Sami Siljamaki
Varian Medical Systems
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Featured researches published by Sami Siljamaki.
Medical Physics | 2006
Ann Van Esch; Laura Tillikainen; Jukka Pyykkonen; Mikko Tenhunen; Hannu Helminen; Sami Siljamaki; Jyrki Alakuijala; Marta Paiusco; Mauro Iori; Dominique Huyskens
The analytical anisotropic algorithm (AAA) was implemented in the Eclipse (Varian Medical Systems) treatment planning system to replace the single pencil beam (SPB) algorithm for the calculation of dose distributions for photon beams. AAA was developed to improve the dose calculation accuracy, especially in heterogeneous media. The total dose deposition is calculated as the superposition of the dose deposited by two photon sources (primary and secondary) and by an electron contamination source. The photon dose is calculated as a three-dimensional convolution of Monte-Carlo precalculated scatter kernels, scaled according to the electron density matrix. For the configuration of AAA, an optimization algorithm determines the parameters characterizing the multiple source model by optimizing the agreement between the calculated and measured depth dose curves and profiles for the basic beam data. We have combined the acceptance tests obtained in three different departments for 6, 15, and 18MV photon beams. The accuracy of AAA was tested for different field sizes (symmetric and asymmetric) for open fields, wedged fields, and static and dynamic multileaf collimation fields. Depth dose behavior at different source-to-phantom distances was investigated. Measurements were performed on homogeneous, water equivalent phantoms, on simple phantoms containing cork inhomogeneities, and on the thorax of an anthropomorphic phantom. Comparisons were made among measurements, AAA, and SPB calculations. The optimization procedure for the configuration of the algorithm was successful in reproducing the basic beam data with an overall accuracy of 3%, 1mm in the build-up region, and 1%, 1mm elsewhere. Testing of the algorithm in more clinical setups showed comparable results for depth dose curves, profiles, and monitor units of symmetric open and wedged beams below dmax. The electron contamination model was found to be suboptimal to model the dose around dmax, especially for physical wedges at smaller source to phantom distances. For the asymmetric field verification, absolute dose difference of up to 4% were observed for the most extreme asymmetries. Compared to the SPB, the penumbra modeling is considerably improved (1%, 1mm). At the interface between solid water and cork, profiles show a better agreement with AAA. Depth dose curves in the cork are substantially better with AAA than with SPB. Improvements are more pronounced for 18MV than for 6MV. Point dose measurements in the thoracic phantom are mostly within 5%. In general, we can conclude that, compared to SPB, AAA improves the accuracy of dose calculations. Particular progress was made with respect to the penumbra and low dose regions. In heterogeneous materials, improvements are substantial and more pronounced for high (18MV) than for low (6MV) energies.
Physics in Medicine and Biology | 2008
L Tillikainen; H Helminen; T Torsti; Sami Siljamaki; J Alakuijala; J Pyyry; W Ulmer
In this work, a novel three-dimensional superposition algorithm for photon dose calculation is presented. The dose calculation is performed as a superposition of pencil beams, which are modified based on tissue electron densities. The pencil beams have been derived from Monte Carlo simulations, and are separated into lateral and depth-directed components. The lateral component is modeled using exponential functions, which allows accurate modeling of lateral scatter in heterogeneous tissues. The depth-directed component represents the total energy deposited on each plane, which is spread out using the lateral scatter functions. Finally, convolution in the depth direction is applied to account for tissue interface effects. The method can be used with the previously introduced multiple-source model for clinical settings. The method was compared against Monte Carlo simulations in several phantoms including lung- and bone-type heterogeneities. Comparisons were made for several field sizes for 6 and 18 MV energies. The deviations were generally within (2%, 2 mm) of the field central axis d(max). Significantly larger deviations (up to 8%) were found only for the smallest field in the lung slab phantom for 18 MV. The presented method was found to be accurate in a wide range of conditions making it suitable for clinical planning purposes.
Physics in Medicine and Biology | 2007
L Tillikainen; Sami Siljamaki; Hannu Helminen; Jyrki Alakuijala; J Pyyry
Accurate modelling of the radiation output of a medical linear accelerator is important for radiotherapy treatment planning. The major challenge is the adjustment of the model to a specific treatment unit. One approach is to use a multiple-source model containing a set of physical parameters. In this work, the parameters were derived from standard beam data measurements using optimization methods. The source model used includes sub-sources for bremsstrahlung radiation from the target, extra-focal photon radiation and electron contamination. The cost function includes a gamma error measure between measurements and current dose calculations. The procedure was applied to six beam data sets (6 MV to 23 MV) measured with accelerators from three vendors, but the results focus primarily on Varian accelerators. The obtained average gamma error (1%, 1 mm) between dose calculations and measurements used in optimization was smaller than 0.7 for each studied treatment beam and field size, and a minimum of 83% of measurement points passed the gamma < 1 criterion. For experiments made at different SSDs and for asymmetric fields, the average gamma errors were smaller than 1.1. For irregularly shaped MLC apertures, the differences in point doses were smaller than 1.0%. This work demonstrates that the source model parameters can be automatically derived from simple measurements using optimization methods. The developed procedure is applicable to a wide range of accelerators, and has an acceptable accuracy and processing time.
Medical Physics | 2015
Y Li; Perttu Niemela; Li Liao; Shengpeng Jiang; Heng Li; F Poenisch; X. Ronald Zhu; Sami Siljamaki; Reynald Vanderstraeten; Narayan Sahoo; M Gillin; Xiaodong Zhang
PURPOSE To develop a new robust optimization strategy for intensity-modulated proton therapy as an important step in translating robust proton treatment planning from research to clinical applications. METHODS In selective robust optimization, a worst-case-based robust optimization algorithm is extended, and terms of the objective function are selectively computed from either the worst-case dose or the nominal dose. Two lung cancer cases and one head and neck cancer case were used to demonstrate the practical significance of the proposed robust planning strategy. The lung cancer cases had minimal tumor motion less than 5 mm, and, for the demonstration of the methodology, are assumed to be static. RESULTS Selective robust optimization achieved robust clinical target volume (CTV) coverage and at the same time increased nominal planning target volume coverage to 95.8%, compared to the 84.6% coverage achieved with CTV-based robust optimization in one of the lung cases. In the other lung case, the maximum dose in selective robust optimization was lowered from a dose of 131.3% in the CTV-based robust optimization to 113.6%. Selective robust optimization provided robust CTV coverage in the head and neck case, and at the same time improved controls over isodose distribution so that clinical requirements may be readily met. CONCLUSIONS Selective robust optimization may provide the flexibility and capability necessary for meeting various clinical requirements in addition to achieving the required plan robustness in practical proton treatment planning settings.
Medical Physics | 2015
Y Li; Perttu Niemela; Li Liao; Shengpeng Jiang; Heng Li; F Poenisch; X Zhu; Sami Siljamaki; Reynald Vanderstraeten; Narayan Sahoo; M Gillin; Xiaodong Zhang
PURPOSE To develop a new robust optimization strategy for intensity-modulated proton therapy as an important step in translating robust proton treatment planning from research to clinical applications. METHODS In selective robust optimization, a worst-case-based robust optimization algorithm is extended, and terms of the objective function are selectively computed from either the worst-case dose or the nominal dose. Two lung cancer cases and one head and neck cancer case were used to demonstrate the practical significance of the proposed robust planning strategy. The lung cancer cases had minimal tumor motion less than 5 mm, and, for the demonstration of the methodology, are assumed to be static. RESULTS Selective robust optimization achieved robust clinical target volume (CTV) coverage and at the same time increased nominal planning target volume coverage to 95.8%, compared to the 84.6% coverage achieved with CTV-based robust optimization in one of the lung cases. In the other lung case, the maximum dose in selective robust optimization was lowered from a dose of 131.3% in the CTV-based robust optimization to 113.6%. Selective robust optimization provided robust CTV coverage in the head and neck case, and at the same time improved controls over isodose distribution so that clinical requirements may be readily met. CONCLUSIONS Selective robust optimization may provide the flexibility and capability necessary for meeting various clinical requirements in addition to achieving the required plan robustness in practical proton treatment planning settings.
Journal of Applied Clinical Medical Physics | 2017
Liyong Lin; Sheng Huang; Minglei Kang; Petri Hiltunen; Reynald Vanderstraeten; Jari Lindberg; Sami Siljamaki; T Wareing; Ian Davis; Allen Barnett; John McGhee; Charles B. Simone; Timothy D. Solberg; J McDonough; C Ainsley
&NA; AcurosPT is a Monte Carlo algorithm in the Eclipse 13.7 treatment planning system, which is designed to provide rapid and accurate dose calculations for proton therapy. Computational run‐time in minimized by simplifying or eliminating less significant physics processes. In this article, the accuracy of AcurosPT was benchmarked against both measurement and an independent MC calculation, TOPAS. Such a method can be applied to any new MC calculation for the detection of potential inaccuracies. To validate multiple Coulomb scattering (MCS) which affects primary beam broadening, single spot profiles in a Solidwater® phantom were compared for beams of five selected proton energies between AcurosPT, measurement and TOPAS. The spot Gaussian sigma in AcurosPT was found to increase faster with depth than both measurement and TOPAS, suggesting that the MCS algorithm in AcurosPT overestimates the scattering effect. To validate AcurosPT modeling of the halo component beyond primary beam broadening, field size factors (FSF) were compared for multi‐spot profiles measured in a water phantom. The FSF for small field sizes were found to disagree with measurement, with the disagreement increasing with depth. Conversely, TOPAS simulations of the same FSF consistently agreed with measurement to within 1.5%. The disagreement in absolute dose between AcurosPT and measurement was smaller than 2% at the mid‐range depth of multi‐energy beams. While AcurosPT calculates acceptable dose distributions for typical clinical beams, users are cautioned of potentially larger errors at distal depths due to overestimated MCS and halo implementation.
Medical Physics | 2005
Sami Siljamaki; L Tillikainen; Hannu Helminen; J Pyyry
Purpose: To determine the parameters of a multiple‐source model for an arbitrary linear accelerator using optimization methods.Method and Materials: A multiple‐source model describing the energy fluence output of a linear accelerator was developed in this study. A point source modeled radiation from the target, a finite‐size source all extra‐focal radiation, and an electron sourcecontaminant particles. The parameters determined were the mean energy curve (for off‐axis softening), intensity profile curve (for non‐uniform photon energy fluence), electron source values, extra‐focal source size, energy, and intensity. The parameters were optimized by minimizing the gamma error between the dose calculation results and the beam data measurements by applying a non‐linear optimization technique not requiring gradient information. The dose was calculated by an algorithm based on superposition/convolution of Monte Carlo determined scatter kernels. The beam data measurements required were depth dose curves, lateral profiles, and diagonal profiles for multiple field sizes. The model requires minimal data about the internal dimensions and construction of the accelerator head. Results: The method was applied to 231 realistic data sets of varying quality and consistency for Elekta, Siemens and Varian accelerators. The gamma error (1%, 3 mm) for an average optimized model was lower than 1.0 for 98% of the measurement points. Typical duration of the optimization to derive the model parameters was 5–15 minutes. In cases where the measurements contained inconsistencies, the resulting gamma errors were significant, which indicates that the method could be useful in quality assurance of measurement data. Conclusion: This study demonstrated that the parameters for a multiple‐source model can be determined in an efficient and stable manner using optimization methods. The model is applicable to an arbitrary accelerator and has clinically acceptable accuracy and execution time. Conflict of Interest: This work was supported by Varian Medical Systems.
Medical Physics | 2016
Liyong Lin; Sheng Huang; Minglei Kang; C Ainsley; P Hiltunen; Reynald Vanderstraeten; Jari Lindberg; Sami Siljamaki; T Wareing; Ian Davis; Allen Barnett; John McGhee; Timothy D. Solberg; J McDonough; Charles B. Simone
PURPOSE Eclipse proton Monte Carlo AcurosPT 13.7 was commissioned and experimentally validated for an IBA dedicated PBS nozzle in water. Topas 1.3 was used to isolate the cause of differences in output and penumbra between simulation and experiment. METHODS The spot profiles were measured in air at five locations using Lynx. PTW-34070 Bragg peak chamber (Freiburg, Germany) was used to collect the relative integral Bragg peak for 15 proton energies from 100 MeV to 225 MeV. The phase space parameters (σx, σθ, ρxθ) number of protons per MU, energy spread and calculated mean energy provided by AcurosPT were identically implemented into Topas. The absolute dose, profiles and field size factors measured using ionization chamber arrays were compared with both AcurosPT and Topas. RESULTS The beam spot size, σx, and the angular spread, σθ, in air were both energy-dependent: in particular, the spot size in air at isocentre ranged from 2.8 to 5.3 mm, and the angular spread ranged from 2.7 mrad to 6 mrad. The number of protons per MU increased from ∼9E7 at 100 MeV to ∼1.5E8 at 225 MeV. Both AcurosPT and TOPAS agree with experiment within 2 mm penumbra difference or 3% dose difference for scenarios including central axis depth dose and profiles at two depths in multi-spot square fields, from 40 to 200 mm, for all the investigated single-energy and multi-energy beams, indicating clinically acceptable source model and radiation transport algorithm in water. CONCLUSION By comparing measured data and TOPAS simulation using the same source model, the AcurosPT 13.7 was validated in water within 2 mm penumbra difference or 3% dose difference. Benchmarks versus an independent Monte Carlo code are recommended to study the agreement in output, filed size factors and penumbra differences. This project is partially supported by the Varian grant under the master agreement between University of Pennsylvania and Varian.
Medical Physics | 2006
Sami Siljamaki; L Tillikainen; Hannu Helminen; K Pesola; W Volken; D Frei
Purpose:Monte Carlo methods for photons are slowly becoming available for normal clinical use. Especially for dynamic or otherwise complex fields Monte Carlo methods can be superior to traditional methods. The time to compute a Monte Carlo dose distribution up to a given accuracy is nearly independent of the complexity of the whole plan. Instead, traditional methods usually require computation time directly proportional to the complexity of the treatment. In this work, VMC++ (Voxel Monte Carlo, National Research Council, Canada) algorithm for fields with dynamic beam modifiers has been implemented. Method and Materials: A Monte Carlo implementation of an accelerator head model for dynamic fields is presented. Cases studied include dynamic wedges, sliding window IMRT fields, and complex arc fields. Except for dynamic wedges, the transport through the relevant components is modeled using VMC++. Tongue‐and‐groove, air cavities, divergent leafs, and rounded leaf tips in a multi‐leaf collimator are taken into account. In the case of dynamic wedges the jaws are modeled as impenetratable blocks. The final patient dose calculation is also done using VMC++ algorithm. Results: Results are presented for each of the dynamic components by comparing the Monte Carlo calculated data to measurements. The agreement is excellent in all cases. The calculation time varies from a few minutes to a few hours, depending on the required accuracy and target volume. Conclusion:Monte Carlo is shown to be a very competitive alternative for traditional methods in modeling accessories, especially for dynamic treatments. The results of the corresponding dose calculation match very well with measured beam data. In addition, the obtained execution times are suitable for routine clinical use. Conflict of Interest: This work has been funded by Varian Medical Systems Inc.
Medical Physics | 2006
Katja Marika Pesola; Jyrki Alakuijala; Hannu Helminen; Sami Siljamaki
Purpose: The goal of beam angle optimization in external radiation therapytreatment planning is to find field directions which shall result in an optimal treatment plan. In this work, a beam angle optimization algorithm to be used in Intensity Modulated Radiation Therapy(IMRT)treatment planning has been developed. Method and Materials: The plan optimality is defined by constraints set on the Dose‐Volume Histogram (DVH) of the target(s) and of the critical organs. The same constraints may be applied both in beam angle and in beam profile (beamlet) optimization. In beam angle optimization, either a co‐planar or a non‐coplanar initial search space may be used. The search space is covered with a preset number of uniformly distributed fields. Thereafter, a few beamlet optimization iterations are calculated in order to produce optimal beam profiles. Each field is then removed from the plan, and the corresponding value of the objective function is calculated. The fields with a low importance value are thereafter removed. The process is continued until the desired number of fields in the plan has been reached. Results: The optimized plans have been compared with equispaced beams, class solution —based plans and manually made plans. Beam angle optimization has been found to decrease the OF value typically to 20–80 % of the original value calculated with reference plans. The improvement has been clearly visible also in the shape of the DVH curves. The algorithm has been designed to execute fast (less than 30 minutes) in order to be applicable in routine use for patient‐specific planning. Conclusion: The new beam angle optimization algorithm has been able to produce IMRT plans with superior quality to class solution or manually made plans. Conflict of Interest: This work has been funded by Varian Medical Systems Inc.