Shigeru Amemiya
University of Pittsburgh
Network
Latest external collaboration on country level. Dive into details by clicking on the dots.
Publication
Featured researches published by Shigeru Amemiya.
Reviews in Analytical Chemistry | 2008
Shigeru Amemiya; Allen J. Bard; Fu-Ren F. Fan; Michael V. Mirkin; Patrick R. Unwin
This review describes work done in scanning electrochemical microscopy (SECM) since 2000 with an emphasis on new applications and important trends, such as nanometer-sized tips. SECM has been adapted to investigate charge transport across liquid/liquid interfaces and to probe charge transport in thin films and membranes. It has been used in biological systems like single cells to study ion transport in channels, as well as cellular and enzyme activity. It is also a powerful and useful tool for the evaluation of the electrocatalytic activities of different materials for useful reactions, such as oxygen reduction and hydrogen oxidation. SECM has also been used as an electrochemical tool for studies of the local properties and reactivity of a wide variety of materials, including metals, insulators, and semiconductors. Finally, SECM has been combined with several other nonelectrochemical techniques, such as atomic force microscopy, to enhance and complement the information available from SECM alone.
Analytical Chemistry | 1999
Shigeru Amemiya; Philippe Bühlmann; Yoshio Umezawa; Raymond C. Jagessar; Dennis H. Burns
An ion-selective electrode for acetate based on (α,α,α,α)-5,10,15,20-tetrakis[2-(4-fluorophenylureylene)phenyl]porphyrin as an ionophore that has no metal center and forms hydrogen bonds to the analyte is described. At pH 7.0 (0.1 M HEPES-NaOH buffer), the electrode based on this ionophore and cationic sites (50 mol % relative to the ionophore) responds to acetate in a linear range from 1.58 × 10(-)(4) to 1.58 × 10(-)(2) M with a slope of -54.8 ± 0.8 mV/decade and a detection limit of (3.06 ± 1.15) × 10(-)(5) M. Selectivity coefficients determined with the separate solution method (SSM) indicate that interferences of hydrophobic inorganic anions are relatively small (log[Formula: see text] (SSM): NO(3)(-), +0.68; SCN(-), +0.60; NO(2)(-), +0.22; I(-), +0.20; ClO(4)(-), +0.12; Br(-), -0.13). Responses to anions that are good hydrogen bond acceptors, i.e., Cl(-), HSO(3)(-), and HCO(3)(-), were Nernstian and were weaker than the response to acetate (log[Formula: see text] (SSM): -0.54, -0.56, and -1.34, respectively). Negligibly small responses were observed for very hydrophilic anions, i.e., F(-), SO(4)(2)(-), and H(2)PO(4)(-)/HPO(4)(2)(-). While aliphatic carboxylates such as formate, propanoate, pyruvate, and lactate gave Nernstian responses similar to acetate, interferences of salicylate and benzoate were considerably decreased in comparison with electrodes based on cationic sites only. Concentrations of acetic acid in vinegar samples were determined by direct potentiometry and agreed with values determined by a standard enzymatic method.
Journal of the American Chemical Society | 2009
Ping Jing; Patrick J. Rodgers; Shigeru Amemiya
Here we report on remarkably high lipophilicity of perfluoroalkyl carboxylate and sulfonate. A lipophilic nature of this emerging class of organic pollutants has been hypothesized as an origin of their bioaccumulation and toxicity. Both carboxylate and sulfonate, however, are considered hydrophilic while perfluroalkyl groups are not only hydrophobic but also oleophobic. Partition coefficients of a homologous series of perfluoroalkyl and alkyl carboxylates between water and n-octanol were determined as a measure of their lipophilicity by ion-transfer cyclic voltammetry. Very similar lipophilicity of perfluoroalkyl and alkyl chains with the same length is demonstrated experimentally for the first time by fragment analysis of the partition coefficients. This finding is important for pharmaceutical and biomedical applications of perfluoroalkyl compounds. Interestingly, approximately 2 orders of magnitude higher lipophilicity of a perfluoroalkyl carboxylate or sulfonate in comparison to its alkyl counterpart is ascribed nearly exclusively to their oxoanion groups. The higher lipophilicity originates from a strong electron-withdrawing effect of the perfluoroalkyl group on the adjacent oxoanion group, which is weakly hydrated to decrease its hydrophilicity. In fact, the inductive effect is dramatically reduced for a fluorotelomer with an ethylene spacer between perfluorohexyl and carboxylate groups, which is only as lipophilic as its alkyl counterpart, nonanoate, and is 400 times less lipophilic than perfluorononanoate. The high lipophilicity of perfluoroalkyl carboxylate and sulfonate implies that their permeation across such a thin lipophilic membrane as a bilayer lipid membrane is limited by their transfer at a membrane/water interface. The limiting permeability is lower and less dependent on their lipophilicity than the permeability controlled by their diffusion in the membrane interior as assumed in the classical solubility-diffusion model.
Analytical Chemistry | 2012
Jiyeon Kim; Mei Shen; Nikoloz Nioradze; Shigeru Amemiya
The control of a nanometer-wide gap between tip and substrate is critical for nanoscale applications of scanning electrochemical microscopy (SECM). Here, we demonstrate that the stability of the nanogap in ambient conditions is significantly compromised by the thermal expansion and contraction of components of an SECM stage upon a temperature change and can be dramatically improved by suppressing the thermal drift in a newly developed isothermal chamber. Air temperature in the chamber changes only at ~.2 mK/min to remarkably and reproducibly slow down the drift of tip-substrate distance to ~0.4 nm/min in contrast to 5-150 nm/min without the chamber. Eventually, the stability of the nanogap in the chamber is limited by its fluctuation with a standard deviation of ±0.9 nm, which is mainly ascribed to the instability of a piezoelectric positioner. The subnanometer scale drift and fluctuation are measured by forming a ~20 nm-wide gap under the 12 nm-radius nanopipet tip based on ion transfer at the liquid/liquid interface. The isothermal chamber is useful for SECM and, potentially, for other scanning probe microscopes, where thermal-drift errors in vertical and lateral probe positioning are unavoidable by the feedback-control of the probe-substrate distance.
Analytical Chemistry | 2013
Nikoloz Nioradze; Ran Chen; Jiyeon Kim; Mei Shen; Padmanabhan Santhosh; Shigeru Amemiya
Glass-sealed Pt electrodes with submicrometer and nanometer size have been successfully developed and applied for nanoscale electrochemical measurements such as scanning electrochemical microscopy (SECM). These small electrodes, however, are difficult to work with because they often lose a current response or give a low SECM feedback in current-distance curves. Here we report that these problems can be due to the nanometer-scale damage that is readily and unknowingly made to the small tips in air by electrostatic discharge or in electrolyte solution by electrochemical etching. The damaged Pt electrodes are recessed and contaminated with removed electrode materials to lower their current responses. The recession and contamination of damaged Pt electrodes are demonstrated by scanning electron microscopy and X-ray energy dispersive spectroscopy. The recessed geometry is noticeable also by SECM but is not obvious from a cyclic voltammogram. Characterization of a damaged Pt electrode with recessed geometry only by cyclic voltammetry may underestimate electrode size from a lower limiting current owing to an invalid assumption of inlaid disk geometry. Significantly, electrostatic damage can be avoided by grounding a Pt electrode and nearby objects, most importantly, an operator as a source of electrostatic charge. Electrochemical damage can be avoided by maintaining potentiostatic control of a Pt electrode without internally disconnecting the electrode from a potentiostat between voltammetric measurements. Damage-free Pt electrodes with submicrometer and nanometer sizes are pivotal for reliable and quantitative nanoelectrochemical measurements.
Journal of the American Chemical Society | 2012
Mei Shen; Ryoichi Ishimatsu; Jiyeon Kim; Shigeru Amemiya
Here we report on the unprecedentedly high resolution imaging of ion transport through single nanopores by scanning electrochemical microscopy (SECM). The quantitative SECM image of single nanopores allows for the determination of their structural properties, including their density, shape, and size, which are essential for understanding the permeability of the entire nanoporous membrane. Nanoscale spatial resolution was achieved by scanning a 17 nm radius pipet tip at a distance as low as 1.3 nm from a highly porous nanocrystalline silicon membrane in order to obtain the peak current response controlled by the nanopore-mediated diffusional transport of tetrabutylammonium ions to the nanopipet-supported liquid-liquid interface. A 280 nm × 500 nm image resolved 13 nanopores, which corresponds to a high density of 93 nanopores/μm(2). A finite element simulation of the SECM image was performed to assess quantitatively the spatial resolution limited by the tip diameter in resolving two adjacent pores and to determine the actual size of a nanopore, which was approximated as an elliptical cylinder with a depth of 30 nm and major and minor axes of 53 and 41 nm, respectively. These structural parameters were consistent with those determined by transmission electron microscopy, thereby confirming the reliability of quantitative SECM imaging at the nanoscale level.
Journal of the American Chemical Society | 2013
Jiyeon Kim; Anahita Izadyar; Nikoloz Nioradze; Shigeru Amemiya
The nuclear pore complex (NPC) is the proteinaceous nanopore that solely mediates molecular transport across the nuclear envelope between the nucleus and cytoplasm of a eukaryotic cell. Small molecules (<40 kDa) diffuse through the large pore of this multiprotein complex. A passively impermeable macromolecule tagged with a signal peptide is chaperoned through the nanopore by nuclear transport receptors (e.g., importins) owing to their interactions with barrier-forming proteins. Presently, this bimodal transport mechanism is not well understood and is described by controversial models. Herein, we report on a dynamic and spatially resolved mechanism for NPC-mediated molecular transport through nanoscale central and peripheral routes with distinct permeabilities. Specifically, we develop a nanogap-based approach of scanning electrochemical microscopy to precisely measure the extremely high permeability of the nuclear envelope to a small probe molecule, (ferrocenylmethyl)trimethylammonium. Effective medium theories indicate that the passive permeability of 5.9 × 10(-2) cm/s corresponds to the free diffusion of the probe molecule through ~22 nanopores with a radius of 24 nm and a length of 35 nm. Peripheral routes are blocked by wheat germ agglutinin to yield 2-fold lower permeability for 17 nm-radius central routes. This lectin is also used in fluorescence assays to find that importins facilitate the transport of signal-tagged albumin mainly through the 7 nm-thick peripheral route rather than through the sufficiently large central route. We propose that this spatial selectivity is regulated by the conformational changes in barrier-forming proteins that transiently and locally expand the impermeably thin peripheral route while blocking the central route.
Analytical Chemistry | 2010
Yixian Wang; Jeyavel Velmurugan; Michael V. Mirkin; Patrick J. Rodgers; Jiyeon Kim; Shigeru Amemiya
Steady-state voltammetry at the pipet-supported liquid/liquid interface has previously been used to measure kinetics of simple and facilitated ion transfer (IT) processes. Recently, we showed that the conventional experimental protocol and data analysis produce large uncertainties in kinetic parameters of rapid IT processes extracted from pipet voltammograms. Here, we used a new mode of nanopipet voltammetry, in which a transferable ion is initially present as a common ion in both liquid phases, and improved methodology for silanization of the outer pipet wall to investigate the kinetics of the rapid transfer of tetraethylammonium (TEA(+)) at the 1,2-dichloroethane/water interface. This reaction was often employed as a model system to check the IT theory. The determined standard rate constant and transfer coefficient of the TEA(+) transfer are compared with previously reported values to demonstrate limitations of conventional nanopipet voltammetry with a transferrable ion present only in one liquid phase.
Analytical Chemistry | 2011
Nikoloz Nioradze; Jiyeon Kim; Shigeru Amemiya
We report on a novel theory and experiment for scanning electrochemical microscopy (SECM) to enable quasi-steady-state voltammetry of rapid electron transfer (ET) reactions at macroscopic substrates. With this powerful approach, the substrate potential is cycled widely across the formal potential of a redox couple while the reactant or product of a substrate reaction is amperometrically detected at the tip in the feedback or substrate generation/tip collection mode, respectively. The plot of tip current versus substrate potential features the retraceable sigmoidal shape of a quasi-steady-state voltammogram although a transient voltammogram is obtained at the macroscopic substrate. Finite element simulations reveal that a short tip-substrate distance and a reversible substrate reaction (except under the tip) are required for quasi-steady-state voltammetry. Advantageously, a pair of quasi-steady-state voltammograms is obtained by employing both operation modes to reliably determine all transport, thermodynamic, and kinetic parameters as confirmed experimentally for rapid ET reactions of ferrocenemethanol and 7,7,8,8-tetracyanoquinodimethane at a Pt substrate with ∼0.5 μm-radius Pt tips positioned at 90 nm-1 μm distances. Standard ET rate constants of ∼7 cm/s were obtained for the latter mediator as the largest determined for a substrate reaction by SECM. Various potential applications of quasi-steady-state voltammetry are also proposed.
Electroanalysis | 1998
Philippe Bühlmann; Hiroshi Aoki; Kang Ping Xiao; Shigeru Amemiya; Koji Tohda; Yoshio Umezawa
Selective binding of electroinactive analytes to electrodes that are chemically modified with receptors can be used to control heterogeneous redox reactions of electroactive species. The latter are in this context often called markers because their use allows the indirect determination of the electroinactive analytes with the inherent possibility for chemical signal amplification. Two different approaches can be distinguished. To structurally mimic natural ion-channel proteins, electrodes are modified with artificial receptors having intramolecular channels that can be blocked by formation of inclusion complexes with the analyte. In more abstract analogy to the working principle of ion-channel proteins, binding of usually charged analytes to receptors without intramolecular channels is used to control redox reactions of the marker species on the basis of electrostatic interactions, and, occasionally, of steric repulsion. The versatility and general characteristics of this type of chemically gated sensors are discussed, and specific examples from recent studies are presented.