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Dive into the research topics where Shaoli Yang is active.

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Featured researches published by Shaoli Yang.


PLOS ONE | 2010

Interaction between Thymidylate Synthase and Its Cognate mRNA in Zebrafish Embryos

Yuyan Zhang; Shaoli Yang; Ming Liu; Chunxia Song; Ning Wu; Peixue Ling; Edward Chu; Xiukun Lin

Thymidylate synthase (TS), which catalyzes the de novo synthesis of dUMP, is an important target for cancer therapy. In this report, the effects of 5-fluorouracil (5-FU) and ZD1694 on the regulation of TS gene expression were evaluated in zebrafish embryos. Our results revealed that the expression of TS was increased by about six-fold when embryos were treated with 1.0 µM 5-FU and there was a greater than 10-fold increase in the TS protein level after treatment with 0.4 µM ZD1694. Northern blot analysis confirmed that expression of TS mRNA was identical in treated or untreated embryos. Gel shift and immunoprecipitation assays revealed that zebrafish TS was specifically bound with its cognate mRNA in vitro and in vivo. We identified a 20 nt RNA sequence, TS:N20, localized to the 5′-UTR of TS mRNA, which corresponded to nt 13–32; TS:N20 bound to the TS protein with an affinity similar to that of the full-length TS mRNA. The MFold program predicted that TS:N20 formed a stable stem-loop structure similar to that of the cis-acting element found in human TS mRNA. Variant RNAs with either a deletion or mutation in the core motif of TS:N20 were unable to bind to the TS protein. In vitro translation experiments, using the rabbit lysate system, confirmed that zebrafish TS mRNA translation was significantly repressed when an excess amount of TS protein was included in the system. Additionally, a TS stability experiment confirmed that treatment of zebrafish embryos with 5-FU could increase the TS stability significantly, and the half life of TS protein was about 2.7 times longer than in untreated embryos. Our study revealed a structural requirement for the interaction of TS RNA with TS protein. These findings also demonstrated that the increase in TS protein induced by 5-FU occurs at the post-transcriptional level and that increased stability and translation efficiency both contributed to the increase in TS protein levels induced by TS inhibitors.


Russian Journal of Genetics | 2009

VEGF gene silencing by cytomegalovirus promoter driven ShRNA expression vector results in vascular development defects in zebrafish

Shaoli Yang; Song Yan; Rongli Niu; XiuKun Lin

Zebrafish has been generally considered as an excellent model in case of drug screening, disease model establishment, and vertebrate embryonic development study. In this work, the ability of human cytomegalovirus immediate early promoter (CMV promoter)-driven short hairpin RNA (shRNA) expression vector to induce shRNA against VEGF gene in zebrafish was tested, and its effect on vascular development was assed, too. Using RT-qPCR, blood vessel staining, and in situ hybridization, we confirmed certain transcriptional activity and down regulation of gene expression by the vector. In situ hybridization analysis indicated selective inhibition of NRP1 expression in the VEGF gene loss of function model, which might imply in turn that VEGF could not only activate endothelial cells directly but also could contribute to stimulating angiogenesis in vivo by a mechanism that involved up-regulation of its cognate receptor expression in zebrafish. This contributed to a better understanding of molecular mechanisms of cardiovascular development. The system improved the success rate in making inducible knockdown and widened the possibilities for better therapeutic targets in zebrafish.


Biologia | 2009

Suppression of zebrafish VEGF gene by cytomegalovirus promoter-driven short hairpin constructs induces vascular development defects and down regulation NRP1 expression

Shaoli Yang; Song Yan; Song Qin; XiuKun Lin

The usage of RNA interference for gene knockdown in zebrafish through expression of the small interfering RNA mediators from DNA vectors has created a lot of excitement in the research community. In this work, the ability of human cytomegalovirus immediate early promoter (CMV promoter)-driven short hairpin RNA (shRNA) expression vector to induce shRNA against vascular endothelial growth factor (VEGF) gene in zebrafish was tested, and its effects on VEGF-mediated vasculogenesis and angiogenesis were evaluated. Altogether four vectors targeting various locations of VEGF gene were constructed, and pSI-V4 was proven to be the most effective one. Microinjection of pSI-V4 into the zebrafish embryos resulted in defective vascular formation and down regulation of VEGF expression. In situ hybridization analysis indicated that silencing VEGF gene expression by pSI-V4 resulted in down regulation of neuropilin-1 (NRP1), a potent VEGF receptor. Knockdown of VEGF expression by morpholino gave the same result. This provided evidence that the VEGF-mediated angiogenesis in zebrafish was in part dependent on NRP1 expression. The results contributed to a better understanding of molecular mechanisms of cardiovascular development and provided a potential promoter for making inducible knockdown in zebrafish.


international conference on bioinformatics and biomedical engineering | 2009

The Moisture Absorption and Retention Abilities of Hyaluronan, Chitosan, Starch and Their Quaternary Derivatives

Shaoli Yang; Zhanyong Guo; Qinzhao Xue; Fengping Miao; Yan Wang; Song Qin

Quaternary ammonium salt of hyaluronan (QHA), quaternary ammonium salt of starch (QS), and quaternary ammonium salt of chitosan (QCTS) were successfully prepared. Infrared spectroscopy (IR), 1H NMR and 13C NMR techniques were used to characterize the molecular structure of QHA. Results showed that QHA had better moisture absorption abilities than HA both at 43% and 81% RH. QS and QCTS had the same tendency. In addition, the three quaternized polysaccharides had better moisture retention abilities than their corresponding polysaccharides under three humidity conditions: 81% RH, 43% RH and dry condition. The -N+ (CH 3 ) 3 group played a very important role in moisture-absorption and retention ability of the quaternized polysaccharides. QCTS and QHA showed parallel or better R a and R h than that of HA, and had potential to use as moisture-retention ingredient, e. g., in cosmetics.


international conference on bioinformatics and biomedical engineering | 2009

The Moisture Absorption and Retention Abilities of Quaternized Carboxymethyl Chitosan

Fengping Miao; Zhanyong Guo; Yuetao Yi; Shaoli Yang

Different types of quaternized carboxymethyl chitosans (QCMCs) were prepared in this study. The moisture absorption abilities of each QCMCs were measured at 81% and 43% relative humidity (RH), and the moisture retention abilities were done at 81% RH, at 43% RH and in silica gel. Hyaluronic acid (HA) was used as control in each condition. Results showed that, both at 81% and 43% RH, each QCMCs had better properties both in moisture absorption and retention than HA. And in silica gel, the moisture retention ability of each QCMCs was better than or close to that of HA. Therefore, it is hopeful that certain of the QCMCs would replace HA as the moisture absorption and retention ingredient in


Biochemical and Biophysical Research Communications | 2007

N-acetylchitooligosaccharide is a potent angiogenic inhibitor both in vivo and in vitro

Zheng Wang; Lanhong Zheng; Shaoli Yang; Rongli Niu; Edward Chu; XiuKun Lin


Archive | 2009

Application of compound carboxymethyl inulin

Zhanyong Guo; Jingli Liu; Fang Dong; Fengping Miao; Shaoli Yang


Archive | 2009

Moisture absorption humectant employing trehalose quaternary ammonium salt and preparation thereof

Zhanyong Guo; Shaoli Yang; Qinzhao Xue; Gang Wang; Fengping Miao; Yuetao Yi; Yan Wang


Archive | 2008

Application of carboxymethyl chitosan quaternary ammonium salt as moisture absorption humectant

Zhanyong Guo; Fengping Miao; Yuetao Yi; Yan Wang; Shaoli Yang


international conference on bioinformatics and biomedical engineering | 2011

Method of mRNA Display for Selecting Peptides That Bind with Target Enzyme RNA

Song Yan; Zheng Wang; Shaoli Yang; Yi Zhang; XiuKun Lin

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Fengping Miao

Chinese Academy of Sciences

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Zhanyong Guo

Chinese Academy of Sciences

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XiuKun Lin

Chinese Academy of Sciences

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Yuetao Yi

Chinese Academy of Sciences

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Fang Dong

Chinese Academy of Sciences

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Jingli Liu

Chinese Academy of Sciences

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Qinzhao Xue

Chinese Academy of Sciences

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Song Yan

Dalian Jiaotong University

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Gang Wang

Chinese Academy of Sciences

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Rongli Niu

Chinese Academy of Sciences

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