Samo Begus
University of Ljubljana
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Featured researches published by Samo Begus.
Biomedical Signal Processing and Control | 2014
Jure Kranjec; Samo Begus; Gregor Geršak; Janko Drnovšek
Abstract The following paper investigates published work on non-contact human physiological parameter measurement, more precisely measurement of the human heart rate (HR) and consequently the heart rate variability (HRV), which is considered to be an important marker of autonomic nervous system activity proven to be predictive of the likelihood of future health related events. The ability to perform measurements of cardiac activity in a non-contact manner could prove to become an important alternative to the conventional methods in the clinical field as well as in the more commercially oriented fields. Some of the published work so far indicates that the measurement of cardiac activity in a non-contact manner is indeed possible and in some cases also very precise, however there are several limitations to the methods which need to be taken into account when performing the measurements. The following paper includes a short description of the two conventional methods, electrocardiogram (ECG) and photoplethysmography (PPG), and later on focuses on the novel methods of non-contact measuring of HR with capacitively coupled ECG, Doppler radar, optical vibrocardiography, thermal imaging, RGB camera and HR from speech. Our study represents a comparative review of these methods while emphasising their advantages and disadvantages.
IEEE Transactions on Instrumentation and Measurement | 2014
Jure Kranjec; Samo Begus; Janko Drnovšek; Gregor Geršak
The following paper investigates four novel methods for noncontact measurement of heart rate (HR) and consequently its derivate HR variability, an important marker of autonomic activity proven to be predictive of likelihood of future health related events. Feasibility study of basic principles is focused on measurements of signal-to-noise ratio with respect to the distance between the subject and HR sensor/apparatus. The discussed methods are divided into the following two groups: the methods measuring electromagnetic energy generated by the bioelectrical activity within the cardiac muscle (referred to as direct methods), and the methods measuring displacement of a part of the subjects body caused by the periodic physical contractions of the heart (referred to as indirect methods). The first group is represented by a measuring device which detects changes in surrounding electric field, whereas the second group consists of measuring devices that use the Doppler effect phenomena (microwave radar, ultrasound radar) and audio signal acquired by a condenser microphone. All measuring devices were assembled and put to test. The results indicate that noncontact measuring of HR is possible, especially for distances of less than 50 cm meeting essential requirements for HR diagnostic purposes.
NeuroImage | 2014
Kiwoong Kim; Samo Begus; Hui Xia; S.-K. Lee; V. Jazbinsek; Zvonko Trontelj; Michael Romalis
Atomic magnetometers are emerging as an alternative to SQUID magnetometers for detection of biological magnetic fields. They have been used to measure both the magnetocardiography (MCG) and magnetoencephalography (MEG) signals. One of the virtues of the atomic magnetometers is their ability to operate as a multi-channel detector while using many common elements. Here we study two configurations of such a multi-channel atomic magnetometer optimized for MEG detection. We describe measurements of auditory evoked fields (AEF) from a human brain as well as localization of dipolar phantoms and auditory evoked fields. A clear N100m peak in AEF was observed with a signal-to-noise ratio of higher than 10 after averaging of 250 stimuli. Currently the intrinsic magnetic noise level is 4fTHz(-1/2) at 10Hz. We compare the performance of the two systems in regards to current source localization and discuss future development of atomic MEG systems.
Archive | 2013
Matjaz Mihelj; Domen Novak; Samo Begus
As virtual reality expands from the imaginary worlds of science fiction and pervades every corner of everyday life, it is becoming increasingly important for students and professionals alike to understand the diverse aspects of this technology. This book aims to provide a comprehensive guide to the theoretical and practical elements of virtual reality, from the mathematical and technological foundations of virtual worlds to the human factors and the applications that enrich our lives: in the fields of medicine, entertainment, education and others. After providing a brief introduction to the topic, the book describes the kinematic and dynamic mathematical models of virtual worlds. It explores the many ways a computer can track and interpret human movement, then progresses through the modalities that make up a virtual world: visual, acoustic and haptic. It explores the interaction between the actual and virtual environments, as well as design principles of the latter. The book closes with an examination of different applications, focusing on augmented reality as a special case. Though the content is primarily VR-related, it is also relevant for many other fields.
IEEE Transactions on Instrumentation and Measurement | 2014
Tadej Beravs; Samo Begus; Janez Podobnik; Marko Munih
The inertial/magnetic measurement units are an affordable instrument for the determination of orientation. The sensors embedded in the system are affected by nonidealities that can be greatly compensated by proper calibration, by determining sensor parameters, such as bias, misalignment, and sensitivity/gain. This paper presents an online calibration method for a three-axial magnetometer using a 3-D Helmholtz coil. The magnetometer is exposed to different directions of the magnetic field created by the 3-D coil. The parameters are estimated by using an unscented Kalman filter. The directions are calculated online by using a sensor parameter covariance matrix. The method evaluation is achieved by first running numerous simulations, followed by experiments using a real magnetometer, finally resulting in better accuracy of parameter estimation with a low number of measurement iterations compared with the method where magnetic field directions are determined manually.
Journal of Magnetic Resonance | 2014
Samo Begus; V. Jazbinsek; Janez Pirnat; Zvonko Trontelj
A low frequency (0.5-5 MHz) battery operated sensitive pulsed NQR spectrometer with a transmitter power up to 5 W and a total mass of about 3 kg aimed at detecting (14)N NQR signals, predominantly of illicit materials, was designed and assembled. This spectrometer uses a standard software defined radio (SDR) platform for the data acquisition unit. Signal processing is done with the LabView Virtual instrument on a personal computer. We successfully tested the spectrometer by measuring (14)N NQR signals from aminotetrazole monohydrate (ATMH), potassium nitrate (PN), paracetamol (PCM) and trinitrotoluene (TNT). Such a spectrometer is a feasible component of a portable single or multichannel (14)N NQR based detection device.
IEEE Transactions on Biomedical Engineering | 2015
Matej Reberšek; Igor Marjanovič; Samo Begus; Flavien Pillet; Marie-Pierre Rols; Damijan Miklavčič; Tadej Kotnik
Goal: We aimed to develop a system for controlled exposure of biological samples to conditions they experience when lightning strikes their habitats. Methods: We based the generator on a capacitor charged via a bridge rectifier and a dc-dc converter, and discharged via a relay, delivering arcs similar to natural lightning strokes in electric current waveform and similarly accompanied by acoustic shock waves. We coupled the generator to our exposure chamber described previously, measured electrical and acoustic properties of arc discharges delivered, and assessed their ability to inactivate bacterial spores. Results: Submicrosecond discharges descended vertically from the conical emitting electrode across the air gap, entering the sample centrally and dissipating radially toward the ring-shaped receiving electrode. In contrast, longer discharges tended to short-circuit the electrodes. Recording at 341 000 FPS with Vision Research Phantom v2010 camera revealed that initial arc descent was still vertical, but became accompanied by arcs leaning increasingly sideways; after 8-12 μs, as the first of these arcs formed direct contact with the receiving electrode, it evolved into a channel of plasmified air and short-circuited the electrodes. We eliminated this artefact by incorporating an insulating cylinder concentrically between the electrodes, precluding short-circuiting between them. While bacterial spores are highly resistant to electric pulses delivered through direct contact, we showed that with arc discharges accompanied by an acoustic shock wave, spore inactivation is readily obtained. Conclusion: The presented system allows scientific investigation of effects of arc discharges on biological samples. Significance: This system will allow realistic experimental studies of lightning-triggered horizontal gene transfer and assessment of its role in evolution.
Archive | 2014
Matjaž Mihelj; Domen Novak; Samo Begus
Interaction with a virtual environment is the most important feature of virtual reality, which requires the computer to respond to user’s actions. The mode of interaction with a computer is determined by the type of the user interface. The three most important aspects of interaction are manipulation of objects within the virtual environment, navigation through the virtual environment and communication with other entities existing in the virtual environment. All three aspects are the subject of this chapter.
Archive | 2014
Matjaž Mihelj; Domen Novak; Samo Begus
The chapter covers topics relevant for the design of haptic interfaces and their use in virtual reality applications. It provides knowledge required for understanding complex force feedback approaches and introduces general issues that must be considered for designing efficient and safe haptic interfaces. Human haptics, mathematical models of virtual environment, collision detection, force rendering and control of haptic devices are the main theoretical topics covered in this chapter, which concludes with a summary of different haptic display technologies.
Sensors | 2017
Jure Kranjec; Samo Begus; Gregor Geršak; Matjaž Šinkovec; Janko Drnovšek; Domen Hudoklin
The object of the proposed paper is to design and analyze the performance of a non-contact heart rate variability (HRV) measuring device based on ultrasound transducers. The rationale behind non-contact HRV measurement is the goal of obtaining a means of long term monitoring of a patient’s heart performance. Due to its complexity as a non-contact measuring device, influential physical quantities, error source and other perturbations were thoroughly investigated. For medical purposes it is of utmost importance to define the target uncertainty of a measuring method from the side of physicians, while it is the role of scientists to realistically evaluate all uncertainty contributions. Within this paper we present a novelty method of non-contact HRV measurement based on ultrasound transducers operating at two frequencies simultaneously. We report laboratory results and clinical evaluations are given for healthy subjects as well as patients with known heart conditions. Furthermore, laboratory tests were conducted on subjects during a relaxation period, and after 1 min physical activity