Samantha McBride
Rensselaer Polytechnic Institute
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Publication
Featured researches published by Samantha McBride.
Journal of Physical Chemistry B | 2015
Samantha McBride; Christopher F. Tilger; Sean P. Sanford; Peter M. Tessier; Amir Hirsa
A diverse range of proteins can assemble into amyloid fibrils, a process that generally results in a loss of function and an increase in toxicity. The occurrence and rate of conversion is strongly dependent on several factors including molecular structure and exposure to hydrodynamic forces. To investigate the origins of shear-induced enhancement in the rate of fibrillization, a stable rotating Couette flow was used to evaluate the kinetics of amyloid formation under uniform shear for two similar insulin species (human and bovine) that demonstrate unique fibrillization kinetics. The presence of shear-induced nuclei predicted by previous studies is supported by observations of a lag between the consumption of soluble insulin and the precipitation of amyloid aggregates. The apparent fibrillization rate generally increases with shear. However, a two-parameter kinetic model revealed that the nucleation rate has a maximum value at intermediate shear rates. The fibril elongation rate increases monotonically with shear and is similar for both insulin variants, suggesting that increased elongation rates are related to mixing. Differences between human and bovine insulin kinetics under shear are attributable to the nucleation step.
Soft Matter | 2016
Samantha McBride; Sean P. Sanford; J. M. Lopez; Amir Hirsa
Agitation of protein is known to induce deleterious effects on protein stability and structure, with extreme agitation sometimes resulting in complete aggregation into amyloid fibrils. Many mechanisms have been proposed to explain how protein becomes unstable when subjected to flow, including alignment of protein species, shear-induced unfolding, simple mixing, or fragmentation of existing fibrils to create new seeds. Here a shearing flow was imposed on a solution of monomeric human insulin via a rotating Couette device with a small hydrophobic fluid interface. The results indicate that even very low levels of shear are capable of accelerating amyloid fibril formation. Simulations of the flow suggest that the shear enhances fibrillization kinetics when flow inertia is non-negligible and the resulting meridional circulation allows for advection of bulk protein to the hydrophobic interface.
Microgravity Science and Technology | 2017
Shreyash Gulati; Aditya Raghunandan; Fayaz Rasheed; Samantha McBride; Amir Hirsa
Soft Matter | 2017
Vignesh S. Balaraj; Philip C. H. Zeng; Sean P. Sanford; Samantha McBride; Aditya Raghunandan; J. M. Lopez; Amir Hirsa
Bulletin of the American Physical Society | 2017
Samantha McBride; Susmita Dash; Sami Khan; Kripa K. Varanasi
70th Annual Meeting of the APS Division of Fluid Dynamics | 2017
Samantha McBride; Susmita Dash; Sami Khan; Kripa K. Varanasi
Bulletin of the American Physical Society | 2016
Samantha McBride; Susmita Dash; Kripa K. Varanasi
69th Annual Meeting of the APS Division of Fluid Dynamics | 2016
Samantha McBride; Susmita Dash; Kripa K. Varanasi
Bulletin of the American Physical Society | 2015
Samantha McBride; Sean P. Sanford; Juan M. López; Amir Hirsa
Bulletin of the American Physical Society | 2015
Vignesh S. Balaraj; Samantha McBride; Amir Hirsa; Juan M. López