Samuel Jansson

Effective Parameterization of Laser Radar Observations of Atmospheric Fauna

The pace at which the worlds ecosystems and biodiversity of, e.g., pollinators decline is currently at a rate where it is challenging to document. In recent years, our group has made an effort to bridge the disciplines of laser remote sensing and biophotonics, and we have developed lidar methods for inventorying the biosphere. Here, we present an effective method for extracting fauna observations from atmospheric lidar data and reducing the observations to a set of descriptive parameters. Kilohertz-lidar data are used, the essential steps are walked through and a glimpse of the obtainable data product is presented.

Multiband modulation spectroscopy for the determination of sex and species of mosquitoes in flight

We present a dual-wavelength polarimetric measurement method to distinguish species and sexes of disease transmitting mosquitoes in flight. By measuring co- and de-polarized backscattered light at 808 and 1550 nm, the degree of linear polarization, wingbeat frequency, reflectance, spectral ratio and glossiness of mosquitoes can be retrieved. Body and wing contributions to these signals can be separated. Whereas the optical cross section is sensitive to the aspect of observation, thus the heading direction of the insect in flight, we demonstrate that polarimetric- and spectral-band ratios are largely invariant to the aspect of observation. We show that wing glossiness, as well as wing- and body-spectral ratios are particularly efficient in distinguishing Anopheles coluzzii and Anopheles arabiensis, 2 closely related species of malaria vectors. Spectral and polarimetric ratios relate to microstructural and melanization features of the wing and body of these species. We conclude that multiband modulation spectroscopy is a useful expansion of the parameter space that can be used to improve the specificity of entomological lidars.

The Scheimpflug lidar method

The recent several years we developed the Scheimpflug lidar method. We combined an invention from the 19th century with modern optoelectronics such as diode lasers and CMOS array from the 21st century. The approach exceeds expectations of background suppression, sensitivity and resolution beyond known from time-of-flight lidars. We accomplished multiband elastic atmospheric lidars for resolving single particles and aerosol plumes from 405 nm to 1550 nm. We pursued hyperspectral differential absorption lidar for molecular species. We demonstrated a simple method of inelastic hyperspectral lidar for profiling aquatic environments and vegetation structure. Not least, we have developed polarimetric Scheimpflug lidar with multi-kHz sampling rates for remote modulation spectroscopy and classification of aerofauna. All these advances are thanks to the Scheimpflug principle. Here we give a review of how far we have come and shed light on the limitations and opportunities for future directions. In particular, we show how the biosphere can be resolved with unsurpassed resolution in space and time, and share our expectation on how this can revolutionize ecological analysis and management in relation to agricultural pests, disease vectors and pollinator problematics.

Exploitation of an atmospheric lidar network node in single-shot mode for the classification of aerofauna

Abstract. The migration of aerofauna is a seasonal phenomenon of global scale, engaging billions of individuals in long-distance movements every year. Multiband lidar systems are commonly employed for the monitoring of aerosols and atmospheric gases, and a number of systems are operated regularly across Europe in the framework of the European Aerosol Lidar Network (EARLINET). This work examines the feasibility of utilizing EARLINET for the monitoring and classification of migratory fauna based on their pigmentation. An EARLINET Raman lidar system in Athens transmits laser pulses in three bands. By installing a four-channel digital oscilloscope on the system, the backscattered light from single-laser shots is measured. Roughly 100 h of data were gathered in the summer of 2013. The data were examined for aerofauna observations, and a total of 1735 observations interpreted as airborne organisms intercepting the laser beam were found during the study period in July to August 2013. The properties of the observations were analyzed spectrally and intercompared. A spectral multimodality that could be related to different observed species is shown. The system used in this pilot study is located in Athens, Greece. It is concluded that monitoring aerial migration using it and other similar systems is feasible with minor modifications, and that in-flight species classification could be possible.

The bat–bird–bug battle: daily flight activity of insects and their predators over a rice field revealed by high-resolution Scheimpflug Lidar

We present the results of, to our knowledge, the first Lidar study applied to continuous and simultaneous monitoring of aerial insects, bats and birds. It illustrates how common patterns of flight activity, e.g. insect swarming around twilight, depend on predation risk and other constraints acting on the faunal components. Flight activity was monitored over a rice field in China during one week in July 2016, using a high-resolution Scheimpflug Lidar system. The monitored Lidar transect was about 520 m long and covered approximately 2.5 m3. The observed biomass spectrum was bimodal, and targets were separated into insects and vertebrates in a categorization supported by visual observations. Peak flight activity occurred at dusk and dawn, with a 37 min time difference between the bat and insect peaks. Hence, bats started to feed in declining insect activity after dusk and stopped before the rise in activity before dawn. A similar time difference between insects and birds may have occurred, but it was not obvious, perhaps because birds were relatively scarce. Our observations are consistent with the hypothesis that flight activity of bats is constrained by predation in bright light, and that crepuscular insects exploit this constraint by swarming near to sunset/sunrise to minimize predation from bats.

Can the narrow red bands of dragonflies be used to perceive wing interference patterns

Abstract Despite numerous studies of selection on position and number of spectral vision bands, explanations to the function of narrow spectral bands are lacking. We investigate dragonflies (Odonata), which have the narrowest spectral bands reported, in order to investigate what features these narrow spectral bands may be used to perceive. We address whether it is likely that narrow red bands can be used to identify conspecifics by the optical signature from wing interference patterns (WIPs). We investigate the optical signatures of Odonata wings using hyperspectral imaging, laser profiling, ellipsometry, polarimetric modulation spectroscopy, and laser radar experiments. Based on results, we estimate the prospects for Odonata perception of WIPs to identify conspecifics in the spectral, spatial, intensity, polarization, angular, and temporal domains. We find six lines of evidence consistent with an ability to perceive WIPs. First, the wing membrane thickness of the studied Odonata is 2.3 μm, coinciding with the maximal thickness perceivable by the reported bandwidth. Second, flat wings imply that WIPs persist from whole wings, which can be seen at a distance. Third, WIPs constitute a major brightness in the visual environment only second after the solar disk. Fourth, WIPs exhibit high degree of polarization and polarization vision coincides with frontal narrow red bands in Odonata. Fifth, the angular light incidence on the Odonata composite eye provides all prerequisites for direct assessment of the refractive index which is associated with age. Sixth, WIPs from conspecifics in flight make a significant contribution even to the fundamental wingbeat frequency within the flicker fusion bandwidth of Odonata vision. We conclude that it is likely that WIPs can be perceived by the narrow red bands found in some Odonata species and propose future behavioral and electrophysiological tests of this hypothesis.

Passive kHz lidar for the quantification of insect activity and dispersal

BackgroundIn recent years, our group has developed electro-optical remote sensing methods for the monitoring and classification of aerofauna. These methods include active lidar methods and passive, so-called dark-field methods that measure scattered sunlight. In comparison with satellite- and airborne remote sensing, our methods offer a spatiotemporal resolution several orders of magnitude higher, and unlike radar, they can be employed close to ground. Whereas passive methods are desirable due to lower power consumption and ease of use, they have until now lacked ranging capabilities.ResultsIn this work, we demonstrate how passive ranging of sparse insects transiting the probe volume can be achieved with quadrant sensors. Insects are simulated in a raytracing model of the probe volume, and a ranging equation is devised based on the simulations. The ranging equation is implemented and validated with field data, and system parameters that vary with range are investigated. A model for estimating insect flight headings with modulation spectroscopy is implemented and tested with inconclusive results. Insect fluxes are retrieved through time-lag correlation of quadrant detector segments, showing that insects flew more with than against the wind during the study period.ConclusionsThe presented method demonstrates how ranging can be achieved with quadrant sensors, and how it can be implemented with or without active illumination. A number of insect flight parameters can be extracted from the data produced by the sensor and correlated with complementary information about weather and topography. The approach has the potential to become a widespread and simple tool for monitoring abundances and fluxes of pests and disease vectors in the atmosphere.