Sarita Shah

Development of a standardized screening rule for tuberculosis in people living with HIV in resource-constrained settings: individual participant data meta-analysis of observational studies.

Haileyesus Getahun and colleagues report the development of a simple, standardized tuberculosis (TB) screening rule for resource-constrained settings, to identify people living with HIV who need further investigation for TB disease.

Consensus Statement on Research Definitions for Drug-Resistant Tuberculosis in Children

Few children with drug-resistant (DR) tuberculosis (TB) are identified, diagnosed, and given an appropriate treatment. The few studies that have described this vulnerable population have used inconsistent definitions. The World Health Organization (WHO) definitions used for adults with DR-TB and for children with drug-susceptible TB are not always appropriate for children with DR-TB. The Sentinel Project on Pediatric Drug-Resistant Tuberculosis was formed in 2011 as a network of experts and stakeholders in childhood DR-TB. An early priority was to establish standardized definitions for key parameters in order to facilitate study comparisons and the development of an evidence base to guide future clinical management. This consensus statement proposes standardized definitions to be used in research. In particular, it suggests consistent terminology, as well as definitions for measures of exposure, drug resistance testing, previous episodes and treatment, certainty of diagnosis, site and severity of disease, adverse events, and treatment outcome.

Blood cultures for the diagnosis of multidrug-resistant and extensively drug-resistant tuberculosis among HIV-infected patients from rural South Africa: a cross-sectional study.

BackgroundThe yield of mycobacterial blood cultures for multidrug-resistant (MDR) and extensively drug-resistant tuberculosis (XDR-TB) among drug-resistant TB suspects has not been described.MethodsWe performed a retrospective, cross-sectional analysis to determine the yield of mycobacterial blood cultures for MDR-TB and XDR-TB among patients suspected of drug-resistant TB from rural South Africa. Secondary outcomes included risk factors of Mycobacterium tuberculosis bacteremia and the additive yield of mycobacterial blood cultures compared to sputum culture.ResultsFrom 9/1/2006 to 12/31/2008, 130 patients suspected of drug-resistant TB were evaluated with mycobacterial blood culture. Each patient had a single mycobacterial blood culture with 41 (32%) positive for M. tuberculosis, of which 20 (49%) were XDR-TB and 8 (20%) were MDR-TB. One hundred fourteen (88%) patients were known to be HIV-infected. Patients on antiretroviral therapy were significantly less likely to have a positive blood culture for M. tuberculosis (p = 0.002). The diagnosis of MDR or XDR-TB was made by blood culture alone in 12 patients.ConclusionsMycobacterial blood cultures provided an additive yield for diagnosis of drug-resistant TB in patients with HIV from rural South Africa. The use of mycobacterial blood cultures should be considered in all patients suspected of drug-resistant TB in similar settings.

1474Genotypic Characterization of pncA Gene in Patients with Multidrug-resistant Tuberculosis from South Africa

Rationale: Pyrazinamide (PZA) is an essential component of empiric firstand second-line tuberculosis (TB) treatment regimens. However, PZA drug susceptibility testing (DST) is difficult to perform and not routinely available. Genetic mutations in the pncA gene of Mycobacterium tuberculosis (Mtb) commonly confer PZA resistance, but limited data on the prevalence and diversity of these mutations are available from clinical populations of TB patients. We sequenced pncA to estimate PZA resistance among MDR and XDR TB patients in KwaZulu-Natal province, South Africa. Methods: We prospectively enrolled 206 MDR TB and 377 XDR TB patients from September 2011 to September 2014. Sputum collected from each participant underwent mycobacterial culture and DST for isoniazid (H), rifampin (R), streptomycin (S), kanamycin (Km) and ofloxocin (Ofx). We extracted DNA from pure Mtb isolates and performed targeted sequencing of the pncA gene, characterizing the proportion, frequency and structure of polymorphisms. Results: To date, targeted sequencing has been completed for 314 isolates from 80 MDR TB (16 resistant to HR 20 different mutations were seen among MDR TB subjects, of which, only 7 were seen in more than one participant. Among XDR TB participants, one mutation (insertion of cytosine after the 456 locus) was present in 166 (71%), consistent with the clonality of XDR TB patients in KwaZulu-Natal. Conclusion: Nearly 70% of MDR TB and nearly all XDR TB participants had pncA mutations, and likely PZA resistance, in our cohort. A wide diversity of mutations was seen. Most mutations were singlets, suggesting acquisition of mutations de novo, perhaps due to empiric use. One specific mutation was common among XDR TB participants, but it occurred in conjunction with a specific RFLP genotype associated with clonal expansion. Given the difficulty in determining PZA susceptibility, characterizing pncA mutations may provide important data for developing rapid genotypic PZA susceptibility assays. BACKGROUND • South Africa has one of the highest incidence rates of multidrug-resistant tuberculosis (MDR TB) and extensively drug-resistant tuberculosis (XDR TB) with high rates of HIV co-infection. • Pyrazinamide (PZA) is used empirically in drug-resistant TB treatment regimens. • Precise acidic conditions are required in vitro to conduct PZA drug susceptibility testing (DST). However, acidic environments inhibit the growth of Mycobacterium tuberculosis (Mtb) bacilli. • Therefore, conventional PZA DST is difficult to perform in vitro and not widely available. • Gene sequencing is an effective method to identify mutations associated with resistance for some firstand second-line anti-TB drugs. • Genetic mutations in the pncA gene of Mtb typically confer resistance to PZA. However data on the frequency and diversity of pncA mutations is limited. • Thus, the actual prevalence of PZA resistance in patients with TB and drug-resistant TB is unknown. Funding: NIH/NIAID R01AI087465 [PI Neel Gandhi] and NIH/NIAID R01AI089349 [PI Neel Gandhi] Contact: Salim Allana, MD, MPH; salim.allana@emory.edu SETTING • Study site: KwaZulu-Natal province, South Africa, which has a population of 10.2 million. • TB incidence rate is nearly 1,100 per 100,000 population, and more than 80% of TB cases are HIV co-infected. • In 2012, MDR TB incidence was 45 cases/100,000 population and XDR TB incidence was 3.1 cases/100,000 population. • The HIV prevalence among adults (15-49 years of age) is 16.8%. • MDR TB patients receive standardized second-line treatment which includes PZA, ethambutol, kanamycin, moxifloxacin, terizidone, and ethionamide. • XDR TB patients receive a similar regimen, except that capreomycin, moxifloxacin and PAS replace kanamycin. • DST testing to evaluate PZA susceptibility is not routinely performed in this setting. OBJECTIVE Among MDR and XDR TB subjects in KwaZulu-Natal province, South Africa: • To characterize the frequency and diversity of polymorphisms in the pncA gene. • To estimate the prevalence of pyrazinamide resistance.