Sanjuana Hernández-Delgado

Genetic differentiation among Maconellicoccus hirsutus (Hemiptera: Pseudococcidae) populations living on different host plants.

ABSTRACT The pink hibiscus mealybug Maconellicoccus hirsutus (Green) is a dangerous pest that damages a wide variety of agricultural, horticultural, and forestry crops. Amplified fragment length polymorphism (AFLP) fingerprints were used to characterize the genetic variation of 11 M. hirsutus populations infesting three plant species in Nayarit, Mexico. Analysis was carried out using four primers combinations, producing 590 polymorphic bands. Cluster analysis, as well as bootstrap dendrogram and nonmetric multidimensional scaling analysis, grouped M. hirsutus populations according to their host plant. The estimated FST values indicated a high differentiation in M. hirsutus populations among the three host plant species. These results were also supported by a Bayesian analysis, which indicated a population clustering robustness according to their host plant. Genetic variation among populations is not caused by geographic distances, as shown by a Mantel test.

Analysis of mitochondrial genetic diversity of Ustilago maydis in Mexico

Abstract The current understanding of the genetic diversity of the phytopathogenic fungus Ustilago maydis is limited. To determine the genetic diversity and structure of U. maydis, 48 fungal isolates were analyzed using mitochondrial simple sequence repeats (SSRs). Tumours (corn smut or ‘huitlacoche’) were collected from different Mexican states with diverse environmental conditions. Using bioinformatic tools, five microsatellites were identified within intergenic regions of the U. maydis mitochondrial genome. SSRMUM4 was the most polymorphic marker. The most common repeats were hexanucleotides. A total of 12 allelic variants were identified, with a mean of 2.4 alleles per locus. An estimate of the genetic diversity using analysis of molecular variance (AMOVA) revealed that the highest variance component is within states (84%), with moderate genetic differentiation between states (16%) (FST = 0.158). A dendrogram generated using the unweighted paired-grouping method with arithmetic averages (UPGMA) and the Bayesian analysis of population structure grouped the U. maydis isolates into two subgroups (K = 2) based on their shared SSRs.

Bases bioquímicas de la tolerancia al estrés osmótico en hongos fitopatógenos: el caso de Macrophomina phaseolina (Tassi) Goid.

Fungus Macrophomina phaseolina (Tassi) Goid. is the causative agent of charcoal rot disease which causes significant yield losses in major crops such as maize, sorghum, soybean and common beans in Mexico. This fungus is a facultative parasite which shows broad ability to adapt itself to stressed environments where water deficits and/or high temperature stresses commonly occur. These environmental conditions are common for most cultivable lands throughout Mexico. Here we describe some basic facts related to the etiology and epidemiology of the fungus as well as to the importance of responses to stressed environments, particularly to water deficits, based on morphology and growth traits, as well as on physiology, biochemistry and pathogenicity of fungus M. phaseolina. To conclude, we show some perspectives related to future research into the genus, which emphasize the increasing need to improve the knowledge based on the application of both traditional and biotechnological tools in order to elucidate the mechanisms of resistance to environmental stress which can be extrapolated to other useful organisms to man.

Diversity of Common Bean (Phaseolus vulgaris L.) Landraces and the Nutritional Value of their Grains

Grain legumes are considered major sources of dietary proteins, calories, certain minerals and vitamins, and they are the most widely cultivated and consumed crops worldwide. Among them are the common beans, whose major production volumes came from landraces cultivated in traditional farming systems. The objective of this study was to evaluate the phenotypic diversity of a set of common bean landraces from Mexico based on the agromorphological traits and nutritional composition of the grain in the context of traditional farming systems. Different field and laboratory data were collected and complemented with secondary information published in refereed journals and research reports. The results showed that there are significant differences in the morphological and physiological traits of the plant, pod and grain among groups of common bean landraces of different geographic origins, which were associated with different indigenous groups. Similar patterns were observed in the contents of anthocyanins, polyphenols, flavoinds and minerals as well as antioxidant activity. In the evaluated population groups in each region, there are outstanding populations in terms of agromorphological traits and the nutritional value of the grain that can enable a participatory breeding initiative guided by regional objectives. Some populations from Sierra Norte, Oaxaca, presented higher values in Zn and Fe, and populations from Estado de Mexico exhibited high polyphenol and flavonoid values but stable agronomic behaviour.

Using Amplified Fragment Length Polymorphisms (AFLP) to Study Genetic Variability in Several Freshwater Rotifer Species

We have used amplified fragment length polymorphisms (AFLP) to investigate the potential of this technique as a tool to measure genetic variability in eight species of freshwater rotifers: Brachionus calyciflorus, Lecane bulla, L. luna, L. quadridentata, Plationus patulus, Philodina acuticornis odiosa, Rotaria neptunia, and R. rotatoria. We used nine combinations of oligonucleotides. We observed a total of 806 amplified bands, 798 polymorphic and 8 monomorphic. The data were analyzed using cluster analysis with UPGMA, first within each set of oligonucleotide combination and finally using all nine combinations. Our best dendrogram clearly separated monogononts from digononts, and grouped the species of monogononts in the two genera. However, it grouped R. neptunia with P. acuticornis odiosa rather than with R. rotatoria. These results are discussed in view of recent works in the literature measuring genetic variability and discussing the phylogeny of the Rotifera.

ETIQUETAS DE SECUENCIAS EXPRESADAS DIFERENCIALES DE FRUTOS DE AGUACATE RAZA MEXICANA (Persea americana Mill. var. drymifolia)

In this study, Differential Expressed Sequence Tags (ESTs) of immature fruits of Persea americana Mill var. drymifolia of the state of Nuevo León, Mexico were developed and identified. Ten genotypes with fruits of different size and shape were selected to generate ESTs by the differential display technique. In total, 393 amplified differential fragments were obtained, 82 fragments were sequenced and edited for identification and comparison with NCBI nucleotide and protein databases. Forty sequences showed significant similarity to mRNA sequences and / or sequences of hypothetical or predicted proteins belonging to P. americana and / or other genera. Some sequences were related to enzymes such as flavanone-3-hydroxylase (F3H), lecithin-cholesterol acyltransferase, glutathione-S-transferase microsomal and pleiotropic drug resistance protein. With the information of the nucleotide composition of ESTs, primers could be designed to quantify expression levels by real-time RT-PCR of genes in different phenological stages of the fruit and to make comparisons among genotypes that allow determining alternative uses of their fruits.

CARACTERIZACIÓN MORFOLÓGICA DE GERMOPLASMA DE GUAYABOS DE MÉXICO: IMPLICACIONES EN SU CONSERVACIÓN Y MEJORAMIENTO GENÉTICO

Guavas (Psidium guajava L.) growing throughout Mexico show broad morphologic and productive variation due the crop is commonly sexual-propagated. The characterization of genetic diversity of Mexican guava germplasm will allow identify potential parents for genetic improvement as well as the production of new clonal cultivars. In this work 88 guava accessions [87 belong to P. guajava and one from P. friedrichsthalianum (Berg.) Niedz] growing in Huanusco, Zacatecas Mexico were characterized on the basis of 50 morphologic descriptors. The 95% of germplasm shows ovoid or round fruit shape; 92% fruits with beige or white mesocarp and 87.5% has yellow fruits. Fruits with these traits are locally named as ‘China’ or ‘Media China’ and they are preferred for fresh use. Seven quantitative traits were those that better described the morphologic variability of germplasm: two from trees (stem thickness and leaf length) and five from fruits (polar and equatorial diameter; sepal size; calyx cavity diameter; and total solid soluble content). Three accessions (numbers 68, 52, and 49) outstand due their high values of tree growth under field conditions although showing small fruit sizes while other five accessions (numbers 79, 57, 60, 78, and 56) exhibited small tree sizes but high values for fruit, sepals and calyx cavity, and total solid soluble contents.

Climatic adaptation and ecological descriptors of wild beans from Mexico

Abstract Despite its economic, social, biological, and cultural importance, wild forms of the genus Phaseolus are not well represented in germplasm banks, and they are at great risk due to changes in land use as well as climate change. To improve our understanding of the potential geographical distribution of wild beans (Phaseolus spp.) from Mexico and support in situ and ex situ conservation programs, we determined the climatic adaptation ranges of 29 species and two subspecies of Phaseolus collected throughout Mexico. Based on five biotic and 117 abiotic variables obtained from different databases—WorldClim, Global‐Aridity, and Global‐PET—we performed principal component and cluster analyses. Germplasm was distributed among 12 climatic types from a possible 28. The general climatic ranges were as follows: 8–3,083 m above sea level; 12.07–26.96°C annual mean temperature; 10.33–202.68 mm annual precipitation; 9.33–16.56 W/m2 of net radiation; 11.68–14.23 hr photoperiod; 0.06–1.57 aridity index; and 10–1,728 mm/month of annual potential evapotranspiration. Most descriptive variables (25) clustered species into two groups: One included germplasm from semihot climates, and the other included germplasm from temperate climates. Species clustering showed 45% to 54% coincidence with species previously grouped using molecular data. The species P. filiformis, P. purpusii, and P. maculatus were found at low‐humidity locations; these species could be used to improve our understanding of the extreme aridity adaptation mechanisms used by wild beans to avoid or tolerate climate change as well as to introgress favorable alleles into new cultivars adapted to hot, dry environments.

Flavonoid and Capsaicinoid Contents and Consumption of Mexican Chili Pepper (Capsicum annuum L.) Landraces

There is insufficient evidence to identify the precise health effects of chili pepper consumption. However, there is evidence of their topical use as an analgesic to decrease pain from rheumatoid arthritis, osteoarthritis, neuralgias, neuropathic diabetes, neuronal dysfunctions and inflammation, among others. In this work, the diversity and variety of consumed forms of chilis in Mexico, flavonoid and capsaicinoid content in fruits, and their potential health uses are documented, based on various research results and bibliographic information. In Mexico, more than 150 landraces of wild and cultivated origins are consumed and preserved and are distributed throughout the country; the greatest diversity is concentrated in the central and south-southeastern regions. Consumption per capita in urban households is from 8 to 9 kg, and in rural communities, it varies from 14 to 17 kg. Chili peppers contain up to 23 flavonoids and 20 capsaicinoids, differing among landraces because of crop management, maturation of fruits, postharvest management and ecological-environmental influences. Flavonoids and capsaicinoids confer antioxidant, anticarcinogenic properties on the fruit and have lipolytic and preventative effects on chronic degenerative diseases. However, in vitro and in vivo experimental trials of capsaicinoids and flavonoids with beneficial effects must be conducted with regard to human health.

MORPHOLOGICAL AND GENETIC ANALYSIS OF Triplaris guayaquilensis Wedd (POLYGONACEAE): ONE NATIVE TREE OF ECUADOR

In this paper, we assessed six native populations (55 trees) of Triplaris guayaquilensis Wedd (Fernan Sanchez), one of the major forest species from Ecuador, using morphological and AFLP (Amplified Fragment Length Polymorphisms) data. The populations were collected through two macro-sites (Central coastals: Quevedo, Ventanas, la Guayas; Andean surroundings: la Mana, Patricia Pilar, Pichincha). The populations showed the following traits: straight shaft (66 %); round, irregular top shape (50 %); and branch insertion angle 0° - 30° (86 %). Four qualitative (straight shape, type of leaf edge, leaf width and leaf pubescence) and four quantitative (commercial tree height, basal area, commercial volume and total volume) traits were the most explicative traits present after Principal Component Analysis (PCA). PCA separated populations into two groups: one group included populations from Central Coastals which showed morphological traits highly and positively correlated with wood production, and the other group included populations with lower tree growth from the Andean surroundings. Populations from Central Coastals showed the highest values of genetic diversity indexes, AFLP markers separated populations based on the macro site of origin. For K= 2 Bayesian analysis separated FS populations into two groups; two populations from Central Coastals region and the other four the Andean surroundings region (3) and 1 from Central Coastals (La Guayas). For greater K values, the genetic fragmentation of populations by origins was evident since for K = 5 four groups were performed: one including populations from Quevedo and Ventanas and other from La Guayas (Coastals), the third group included trees from La Mana and Pichincha and the fourth, from Patricia Pilar (Andean surroundings). Results suggested the constant and effective genetic recombination or the genetic flow among and within Fernan Sanchez populations with a clear tendency towards genetic differentiation.