Sean McMahon

Weighing the deep continental biosphere

There is abundant evidence for widespread microbial activity in deep continental fractures and aquifers, with important implications for biogeochemical cycling on Earth and the habitability of other planetary bodies. Whitman et al. (P Natl Acad Sci USA, 95, 1998, 6578) estimated a continental subsurface biomass on the order of 10(16) -10(17) g C. We reassess this value in the light of more recent data including over 100 microbial population density measurements from groundwater around the world. Making conservative assumptions about cell carbon content and the ratio of attached and free-living microorganisms, we find that the evidence continues to support a deep continental biomass estimate of 10(16) -10(17) g C, or 2-19% of Earths total biomass.

Evidence for methane in Martian meteorites

The putative occurrence of methane in the Martian atmosphere has had a major influence on the exploration of Mars, especially by the implication of active biology. The occurrence has not been borne out by measurements of atmosphere by the MSL rover Curiosity but, as on Earth, methane on Mars is most likely in the subsurface of the crust. Serpentinization of olivine-bearing rocks, to yield hydrogen that may further react with carbon-bearing species, has been widely invoked as a source of methane on Mars, but this possibility has not hitherto been tested. Here we show that some Martian meteorites, representing basic igneous rocks, liberate a methane-rich volatile component on crushing. The occurrence of methane in Martian rock samples adds strong weight to models whereby any life on Mars is/was likely to be resident in a subsurface habitat, where methane could be a source of energy and carbon for microbial activity.

The ‘Tully monster’ is a vertebrate

Problematic fossils, extinct taxa of enigmatic morphology that cannot be assigned to a known major group, were once a major issue in palaeontology. A long-favoured solution to the ‘problem of the problematica’, particularly the ‘weird wonders’ of the Cambrian Burgess Shale, was to consider them representatives of extinct phyla. A combination of new evidence and modern approaches to phylogenetic analysis has now resolved the affinities of most of these forms. Perhaps the most notable exception is Tullimonstrum gregarium, popularly known as the Tully monster, a large soft-bodied organism from the late Carboniferous Mazon Creek biota (approximately 309–307 million years ago) of Illinois, USA, which was designated the official state fossil of Illinois in 1989. Its phylogenetic position has remained uncertain and it has been compared with nemerteans, polychaetes, gastropods, conodonts, and the stem arthropod Opabinia. Here we review the morphology of Tullimonstrum based on an analysis of more than 1,200 specimens. We find that the anterior proboscis ends in a buccal apparatus containing teeth, the eyes project laterally on a long rigid bar, and the elongate segmented body bears a caudal fin with dorsal and ventral lobes. We describe new evidence for a notochord, cartilaginous arcualia, gill pouches, articulations within the proboscis, and multiple tooth rows adjacent to the mouth. This combination of characters, supported by phylogenetic analysis, identifies Tullimonstrum as a vertebrate, and places it on the stem lineage to lampreys (Petromyzontida). In addition to increasing the known morphological disparity of extinct lampreys, a chordate affinity for T. gregarium resolves the nature of a soft-bodied fossil which has been debated for more than 50 years.

Experimental evidence that clay inhibits bacterial decomposers: Implications for preservation of organic fossils

Exceptionally preserved organic fossils are commonly associated with clay-rich horizons or directly with clay minerals. It has been posited that interactions between clay minerals and organic tissues inhibit enzymatic reactions or protect carcasses in such a way that decay is impeded. However, interactions between clay minerals and the biological agents of decay, especially bacteria, may be at least as important to preservation potential. Here we show that clays of particle size <2 μm in suspensions exceeding 10 mg/ml in concentration inhibit the growth of Pseudoalteromonas luteoviolacea , a marine heterotrophic bacterium involved in the decay of marine animals. Such clay-microbe interactions can contribute to exceptional preservation, and specific examples may play a role in shaping the distribution of Konservat-Lagerstatten through time.

Physical and Chemical Controls on Habitats for Life in the Deep Subsurface Beneath Continents and Ice

The distribution of life in the continental subsurface is likely controlled by a range of physical and chemical factors. The fundamental requirements are for space to live, carbon for biomass and energy for metabolic activity. These are inter-related, such that adequate permeability is required to maintain a supply of nutrients, and facies interfaces invite colonization by juxtaposing porous habitats with nutrient-rich mudrocks. Viable communities extend to several kilometres depth, diminishing downwards with decreasing porosity. Carbon is contributed by recycling of organic matter originally fixed by photosynthesis, and chemoautotrophy using crustal carbon dioxide and methane. In the shallow crust, the recycled component predominates, as processed kerogen or hydrocarbons, but abiotic carbon sources may be significant in deeper, metamorphosed crust. Hydrogen to fuel chemosynthesis is available from radiolysis, mechanical deformation and mineral alteration. Activity in the subcontinental deep biosphere can be traced through the geological record back to the Precambrian. Before the colonization of the Earths surface by land plants, a geologically recent event, subsurface life probably dominated the planets biomass. In regions of thick ice sheets the base of the ice sheet, where liquid water is stable and a sediment layer is created by glacial erosion, can be regarded as a deep biosphere habitat. This environment may be rich in dissolved organic carbon and nutrients accumulated from dissolving ice, and from weathering of the bedrock and the sediment layer.

Sampling methane in basalt on Earth and Mars

If confirmed, the extremely low concentrations of methane (CH4) detected in the Martian atmosphere may represent reservoirs and emission processes that would normally be considered negligible on Earth. One such process is the release of ancient volatiles from fluid inclusions and interstitial sites in rocks and minerals during erosion or geothermal activity. Using a highly sensitive rock-crushing and mass-spectrometry technique previously shown to detect CH4 in serpentinites and hydrothermal mineral deposits, we have demonstrated that CH4 and other ancient volatiles can be recovered from basalt, the dominant rocktype on the Martiansurface. Basalt samples fromawide range of ages and geological systems were tested, all of which released CH4 when crushed. Oxidative weathering was associated with lower quantities of CH4. Otherwise, CH4 recoverability showed no relationship with age or geological context. Mineral veins, cross-cutting one locality were found to share the volatile composition of the basalt. In general, the results suggest that CH4-release from ancient basalts could be a significant process on Mars, which could be further investigated by Martian rovers using a similar rock-crushing and mass spectrometry technique in situ. Received 13 April 2012, accepted 1 November 2012, first published online 2 January 2013

Detection of reduced carbon in a basalt analogue for martian nakhlite: a signpost to habitat on Mars

C. W. Taylor and J. Still are thanked for skilled technical support. J. Parnell, H.G.M. Edwards, I. Hutchinson and R. Ingley acknowledge the support of the UKSA and the STFC Research Council in the UK ExoMars programme. L. V. Harris and S. McMahon acknowledge STFC studentship funding.

The origin and occurrence of subaqueous sedimentary cracks

Abstract The rock record attests that sediments have cracked at or below the sediment–water interface in strictly subaqueous settings throughout Earth history. In recent decades, a number of hypotheses have been advanced to explain this phenomenon, but these are widely regarded as being mutually exclusive and there is little consensus about which model is correct. In this paper, we first review the geometries, lithologies and range of facies in which subaqueous sedimentary cracks occur in the geological record, with particular attention to cracks in carbonates. We then evaluate current models for subaqueous cracking, emphasizing that different models may be correct with respect to different sets of cracks, but that cracking is generally a two-step process involving sediment stabilization prior to disruption. We also present the results of some simple new experiments designed to test the dominant models of crack formation. These results demonstrate for the first time that microbial mats can produce thin, shallow cracks at the sediment–water interface. We conclude that the presence of cracks in marine, brackish and lacustrine rocks should not be used uncritically to infer fluctuations in salinity in the depositional environment. Supplementary material: A video showing a micro-CT scan of a hand-sample from the Monteville Formation, South Africa is available at https://doi.org/10.6084/m9.figshare.c.3580673

Sampling methane in hydrothermal minerals on Earth and Mars

The source of Martian atmospheric methane is unknown. On Earth, hydrothermal mineral deposits contain ancient methane together with a host of chemical and geological lines of evidence for the mechanism of gas production. Such deposits are therefore potentially attractive sampling sites on Mars. In order to evaluate this potential, hydrothermal calcite veins were sampled across the Caithness region of Scotland and analysed for methane by an incremental-crushing mass spectrometry technique that may be adaptable to Mars rovers. Methane was detected in all samples. Variations in the quantity of methane released were found to relate directly to the geological history of the localities. Calcite particle size was found to affect measurements in a systematic and informative way. Oxidative weathering had no discernable effect on methane recoverability. These results suggest that the technique is sensitive and informative enough to deserve consideration for missions to Mars.

DECAY OF THE SEA ANEMONE METRIDIUM (ACTINIARIA): IMPLICATIONS FOR THE PRESERVATION OF CNIDARIAN POLYPS AND OTHER SOFT-BODIED DIPLOBLAST-GRADE ANIMALS

Abstract: Fossils preserving the anatomy of soft tissues provide rare but essential evidence for the reconstruction of metazoan evolutionary history. Decay is inherent to the fossilization process and features may be distorted, displaced, or missing even in exceptionally preserved fossils, and non-anatomical artifacts may be introduced. Here we describe the results of experimental decay of the epibenthic actinian (sea anemone) Metridium senile and document serial changes in its morphology. Decay proceeded rapidly and followed a consistent, reproducible trajectory, which we divide into six stages; in the final stage, no anatomically illuminating information remained. The column, one of the most salient anatomical features of actinians, contracted near the time of death and changed shape dramatically thereafter. The tentacles decayed from their distal ends. Fibrous bundles representing the interior musculature were among the morphological features most resistant to degradation, and taphonomically induced transverse bands were also long lasting. These experimental results provide a semi-quantitative and predictive framework which can be applied to the interpretation of putative polypoid cnidarian organisms. Furthermore, this decay series shows that diploblast- and triploblast-grade fossils are unlikely to be confused and provides the means to evaluate the taxonomic validity of the long-standing assumption that many enigmatic soft-bodied Ediacaran and lower Cambrian taxa are of actinian grade.