8.05 ng/ml] [correction]. CONCLUSION In a city with a low smoking rate (12%) and public smoking bans, we documented 55% exposure among infants and young children, using a plasma biomarker, compared with 13% exposure reported by parents. Because SHS is associated with significant respiratory diseases and parents underreport exposure, routine biochemical screening should be considered as a tool to identify and reduce SHS exposure.


Carcinogenesis | 2010

Associations between NBS1 polymorphisms, haplotypes and smoking-related cancers.

Sungshim Lani Park; Delara Bastani; Binh Y. Goldstein; Shen-Chih Chang; Wendy Cozen; Lin Cai; Carlos Cordon-Cardo; Bao-Guo Ding; Sander Greenland; Na He; Shehnaz K. Hussain; Qingwu Jiang; Yuan-Chin A. Lee; Simin Liu; Ming-Lan Lu; Thomas M. Mack; Jenny T. Mao; Hal Morgenstern; Lina Mu; Sam S. Oh; Allan J. Pantuck; Jeanette C. Papp; Jianyu Rao; Victor E. Reuter; Donald P. Tashkin; Hua Wang; Nai-Chieh Y. You; Shun-Zhang Yu; Jinkou Zhao; Zuo-Feng Zhang

Constituents of tobacco smoke can cause DNA double-strand breaks (DSBs), leading to tumorigenesis. The NBS1 gene product is a vital component in DSB detection and repair, thus genetic variations may influence cancer development. We examined the associations between NBS1 polymorphisms and haplotypes and newly incident smoking-related cancers in three case-control studies (Los Angeles: 611 lung and 601 upper aero-digestive tract (UADT) cancer cases and 1040 controls; Memorial Sloan-Kettering Cancer Center: 227 bladder cancer cases and 211 controls and Taixing, China: 218 esophagus, 206 stomach, 204 liver cancer cases and 415 controls). rs1061302 was associated with cancers of the lung [adjusted odds ratio (OR(adj)) = 1.6, 95% confidence interval (CI): 1.2, 2.4], larynx (OR(adj) = 0.56, 95% CI: 0.32, 0.97) and liver (OR(adj) = 1.7, 95% CI: 1.0, 2.9). Additionally, positive associations were found for rs709816 with bladder cancer (OR(adj) = 4.2, 95% CI: 1.4, 12) and rs1063054 with lung cancer (OR(adj) = 1.6, 95% CI: 1.0, 2.3). Some associations in lung and stomach cancers varied with smoking status. CAC haplotype was positively associated with smoking-related cancers: lung (OR(adj) = 1.7, 95% CI: 1.1, 2.9) and UADT (OR(adj) = 2.0, 95% CI: 1.1, 3.7), specifically, oropharynx (OR(adj) = 2.1, 95% CI: 1.0, 4.2) and larynx (OR(adj) = 4.8, 95% CI: 1.7, 14). Bayesian false-discovery probabilities were calculated to assess Type I error. It appears that NBS1 polymorphisms and haplotypes may be associated with smoking-related cancers and that these associations may differ by smoking status. Our findings also suggest that single-nucleotide polymorphisms located in the binding region of the MRE-RAD50-NBS1 complex or microRNA targeted pathways may influence tumor development. These hypotheses should be further examined in functional studies.

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Celeste Eng

University of California

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Harold J. Farber

Baylor College of Medicine

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Donglei Hu

University of California

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Luisa N. Borrell

City University of New York

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Rajesh Kumar

Children's Memorial Hospital

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