Santiago García-Granda

Interactions of metal ions with two quinolone antimicrobial agents (cinoxacin and ciprofloxacin): Spectroscopic and X-ray structural characterization. Antibacterial studies

Several novel metal-quinolone compounds have been synthesized and characterized by analytical, spectroscopic and X-ray diffraction methods. The crystal structure of the four compounds, Na(2)[(Cd(Cx)3)(Cd(Cx)3(H2O))].12H2O, [Co(Cp)2(H2O)2].9H2O, [Zn(Cp)2(H2O)2].8H2O and [Cd(HCp)2(Cl)2].4H2O, is presented and discussed: HCx=1-ethyl-1,4-dihydro-4-oxo(1,3)-dioxolo(4,5-g)cinnoline-3-carboxylic acid and HCp=1-cyclopropyl-6-fluoro-1,4-dihydro-4-oxo-7-(1-piperazinyl)-3-quinoline carboxylic acid. In all these compounds the quinolone acts as a bidentate chelate ligand that binds through one carboxylate oxygen atom and the exocyclic carbonyl oxygen atom. Complexes of ciprofloxacin were screened for their activity against several bacteria, showing activity similar to that of the ligand. In addition, the number of bacteria killed after 3 h of incubation with the ligand, [Co(Cp)2(H2O)2].9H2O, Ni(Cp)2.10H2O and Cu(Cp)2.6H2O, was determined against S. aureus ATCC25923. There is a direct relationship between the growth rate and the lethal rate. Against growing bacteria, the ligand is the most bactericidal and Cu(Cp)2.6H2O is the less bactericidal. On the contrary, against non-dividing bacteria, the complexes were more bactericidal than the ligand, with Cu(Cp)(2).6H(2)O the most bactericidal compound.

Cinoxacin complexes with divalent metal ions. Spectroscopic characterization. Crystal structure of a new dinuclear Cd(II) complex having two chelate-bridging carboxylate groups. Antibacterial studies

Several cinoxacin (HCx) complexes with divalent metal ions have been prepared and characterized by spectroscopic techniques. The crystal structure of [Cd2(Cx)4(H2O)2].10H2O has been determined by X-ray diffraction. The complex is triclinic, space group P1 with unit-cell dimensions: a = 10.412(2), b = 11.119(2), c = 13.143(6)A, chi== 76.78(4) degrees, beta = 74.59(3) degrees, gamma = 77.12(3) degrees, V = 1406.0(8) A3. In this complex each cadmium atom is heptacoordinated: the metal environment is formed by two Oketo and two Ocarbox atoms from two different cinoxacinate monoanions, two carboxylate oxygen atoms from a third cinoxacinate ligand and by one water oxygen atom on the seventh position. Two of the cinoxacinate ions act as tridentate chelate and bridging ligands and the other one as a bidentate chelate ligand. In the bridging monoanions the carboxylate group is behaving as a chelate ligand. All the complexes were screened for their activity against several bacteria, showing activity similar to that of cinoxacin. Additionally, the number of bacteria killed after 3 h of incubation with cinoxacin, [Cu(Cx)2].2H2O and [Co(Cx)3]Na.10H2O complexes was determined against E. coli ATCC 25922; the copper compound presents paradoxical effect which has been described and related to the mechanism of action of quinolones.

Antisymmetric Exchange in Triangular Tricopper(II) Complexes: Correlation among Structural, Magnetic, and Electron Paramagnetic Resonance Parameters

Two new trinuclear copper(II) complexes, [Cu(3)(μ(3)-OH)(daat)(Hdat)(2)(ClO(4))(2)(H(2)O)(3)](ClO(4))(2)·2H(2)O (1) and [Cu(3)(μ(3)-OH)(aaat)(3)(H(2)O)(3)](ClO(4))(2)·3H(2)O (2) (daat = 3,5-diacetylamino-1,2,4-triazolate, Hdat = 3,5-diamino-1,2,4-triazole, and aaat = 3-acetylamino-5-amino-1,2,4-triazolate), have been prepared from 1,2,4-triazole derivatives and structurally characterized by X-ray crystallography. The structures of 1 and 2 consist of cationic trinuclear copper(II) complexes with a Cu(3)OH core held by three N,N-triazole bridges between each pair of copper(II) atoms. The copper atoms are five-coordinate with distorted square-pyramidal geometries. The magnetic properties of 1 and 2 and those of five other related 1,2,4-triazolato tricopper(II) complexes with the same triangular structure (3-7) (whose crystal structures were already reported) have been investigated in the temperature range of 1.9-300 K. The formulas of 3-7 are [Cu(3)(μ(3)-OH)(aaat)(3)(H(2)O)(3)](NO(3))(2)·H(2)O (3), {[Cu(3)(μ(3)-OH)(aat)(3)(μ(3)-SO(4))]·6H(2)O}(n) (4), and [Cu(3)(μ(3)-OH)(aat)(3)A(H(2)O)(2)]A·xH(2)O [A = NO(3)(-) (5), CF(3)SO(3)(-) (6), or ClO(4)(-) (7); x = 0 or 2] (aat =3-acetylamino-1,2,4-triazolate). The magnetic and electron paramagnetic resonance (EPR) data have been analyzed by using the following isotropic and antisymmetric exchange Hamiltonian: H = -J[S(1)S(2) + S(2)S(3)] - j[S(1)S(3)] + G[S(1) × S(2) + S(2) × S(3) + S(1) × S(3)]. 1-7 exhibit strong antiferromagnetic coupling (values for both -J and -j in the range of 210-142 cm(-1)) and antisymmetric exchange (G varying from to 27 to 36 cm(-1)). At low temperatures, their EPR spectra display high-field (g < 2.0) signals indicating that the triangles present symmetry lower than equilateral and that the antisymmetric exchange is operative. A magneto-structural study showing a lineal correlation between the Cu-O-Cu angle of the Cu(3)OH core and the isotropic exchange parameters (J and j) has been conducted. Moreover, a model based on Moriyas theory that allows the prediction of the occurrence of antisymmetric exchange in the tricopper(II) triangles, via analysis of the overlap between the ground and excited states of the local Cu(II) ions, has been proposed. In addition, analytical expressions for evaluating both the isotropic and antisymmetric exchange parameters from the experimental magnetic susceptibility data of triangular complexes with local spins (S) of (1)/(2), (3)/(2), or (5)/(2) have been purposely derived. Finally, the magnetic and EPR results of this work are discussed and compared with those of other tricopper(II) triangles reported in the literature.

COORDINATION BEHAVIOR OF SULFATHIAZOLE. CRYSTAL STRUCTURE OF CU(SULFATHIAZOLE) (PY)3CL SUPEROXIDE DISMUTASE ACTIVITY

Abstract The preparation, spectroscopic, magnetic properties, and crystal structure of [Cu(stzxpy) 3 Cl] (stz − stands for the deprotonated form of sulfathiazole, 4-amino-N-2-thiazolylbencenosulfonamide) are reported. Crystals are orthorhombic, space group Pbca, with cell constants a = 15.834(2), b = 17.512(4), and c = 18.79(2) A, and Z = 8. The structure was solved and refined to R = 0.041 (R W = 0.040). The structure consists of mononuclear units linked via hydrogen bonds to form the tridimensional pyramid. The geometry of CuN3N*NCl chromophore is distorted square-pyramid. The superoxide-dismutase mimetic activity of the compound is measured and compared with those of the SOD enzyme, the free drug, and other related sulfathiazole complexes.

A Ferromagnetic [Cu3(OH)2]4+ Cluster Formed inside a Tritopic Nonaazapyridinophane: Crystal Structure and Solution Studies†

Chemists working in coordination and/or supramolecular chemistry find a continuous source of inspiration in biomolecules and enzyme active sites. In this respect, trinuclear Cu centers have attracted a lot of interest due to their resemblance to multicenter blue copper oxidases like ascorbate oxidase, ceruloplasmin, lacase oxidase, and particulate methane monooxygenase. These enzymes contain at least four copper centers, which are necessary for four-electron reduction of molecular oxygen to water. For instance, the high-resolution structure of ascorbate oxidase shows that the mononuclear electron-transfer copper site of type 1 (T1) is connected to the trinuclear site through a patch formed by a cysteine residue from which two histidine residues diverge to bind the T3 copper ions. In the oxidized form of the enzyme, the T3 Cu atoms, apart from the imidazole moiety of the histidine residues of the patch, are coordinated by another two imidazole units and by an OH group that bridges the two atoms, which are 3.71 far apart from each other. The geometry around each metal ion can be best described as a trigonal bipyramid with a vacant equatorial position oriented towards the T2 copper atom, which completes the trinuclear center. In the T2 site the Cu center is coordinated in a very particular T-shaped geometry by two histidine residues and a monodentate hydroxo group or a water molecule. The mechanism by which these centers catalyze the fourelectron reduction of molecular dioxygen to water and the magnetic properties of these particular arrangements of copper ions have attracted great interest from both the biochemical and magnetochemical points of view. Therefore, small-molecule studies aimed at mimicking their properties are of great relevance in this respect.

From salts to ionic liquids by systematic structural modifications: a rational approach towards the efficient modular synthesis of enantiopure imidazolium salts.

This paper reports a simple and robust modular synthetic strategy that leads to a large variety of configurationally and structurally diverse imidazole-based chiral ionic liquids (CILs) by lipase-catalyzed resolution. The intimate microscopic interactions of the supramolecular ionic network of these imidazolium chiral salts at the molecular level are investigated both spectroscopically (NMR, FT-IR-ATR) and theoretically, and a topological analysis of the experimental electron densities obtained by X-ray diffraction of single crystals is performed. Our results support the key role played by the relative configuration of the -OR group on the hydrogen-bonding pattern and its strong influence on the final physical properties of the imidazolium salt. We also obtained a reasonable correlation between the observed melting point and the non-covalent interactions. The spectroscopic data and the topological analysis reflect the key role played by hydrogen bonds between the OH and imidazolium C2H groups in both cation-anion and cation-cation interactions, with the presence of an OH group leading to an additional inter-cation interaction. This interaction significantly affects the properties of stereoisomeric salts. Even more interestingly, we also studied the effect of the chirality by comparing enantiopure CILs with their racemic mixtures and found that, with the exception of trans-Cy6-OH-Im-Bn-Br, the melting points of the racemic mixtures are higher than those of the corresponding enantiomerically pure forms. For stereoisomeric examples, we have successfully explained the differences in melting temperatures in light of the corresponding structural data. Chirality should therefore be taken into account as a highly attractive design vector in the preparation of ILs with specifically desired properties.

Enantioselective Desymmetrization of Diphenylphosphinamides via (−)-Sparteine-Mediated Ortho-Lithiation. Synthesis of P-Chiral Ligands

Asymmetric ortho-lithiation of N-dialkyl-P,P-diphenylphosphinamides using [n-BuLi.(-)-sparteine] is described as an efficient method for the synthesis of P-chiral ortho-functionalized derivatives in high yields and ees from 45 to >99%. The method allows access to new enantiomerically pure P-chiral phosphine and diimine ligands.

Metal complexes of sulfanilamide derivatives. Crystal structure of [Zn(sulfathiazole)2]·H2O

Abstract The crystal structure of the Zn(sulfathiazole) 2 ·H 2 O complex is reported. The complex crystallizes in the monoclinic space group C 2/ c . The cell dimensions are a = 9.098(3) A, b = 17.871(5) A, c = 14.61(1) A, β = 99.44(6)°, V = 2343(2) A 3 , Z = 4, and D x = 1.68 g/cm 3 . The final conventional R-factor = 0.027 for 2669 “observed” reflections and 191 variables. The Zn ion is surrounded in a regular tetrahedral arrangement by two N amino and two N thiazole atoms pertaining to four sulfathiazole (Hstz) ligands. Each stz anion, acting as a bidentate ligand, chelates to two Zn ions as a bridge through the N thiazole and the N amino atoms. The IR, 13 C NMR in solid state, 1 H NMR, and 13 C NMR in DMSO d6 solutions spectra are discussed in detail with regard to the crystal structure.

Novel Copper(I) Complexes Containing 1,1‘-Bis(diphenylphosphino)ferrocene (dppf) as a Chelate and Bridging Ligand: Synthesis of Tetrabridged Dicopper(I) Complexes [Cu2(μ-η1-C⋮R)2(μ-dppf)2] and X-ray Crystal Structure of [Cu2(μ-η1-C⋮CC6H4CH3-4)2(μ-dppf)2]

Binuclear copper(I) complexes [Cu(κ2-P,P-dppf)(CH3CN)2][BF4] (1), [Cu(κ2-P,P-dppf)(bipy)][BF4] (2) containing the chelating dppf ligand (dppf = 1,1‘-bis(diphenylphosphino)ferrocene) have been prepared by substitution reactions of the acetonitrile ligands from the complexes [Cu(CH3CN)4][BF4] and (1) with dppf and bipy, respectively. Similarly, the treatment of the complex [Cu2(μ-dppm)2(CH3CN)2][BF4]2 with dppf in CH2Cl2 at room temperature gives the tetranuclear complex [Cu2(μ-dppm)2(κ2-P,P-dppf)2][BF4]2 (3). The analogous bridging chloride tetranuclear complex [Cu2(μ-Cl)2(κ2-P,P-dppf)2] (4) has been also prepared by the addition of dppf to a solution in THF containing an equimolar mixture of CuCl and tetramethylethylenediamine. Complex 4 has been used as a precursor for μ-η1-alkynyl bridging dicopper(I) complexes containing the framework [Cu2(μ-dppf)2]. Complexes [Cu2(μ-η1-C⋮CR)2(μ-dppf)2] (R = C6H4CH3-4 (5), C6H5 (6), CH2OCH3 (7), CH2CH2CH3 (8), (η5-C5H4)Fe(η5-C5H5) (9)) are obtained by the treatment of ...

Multiple hydrogen bonds and tautomerism in naphthyridine derivatives

The behaviour of three 2,7-disubstituted 1,8-naphthyridines able to exhibit tautomerism has been studied by NMR in solution and in two cases in the solid state. The three derivatives studied are 2,7-dihydroxy- (1), 2-acetamido-7-amino- (3) and 2,7-diacetamido-1,8-naphthyridine (4). To explore the problem of secondary interactions, a series of complexes, with up to four simultaneous hydrogen bonds, where the monomers are generated using pyridine and 4-pyridone as building blocks, have been theoretically studied. The calculated interaction energies have been correlated with the number of hydrogen bonds and with attractive and repulsive secondary interactions. Further analysis of the electron density and orbital interactions shows that the secondary interactions, both attractive and repulsive, have a purely electrostatic origin. The X-ray structure of compounds 3 and 4 have been determined. In the solid state these compounds exist in the “diamino” tautomers with the N–H proton of the amido groups pointing towards the naphthyridine nitrogen. DFT and GIAO calculations have been essential to disentangle the problem of the structure of these compounds.