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Dive into the research topics where Sara M. Badenes is active.

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Featured researches published by Sara M. Badenes.


Biotechnology and Bioengineering | 2011

Performance of a cutinase membrane reactor for the production of biodiesel in organic media

Sara M. Badenes; F. Lemos; J. M. S. Cabral

The enzymatic transesterification of oils with an alcohol, using recombinant cutinase of Fusarium solani pisi microencapsulated in sodium bis(2‐ethylhexyl) sulfosuccinate (AOT)/isooctane reversed micelles, was performed in a membrane bioreactor (MBR). A tubular ceramic membrane with a nominal molecular weight cut off of 15,000 Da was used to retain the enzyme, and characterized in terms of rejection coefficients of the reaction components by transmission experiments. The performance of the MBR in a total recirculation‐batch mode was compared with results obtained in a stirred batch tank reactor. The continuous operation of the MBR was also evaluated and the influence of the alcohol type and permeate flow rate on conversion degree and productivity (up to 500 gproduct/day/genzyme was attained) were analyzed. Cutinase wild type and mutant T179C were tested for this process and the high long‐term operational stability of the cutinase mutant demonstrated its potential as biocatalyst for the enzymatic continuous production of biodiesel. Biotechnol. Bioeng. 2011; 108:1279–1289.


PLOS ONE | 2016

Defined Essential 8™ Medium and Vitronectin Efficiently Support Scalable Xeno-Free Expansion of Human Induced Pluripotent Stem Cells in Stirred Microcarrier Culture Systems

Sara M. Badenes; Tiago G. Fernandes; Cláudia S. M. Cordeiro; Shayne Boucher; David Kuninger; Mohan C. Vemuri; Maria Margarida Diogo; J. M. S. Cabral

Human induced pluripotent stem (hiPS) cell culture using Essential 8™ xeno-free medium and the defined xeno-free matrix vitronectin was successfully implemented under adherent conditions. This matrix was able to support hiPS cell expansion either in coated plates or on polystyrene-coated microcarriers, while maintaining hiPS cell functionality and pluripotency. Importantly, scale-up of the microcarrier-based system was accomplished using a 50 mL spinner flask, under dynamic conditions. A three-level factorial design experiment was performed to identify optimal conditions in terms of a) initial cell density b) agitation speed, and c) to maximize cell yield in spinner flask cultures. A maximum cell yield of 3.5 is achieved by inoculating 55,000 cells/cm2 of microcarrier surface area and using 44 rpm, which generates a cell density of 1.4x106 cells/mL after 10 days of culture. After dynamic culture, hiPS cells maintained their typical morphology upon re-plating, exhibited pluripotency-associated marker expression as well as tri-lineage differentiation capability, which was verified by inducing their spontaneous differentiation through embryoid body formation, and subsequent downstream differentiation to specific lineages such as neural and cardiac fates was successfully accomplished. In conclusion, a scalable, robust and cost-effective xeno-free culture system was successfully developed and implemented for the scale-up production of hiPS cells.


Journal of Biotechnology | 2016

Microcarrier-based platforms for in vitro expansion and differentiation of human pluripotent stem cells in bioreactor culture systems

Sara M. Badenes; Tiago G. Fernandes; Carlos A. V. Rodrigues; Maria Margarida Diogo; J. M. S. Cabral

Human pluripotent stem cells (hPSC) have attracted a great attention as an unlimited source of cells for cell therapies and other in vitro biomedical applications such as drug screening, toxicology assays and disease modeling. The implementation of scalable culture platforms for the large-scale production of hPSC and their derivatives is mandatory to fulfill the requirement of obtaining large numbers of cells for these applications. Microcarrier technology has been emerging as an effective approach for the large scale ex vivo hPSC expansion and differentiation. This review presents recent achievements in hPSC microcarrier-based culture systems and discusses the crucial aspects that influence the performance of these culture platforms. Recent progress includes addressing chemically-defined culture conditions for manufacturing of hPSC and their derivatives, with the development of xeno-free media and microcarrier coatings to meet good manufacturing practice (GMP) quality requirements. Finally, examples of integrated platforms including hPSC expansion and directed differentiation to specific lineages are also presented in this review.


Biotechnology Journal | 2018

Dissolvable Microcarriers Allow Scalable Expansion And Harvesting Of Human Induced Pluripotent Stem Cells Under Xeno-Free Conditions

André L. Rodrigues; Carlos A. V. Rodrigues; Ana Rita Gomes; Sara Filipa Vieira; Sara M. Badenes; Maria Margarida Diogo; J. M. S. Cabral

The development of bioprocesses capable of producing large numbers of human induced pluripotent stem cells (hiPSC) in a robust and safe manner is critical for the application of these cells in biotechnological and medical applications. Scalable expansion of hiPSC is often performed using polystyrene microcarriers, which have to be removed from the cell suspension using a separation step that causes loss of viable cells. In this study, application of novel xeno-free dissolvable microcarriers (DM) for an efficient and integrated expansion and harvesting of hiPSC is demonstrated. After an initial screening under static conditions, hiPSC culture using DM is performed in dynamic culture, using spinner-flasks. A maximum 4.0 ± 0.8-fold expansion is achieved after 5 days of culture. These results are validated with a second cell line and the culture is successfully adapted to fully xeno-free conditions. Afterwards, cell recovery is made within the spinner flask, being obtained a 92 ± 4% harvesting yield, which is significantly higher than the one obtained for the conventional filtration-based method (45 ± 3%). Importantly, the expanded and harvested hiPSC maintain their pluripotency and multilineage differentiation potential. The results here described represent a significant improvement of the downstream processing after microcarrier-based hiPSC expansion, leading to a more cost-effective and efficient bioprocess.


Biocatalysis and Biotransformation | 2013

Biocatalytic transesterification of triglycerides and alcohols for the production of biodiesel using cutinase in organic media

Francisco Moreira; Sara M. Badenes; J. M. S. Cabral

Abstract The worlds energy supply is mainly composed of fossil fuels, which are a non-renewable source of energy that is rapidly running out. To overcome this concern, industry has been focusing on the production of biofuels such as biodiesel. A range of approaches has been considered to transform oils into applicable biodiesel: dilutions, microemulsifications, pyrolysis and transesterification. The latter method consists of the conversion of triglycerides to a mixture of alkyl esters and glycerol, in the presence of an acyl acceptor and a catalyst. Due to high selectivity when using enzymes as catalysts, and mild operating conditions, biocatalytic transesterification has proven to be an efficient method. Cutinase, from the superfamily α/β hydrolases, is an enzyme with lipolytic activity that effectively catalyses transesterification reactions. This article highlights the use of cutinase microencapsulated in bis(2ethylhexyl) sodium sulfosuccinate (AOT)-reversed micelles to perform the biocatalytic transesterification of triglycerides, with low chain-length alcohols (e.g. methanol), in organic media to produce biodiesel.


Biotechnology Letters | 2010

Transesterification of oil mixtures catalyzed by microencapsulated cutinase in reversed micelles

Sara M. Badenes; F. Lemos; J. M. S. Cabral


Bioprocess and Biosystems Engineering | 2011

Kinetics and mechanism of the cutinase-catalyzed transesterification of oils in AOT reversed micellar system

Sara M. Badenes; Francisco Lemos; J. M. S. Cabral


Journal of Chemical Technology & Biotechnology | 2010

Assessing the use of cutinase reversed micellar catalytic system for the production of biodiesel from triglycerides.

Sara M. Badenes; F. Lemos; J. M. S. Cabral


Journal of Chemical Technology & Biotechnology | 2011

Stability of cutinase, wild type and mutants, in AOT reversed micellar system - effect of mixture components of alkyl esters production.

Sara M. Badenes; F. Lemos; J. M. S. Cabral


Journal of Chemical Technology & Biotechnology | 2017

Long‐term expansion of human induced pluripotent stem cells in a microcarrier‐based dynamic system

Sara M. Badenes; Tiago G. Fernandes; Cláudia C. Miranda; Annette Pusch-Klein; Simone Haupt; Carlos A. V. Rodrigues; Maria Margarida Diogo; Oliver Brüstle; J. M. S. Cabral

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J. M. S. Cabral

Instituto Superior Técnico

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F. Lemos

Instituto Superior Técnico

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Tiago G. Fernandes

Instituto Superior Técnico

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Ana Rita Gomes

Instituto Superior Técnico

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