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Dive into the research topics where Shin-ichiro Sumi is active.

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Featured researches published by Shin-ichiro Sumi.


Plant Journal | 2015

Identification of a flavin-containing S-oxygenating monooxygenase involved in alliin biosynthesis in garlic.

Naoko Yoshimoto; Misato Onuma; Shinya Mizuno; Yuka Sugino; Ryo Nakabayashi; Shinsuke Imai; Tadamitsu Tsuneyoshi; Shin-ichiro Sumi; Kazuki Saito

S-Alk(en)yl-l-cysteine sulfoxides are cysteine-derived secondary metabolites highly accumulated in the genus Allium. Despite pharmaceutical importance, the enzymes that contribute to the biosynthesis of S-alk-(en)yl-l-cysteine sulfoxides in Allium plants remain largely unknown. Here, we report the identification of a flavin-containing monooxygenase, AsFMO1, in garlic (Allium sativum), which is responsible for the S-oxygenation reaction in the biosynthesis of S-allyl-l-cysteine sulfoxide (alliin). Recombinant AsFMO1 protein catalyzed the stereoselective S-oxygenation of S-allyl-l-cysteine to nearly exclusively yield (RC SS )-S-allylcysteine sulfoxide, which has identical stereochemistry to the major natural form of alliin in garlic. The S-oxygenation reaction catalyzed by AsFMO1 was dependent on the presence of nicotinamide adenine dinucleotide phosphate (NADPH) and flavin adenine dinucleotide (FAD), consistent with other known flavin-containing monooxygenases. AsFMO1 preferred S-allyl-l-cysteine to γ-glutamyl-S-allyl-l-cysteine as the S-oxygenation substrate, suggesting that in garlic, the S-oxygenation of alliin biosynthetic intermediates primarily occurs after deglutamylation. The transient expression of green fluorescent protein (GFP) fusion proteins indicated that AsFMO1 is localized in the cytosol. AsFMO1 mRNA was accumulated in storage leaves of pre-emergent nearly sprouting bulbs, and in various tissues of sprouted bulbs with green foliage leaves. Taken together, our results suggest that AsFMO1 functions as an S-allyl-l-cysteine S-oxygenase, and contributes to the production of alliin both through the conversion of stored γ-glutamyl-S-allyl-l-cysteine to alliin in storage leaves during sprouting and through the de novo biosynthesis of alliin in green foliage leaves.


Frontiers in Plant Science | 2015

Garlic γ-glutamyl transpeptidases that catalyze deglutamylation of biosynthetic intermediate of alliin

Naoko Yoshimoto; Ayami Yabe; Yuka Sugino; Soichiro Murakami; Niti Sai-ngam; Shin-ichiro Sumi; Tadamitsu Tsuneyoshi; Kazuki Saito

S-Alk(en)yl-L-cysteine sulfoxides are pharmaceutically important secondary metabolites produced by plants that belong to the genus Allium. Biosynthesis of S-alk(en)yl-L-cysteine sulfoxides is initiated by S-alk(en)ylation of glutathione, which is followed by the removal of glycyl and γ-glutamyl groups and S-oxygenation. However, most of the enzymes involved in the biosynthesis of S-alk(en)yl-L-cysteine sulfoxides in Allium plants have not been identified. In this study, we identified three genes, AsGGT1, AsGGT2, and AsGGT3, from garlic (Allium sativum) that encode γ-glutamyl transpeptidases (GGTs) catalyzing the removal of the γ-glutamyl moiety from a putative biosynthetic intermediate of S-allyl-L-cysteine sulfoxide (alliin). The recombinant proteins of AsGGT1, AsGGT2, and AsGGT3 exhibited considerable deglutamylation activity toward a putative alliin biosynthetic intermediate, γ-glutamyl-S-allyl-L-cysteine, whereas these proteins showed very low deglutamylation activity toward another possible alliin biosynthetic intermediate, γ-glutamyl-S-allyl-L-cysteine sulfoxide. The deglutamylation activities of AsGGT1, AsGGT2, and AsGGT3 toward γ-glutamyl-S-allyl-L-cysteine were elevated in the presence of the dipeptide glycylglycine as a γ-glutamyl acceptor substrate, although these proteins can act as hydrolases in the absence of a proper acceptor substrate, except water. The apparent Km values of AsGGT1, AsGGT2, and AsGGT3 for γ-glutamyl-S-allyl-L-cysteine were 86 μM, 1.1 mM, and 9.4 mM, respectively. Subcellular distribution of GFP-fusion proteins transiently expressed in onion cells suggested that AsGGT2 localizes in the vacuole, whereas AsGGT1 and AsGGT3 possess no apparent transit peptide for localization to intracellular organelles. The different kinetic properties and subcellular localizations of AsGGT1, AsGGT2, and AsGGT3 suggest that these three GGTs may contribute differently to the biosynthesis of alliin in garlic.


International Congress Series | 2002

Antioxidants in processed garlic: II. Tetrahydro-β-carboline derivatives identified in aged garlic extract

Nagatoshi Ide; Makoto Ichikawa; Kenjiro Ryu; Kozue Ogasawara; Jiro Yoshida; Susumu Yoshida; Takashi Sasaoka; Shin-ichiro Sumi; Hiromichi Sumiyoshi

Abstract The antioxidant effects and the changes in concentrations of tetrahydro-β-carboline derivatives (THβCs) identified in aged garlic extract (AGE) were determined using several in vitro assay systems and liquid chromatography mass spectrometry (LC-MS). Our data indicate that THβCs are also potent antioxidants, which increase during the natural aging process of garlic and, thus, may contribute to the biological activities of processed garlic such as AGE.


International Congress Series | 2002

Antioxidants in processed garlic: I. Fructosyl arginine identified in aged garlic extract

Nagatoshi Ide; Kenjiro Ryu; Kozue Ogasawara; Takashi Sasaoka; Hiromichi Matsuura; Shin-ichiro Sumi; Hiromichi Sumiyoshi; Benjamin H. S. Lau

Abstract Both fresh and processed garlic ( Allium sativum L.) have shown a variety of biological activities including antioxidant, cancer prevention, liver protection, immunomodulation and reduction of cardiovascular disease risk factors. In the present study, the antioxidant effects and the change in concentration of fructosyl arginine (Fru-Arg) identified in aged garlic extract (AGE) were determined using several in vitro assay systems and high-performance liquid chromatography (HPLC). Our data indicate that Fru-Arg is a potent antioxidant, which forms and increases during the natural aging process and, thus, may contribute to the biological activities of processed garlic.


Journal of General Virology | 1993

Novel rod-shaped viruses isolated from garlic, Allium sativum, possessing a unique genome organization.

Shin-ichiro Sumi; Tadamitsu Tsuneyoshi; Hiroaki Furutani


Biofactors | 2002

Antioxidant effects of tetrahydro-β-carboline derivatives identified in aged garlic extract

Makoto Ichikawa; Kenjiro Ryu; Jiro Yoshida; Nagatoshi Ide; Susumu Yoshida; Takashi Sasaoka; Shin-ichiro Sumi


Archive | 2003

Garlic Chemistry: Chemical and Biological Properties of Sulfur-Containing Compounds Derived from Garlic

Yukihiro Kodera; Hiromichi Matsuura; Hiromichi Sumiyoshi; Shin-ichiro Sumi


Journal of The Japanese Society for Horticultural Science | 2002

Garlic-like but odorless plant Allium ampeloprasum 'Mushuu-ninniku'

Toyohiko Ariga; Hitomi Kumagai; Masakiyo Yoshikawa; Hajime Kawakami; Taiichiro Seki; Hidetoshi Sakurai; Isao Hasegawa; Takeomi Etoh; Hiromichi Sumiyoshi; Tadamitsu Tsuneyoshi; Shin-ichiro Sumi; Kazuo Iwai


Plant Biotechnology | 2001

Development and Establishment of Practical Tissue Culture Methods for Production of Virus-Free Garlic Seed Bulbs, a Novel Field Cultivation System and Convenient Methods for Detecting Garlic Infecting Viruses

Shin-ichiro Sumi; Tadamitsu Tsuneyoshi; Ayumi Suzuki; Masanori Ayabe


Archive | 2003

Antioxidants in Processed Garlic: Tetrahydro-β-carboline Derivatives in Aged Garlic Extract

Nagatoshi Ide; Makoto Ichikawa; Kenjiro Ryu; Jiro Yoshida; Takashi Sasaoka; Shin-ichiro Sumi; Hiromichi Sumiyoshi

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Kazuo Iwai

Kobe Women's University

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