Sang-Ik Han

Genetic variation through Dissociation (Ds) insertional mutagenesis system for rice in Korea: progress and current status

A gene detection strategy using two-component Ac/Ds construct, with the mobile Ds transposon, has been developed to better understand gene functions in crops. Currently, 115,000 Ds insertion lines have been generated through the Ac/Ds gene trap system in Korea using japonica rice Dongjin as donor. Four hundred and thirty-seven mutants from 12,162 Ds-tagged lines were catalogued, including physiological and agronomic traits. Different traits were identified with distinct characteristics in terms of tillers, panicles, leaves, flowers, seed, chlorophyll content, and height. Culm and panicle length, number of panicles, and days to flowering of the Dongjin Ds population revealed high standard deviations compared with the donor cultivar. An evaluation of the Ds distribution on the chromosome revealed that 74.5% of the Ds were reinserted into gene-rich regions, making this Ac/Ds-mediated gene trap system useful in helping to gain an understanding of the function of genes and thus improve the gene-tagging system in rice.

Comparative analysis of physicochemicals and antioxidative properties of new giant embryo mutant, YR23517Acp79, in rice (Oryza sativa L.)

Nutritional and physicochemical properties of new giant embryo mutant rice (YR23517Acp79, YR) were analyzed. YR exhibited increased total protein (9.3±0.3%), lipid (3.7±1.1%), amino acid (663.28±1.9 mg/g), and mineral contents (Ca=284.0±6.2, Mg=1417.5±13.6 mg/kg). In YR brown rice four major physicochemicals, including gamma-aminobutyric acid (brown rice= 0.46±0.014 mg/g), γ-oryzanol (0.43±0.021 mg/g), vitamin B1 (6.42±0.3 mg/kg), and tocopherols (alpha= 2.68±0.1, beta=0.11±0.01, gamma=0.05±0.001 mg/100 g) increased in comparison to reported giant embryo (Keunnunbyeo, KB) and normal embryo rice (Ilmibyeo, IB). YR showed higher scavenging activities against 1,1-diphenyl-2-picrylhydrazyl (0.2 g/mL=57.1±2.25) and 2,2′-Azinobis(3-ethylbenzothiazoline-6-sulfonic acid) (0.2 g/mL=50.2±1.45) radicals but also inhibited lipopolysaccharide-induced nitric oxide production without cytotoxicity. These results indicate YR is a high quality functional rice due to its high nutrition content and antioxidant effects of physicochemicals.

Changes in anthocyanin and isoflavone concentrations in black seed-coated soybean at different planting locations.

This study assessed the altitudinal variations in the anthocyanin and isoflavone contents of six black seed coated soybean [Glycine max (L.) Merrill] cultivars. The black soybean cultivars Heugcheong, Seonheuk, Geomjeong 1, Geomjeong 2, Cheongja 2, and Cheongja 3 were planted at Milyang (12 m above mean sea level — low altitude) and Muju (600 m — high altitude), Korea on 10 June 2005 and 2006. The total anthocyanin and isoflavone contents and individual components were investigated by reverse-phase high performance liquid chromatography (HPLC). All black soybean cultivars cultivated in high altitude possessed significantly higher total anthocyanin (p < 0.01) and isoflavone (p < 0.01) contents than those grown in low altitude. For anthocyanin composition, cyanidin-3-O-glucoside, cyanidin-3-O-galactoside, and peonidin-3-O-glucoside contents were significantly higher while delphinidin-3-O-glucoside contents was significantly lower at high altitude. The composition of individual isoflavones, 6″-O-malonyldaidzin, and 6″-O-malonylgenistin contents significantly increased at high altitude.

Relationship of radical scavenging activities and anthocyanin contents in the 12 colored rice varieties in Korea

Total polyphenolic, protein, lipid, and anthocyanin contents in grains of 12 Korean colored rice varieties were evaluated for their 2,2-di(4-tert-octylphenyl)-1-picrylhydrazyl) (DPPH) and 2,2- Azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium (ABTS) radical- scavenging activities. Three anthocyanins, cyanidin-3-O-glucoside (Cy-3-G), petunidin-3-O-glucoside (Pt-3-G), and peonidin-3-O-glucoside (Pn-3-G), were also characterized by ultra performance liquid chromatography. Among the rice varieties, ‘Heugjinju’, ‘Heugseol’, and ‘Sintoheugmi’ contained high total phenolic contents compared to other varieties. Anthocyanin content was highest in ‘Heugjinju’; no anthocyanins were detected in ‘Hongjinju’ and ‘Jeogjinju’. Highest antioxidant activity was observed in ‘Heugjinju’ and ‘Jeogjinju’ exhibited the lowest activity. To determine the correlation of total polyphenolic and anthocyanin contents to antioxidant activity, linear regression analysis was carried out. The results showed total polyphenolic content was strongly correlated with antioxidant activity, suggesting total phenolic content as key factor in antioxidant activity of colored rice. ‘Heugjinju’, ‘Heugseol’, and ‘Sintoheugmi’ could have important nutritional value.

Large-scale screening of rice accessions to evaluate resistance to bakanae disease

Bakanae disease is an important fungal disease in the world. No rice (Oryza sativa L.) varieties have been found to be completely resistant to this disease. To facilitate accurate, uniform and simultaneous screening of many rice accessions, we developed an inoculation method for microconidia of Fusarium fujikuroi using a tissue embedding cassette and seedling tray. Standards for evaluating the inoculated rice seedlings as healthy or unhealthy were also established. The method was fast and reproducible for accurately evaluating resistance to bakanae disease in rice.

Fat-Soluble Bioactive Components in Colored Rice Varieties

Bioactive components in rice vary depending on the variety and growing condition. Fat-soluble components such as γ-oryzanol, tocopherols, tocotrienols, carotenoids, and fatty acids were analyzed in brown, sugary brown, red, and black rice varieties using established high-performance liquid chromatography (HPLC) and GC methodologies. In addition, these colored rice varieties were further analyzed using a high-resolution liquid chromatography-mass spectrometry/mass spectrometry (LC-MS/MS) (LTQ-Orbitrap XL) to identify the [M-H](-) ions of γ-oryzanol, ranging from m/z 573.3949 to 617.4211. The highest content of tocopherols (α-, 1.5; γ-, 0.5 mg/100 g) and carotenoids (lutein 244; trans-β carotene 25 μg/100 g) were observed in black rice; tocotrienols (α-, 0.07; γ-, 0.14 mg/100 g) in red rice, and γ-oryzanol (115 mg/100 g) in sugary brown rice. In all colored rice varieties, the major fatty acids were palmitic (16:0), oleic (18:1n-9), and linoleic (18:2n-6) acids. When the γ-oryzanol components were further analyzed by LC-MS/MS, 3, 10, 8, and 8 triterpene alcohols or sterol ferulates were identified in brown, sugary brown, red, and black rice varieties, respectively. Such structural identification can lead to the elucidation of biological function of each component at the molecular level. Consumption of colored rice rich in beneficial bioactive compounds may be a useful dietary strategy for achieving optimal health.

A Waxy Black Giant Embryo Earley Maturing Rice Variety ‘Nunkeunheugchal’

Nunkeunheugchal (registration No. 01-0001-2014-4), a black waxy giant embryo rice cultivar, was developed by the rice breeding team of National Institute of Crop Science (NICS), RDA in 2012. This cultivar was derived from the cross between ge and Josaengheugchal in 2004/2005 winter season, and selected by a promising line, YR25277-B-B-314-2, was selected and designated as the line of Milyang263 in 2009. The local adaptability test of Milyang263 was carried out at four locations from 2010 to 2012 and it was named as Nunkeunheugchal. This variety is a early maturity cultivar. It has 65 cm in culm length and 72 spikelets per panicle, and 1,000 grain-weight of brown rice is 17.8 g which is less than that of Josaengheugchal. This variety is resistant to leaf blast, but susceptible to bacterial blight, neck blast, virus disease and insect pest. The yield potential of Nunkeunheugchal was about 3.54 MT/ha as brown rice at ordinary fertilizer level in local adaptability test for three years. Nunkeunheugchal possesses benefits to rice consumers because of high amounts of GABA, anthocyanin, calcium and iron. This variety would be adaptable to the paddy field of middle and southern plain region of Korea.

Bioactives in Commonly Consumed Cereal Grains: Implications for Oxidative Stress and Inflammation.

Oxidative stress and inflammation are closely linked to various chronic diseases. Thus, targeting this axis of oxidative stress and inflammation is a particularly interesting area of study for reducing the risk of chronic diseases, including, but not limited to, metabolic disorders, cancer, cardiovascular disease, and Alzheimers disease. It is well known that antioxidants play a pivotal role in tuning this axis. In this review, we introduce five different cereal grains, which are the most commonly consumed throughout the world and are functionally reported to have antioxidant activity: oat (Avena spp.), barley (Hordeum spp.), rice (Oryza spp.), wheat (Triticum spp.), and rye (Secale spp.). Bioactive components of these grains, partial grains or whole grains, have demonstrated antioxidant and anti-inflammatory activities in cells and animals. Although further study is required to establish their efficacy for treating patients with chronic diseases, we suggest that grains, which are a great source of antioxidants, have potential in the prevention of oxidative stress and inflammation-related chronic diseases.

Comparative analysis of physicochemicals and antioxidative properties in new red rice (Oryza sativa L. cv. Gunganghongmi)

The main objectives of this study were to investigate physicochemicals and antioxidant activities of new red rice (Oryza sativa cv. Gunganghongmi (GH)) by comparing normal brown (Nampyeongbyeo, NB) and reported red rice (Jukjinjubyeo, JB) in Korea. The nutritional constituents, including protein, oil, sugar, fatty acid, GABA, and γ-oryzanol were not significantly different between normal brown and colored rice. However, the ethanol extract of GH showed the highest phenolic content (24.7 ± 1.3 mg g−1). The ethanol extracts of GH showed higher scavenging activities against DPPH (0.2 mg mL−1 = 62.1 ± 2.5%) and ABTS (0.2 mg mL−1 = 63.2 ± 3.5%) radicals. Moreover, GH more inhibited LPS-induced nitric oxide (NO) production (13.2 ± 1.4 μM) than JB (18.3 ± 2.3 μM) and NB (22.1 ± 1.4 μM) at the same concentration (0.2 mg mL−1) without cytotoxicity. These results suggest that new red rice (GH) would be considered to be new functional rice due to its anti-oxidative effect and high nutrition.

Comparative studies on major nutritional components of black waxy rice with giant embryos and its rice bran

The concentration of nutrients in brown rice is mainly associated with embryo size. Various beneficial components have been purified from rice bran. Recently developed black waxy rice with a giant embryo (‘Milyang 263’, BGE), which is the get mutant of the GE gene, was selected and analyzed to produce high quality nutritional components. γ-Aminobutyric acid (GABA) content in BGE rice bran, one of the most important nutritional compounds in rice, showed a 10.6-fold increase (2.66±0.48 mg/g) compared to that of BGE brown rice (0.25±0.01 mg/g). In addition, brown rice and BGE rice bran showed enriched amylopectin (94.5±0.5 and 97.0±0.0%) and bioactive anthocyanin [Cy-3-G: 75.15±4.18 (brown rice), 82.97±0.81 (rice bran) and Pn-3-G: 1.52±0.50 (brown rice), 4.33±0.20 (rice bran); mg/100 g] contents. These results suggest that BGE rice bran can be used as an excellent raw material to efficiently produce high quality essential amino acids, cyanidin-3 glycoside-enriched anthocyanins, and GABA.