Shinichi Taoka
University of Nebraska–Lincoln
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Publication
Featured researches published by Shinichi Taoka.
Journal of Inorganic Biochemistry | 2001
Shinichi Taoka; Ruma Banerjee
Homocysteine is a key junction metabolite that can be converted to cystathionine in a reaction catalyzed by the heme and pyridoxal phosphate-dependent cystathionine beta-synthase. The heme has unusual spectroscopic properties and the axial ligands have been assigned as histidine and cysteine, respectively. Its role in the protein is not obvious from the chemistry of the beta-replacement reaction that is catalyzed. We have characterized the binding of the gaseous signaling molecule, NO, to cystathionine beta-synthase and examined its effect on the reactions catalyzed by the truncated dimeric form of the enzyme, W409X, which is a natural variant. Binding of NO appears to result in the formation of a five-coordinate ferrous nitrosyl species in which both endogenous ligands have been lost. This is in contrast to CO binding which is reported to displace the thiolate ligand and form a six-coordinate species. NO binds to the full-length enzyme with a K(d) of 281+/-50 microM and to the truncated enzyme with a K(d) of 350+/-44 microM. Binding of NO to the full-length enzyme inhibits activity with a K(i) of 320+/-60 microM. These studies demonstrate that as with CO, perturbation of the heme environment by NO is communicated to the active site with concomitant inhibition of enzyme activity, and suggests a regulatory role for heme in cystathionine beta-synthase.
Journal of Biological Chemistry | 2006
Mrinalini Puranik; Colin L. Weeks; Dorothée Lahaye; Omer Kabil; Shinichi Taoka; Steen Brøndsted Nielsen; John T. Groves; Ruma Banerjee; Thomas G. Spiro
Cystathionine β-synthase (CBS) condenses homocysteine, a toxic metabolite, with serine in a pyridoxal phosphate-dependent reaction. It also contains a heme cofactor to which carbon monoxide (CO) or nitric oxide can bind, resulting in enzyme inhibition. To understand the mechanism of this regulation, we have investigated the equilibria and kinetics of CO binding to the highly active catalytic core of CBS, which is dimeric. CBS exhibits strong anticooperativity in CO binding with successive association constants of 0.24 and 0.02 μm-1. Stopped flow measurements reveal slow CO association (0.0166 s-1) limited by dissociation of the endogenous ligand, Cys-52. Rebinding of CO and of Cys-52 following CO photodissociation were independently monitored via time-resolved resonance Raman spectroscopy. The Cys-52 rebinding rate, 4000 s-1, is essentially unchanged between pH 7.6 and 10.5, indicating that the pKa of Cys-52 is shifted below pH 7.6. This effect is attributed to the nearby Arg-266 residue, which is proposed to form a salt bridge with the dissociated Cys-52, thereby inhibiting its protonation and slowing rebinding to the Fe. This salt bridge suggests a pathway for enzyme inactivation upon CO binding, because Arg-266 is located on a helix that connects the heme and pyridoxal phosphate cofactor domains.
Journal of Inorganic Biochemistry | 2001
Shinichi Taoka; Edward L. Green; Thomas M. Loehr; Ruma Banerjee
Cystathionine beta-synthase is a key heme and pyridoxal phosphate-dependent enzyme involved in homocysteine metabolism in humans. The role of the recently discovered heme in this protein remains an important open question. The axial ligands to the heme in both the ferrous and ferric states have been assigned as cysteine and histidine residues, respectively. In this study, we have examined the effect of ligation and spin state changes in the heme on the activity of the enzyme. Treatment of the ferric enzyme with HgCl2 results in the conversion of six-coordinate low-spin heme to five-coordinate high-spin heme and is paralleled by a loss of activity. In contrast, treatment of the ferrous enzyme with HgCl2 results in replacement of the cysteine ligand by an unidentified sixth ligand and retention of the six-coordinate state, and is also accompanied by loss of enzyme activity. Treatment of the five-coordinate HgCl2-treated enzyme with thiols, such as homocysteine, results in reversion to a six-coordinate state. Resonance Raman spectroscopy with 34S-labeled enzyme reveals the return of the endogenous thiol ligand under these conditions and rules out direct coordination by the thiolate of homocysteine to the heme.
Biochemistry | 2002
Shinichi Taoka; Bryan W. Lepore; Omer Kabil; Sunil Ojha; Dagmar Ringe; Ruma Banerjee
Journal of the American Chemical Society | 1995
Rugmini Padmakumar; Shinichi Taoka; Raghavaikamal Padmakumar; Ruma Banerjee
Journal of Biological Chemistry | 1994
Shinichi Taoka; Raghavakaimal Padmakumar; Ming-Tain Lai; Hung-Wen Liu; Ruma Banerjee
Biochemistry | 1995
Antonia M. Calafat; Shinichi Taoka; James M. Puckett; Craig Semerad; Hon Yan; Laibin Luo; Huilan Chen; Ruma Banerjee; Luigi G. Marzilli
Journal of Biological Chemistry | 2002
Shinichi Taoka; Ruma Banerjee
Journal of Biotechnology | 2007
Jayanta Sinha; Mehmet Inan; Sarah Fanders; Shinichi Taoka; Mark Gouthro; Todd Swanson; Rick Barent; Ardis Barthuli; Bonnie M. Loveless; Leonard A. Smith; Theresa J. Smith; Ian Henderson; John T. Ross; Michael M. Meagher
Bioelectromagnetics | 1997
Shinichi Taoka; Raghavakaimal Padmakumar; Charles B. Grissom; Ruma Banerjee
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United States Army Medical Research Institute of Infectious Diseases
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