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Dive into the research topics where Shirou Tsuchida is active.

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Featured researches published by Shirou Tsuchida.


Brain Research | 2010

Entacapone, a catechol-O-methyltransferase inhibitor, improves the motor activity and dopamine content of basal ganglia in a rat model of Parkinson's disease induced by Japanese encephalitis virus

Naoya Hamaue; Akihiko Ogata; Mutsuko Terado; Shirou Tsuchida; Ichiro Yabe; Hidenao Sasaki; Masahiko Hirafuji; Hiroko Togashi; Takashi Aoki

Levodopa is the main medication used for the treatment of Parkinsons disease. However, dyskinesia and wearing-off appear after the administration of high-dose levodopa for a long period. To combat the dyskinesia and wearing-off, levodopa is used together with a dopamine (DA) receptor agonist, and the amount of levodopa is decreased. We have reported the monoamine oxidase (MAO)-B inhibitor selegiline to be effective for treating motor dysfunction in Parkinsons disease model rats. We analyzed the improvement in motor functions and catecholamine contents in various brain regions induced by a combination of the catechol-O-methyltransferase (COMT) inhibitor entacapone and a levodopa/dopadecarboxylase inhibitor (DDCI) in Japanese encephalitis virus (JEV) induced Parkinsons disease model rats. Entacapone (10 mg/kg) was administered via a single oral administration with levodopa/DDCI (10 mg/kg). The motor functions of the JEV model rats were significantly worsened, compared with those of the healthy control rats. The motor functions in the Parkinsons disease model rats were significantly recovered to the same levels as the healthy control rats by the combined administration of entacapone and levodopa/DDCI. A significant improvement in motor function was not demonstrated in the case of the administration of levodopa/DDCI alone. The striatal DA concentrations in the model rat brains were significantly increased by using levodopa/DDCI together with entacapone. Motor function was recovered by raising the striatum DA density in the model rats. Thus, COMT inhibitors are useful for decreasing the amount of levodopa administered to Parkinsons disease patients.


Bioscience, Biotechnology, and Biochemistry | 2006

Fluorescence Resonance Energy Transfer-Based Assay for DNA-Binding Protein Tagged by Green Fluorescent Protein

Takashi Aoki; Tomoko Imamura; Hiroyuki Ozaki; Hideki Ideuchi; Shirou Tsuchida; Hiroyuki Watabe

Specific interaction between green fluorescent protein (GFP)-tagged human α- or γ-enolase97-242 (α or γENO97-242) and the rhodamine-labeled DNA fragment containing the c-myc P2 promoter was detected by a fluorescence resonance energy transfer (FRET)-based assay, designated as a “real-time FRET assay.” The approach of donor (GFP) and acceptor (rhodamine) was caused by the association between ENO97-242 and the c-myc P2 promoter, and the time-dependent increase in fluorescence intensity of the reaction mixture was observed at ex=400 nm and em=590 nm. The relative affinity (Ras) of ENO97-242 mutants to the wild type was investigated with a real-time FRET assay, and it was clarified that the amino acids that participated in the interaction existed comparatively broadly. Although it was difficult to measure the absolute value of the affinity for the binding protein by using this method, it was possible to investigate the relative affinity of mutants for the wild type. A real-time FRET assay using the GFP-tagged protein could be used as not only a qualitative, but also as a quantitative analysis, this being the best for investigating the key amino acids in binding proteins.


Biochemical and Biophysical Research Communications | 2014

Screening of recombinant Escherichia coli using activation of green fluorescent protein as an indicator.

Shirou Tsuchida; Mao Tamura; Naoya Hamaue; Takashi Aoki

A novel cloning vector that can be used to identify recombinant Escherichia coli colonies by activation of the green fluorescent protein gene (GFP) was constructed. Screening using the vector does not require special reagents. The recombinant plasmid activates GFP, and the rate of false-positive results is low.


FEBS Open Bio | 2018

Effect of sequential C‐terminal tryptophans on green fluorescent protein fluorescence

Shirou Tsuchida; Takumi Kanashiki; Shuhei Izumiya; Takuya Ichikawa; Ryusuke Kurosawa; Naoya Hamaue; Takashi Aoki

The effect of the addition of sequential C‐terminal tryptophan residues on the fluorescence intensity of GFP was investigated. Tandem repeats of six tryptophan residues markedly decreased fluorescence intensity. This phenomenon is likely to occur because of the inhibition of GFP folding, resulting in insolubility. Exploiting this phenomenon, we constructed a cloning vector that facilitates the identification of recombinant colonies of Escherichia coli by the activation of GFP.


Journal of Oleo Science | 2017

Synthesis and Detection by HPLC of 3-Oxohexadecanoyl-CoA for the Study of Peroxisomal Bifunctional Proteins

Shirou Tsuchida; Ayumu Tenma; Naoya Hamaue; Tsuyoshi Murai; Teruki Yoshimura; Takashi Aoki; Takao Kurosawa

3-oxohexadecanoyl-CoA was synthesized for the study of D-bifunctional protein (EC 4. 2. 1. 107, EC 4. 2. 1. 119, EC 1. 1. 1. n12) and L-bifunctional protein (EC 4. 2. 1. 17, EC 5. 3. 3. 8, EC 1. 1. 1. 35). First, tetradecanal was subjected to the Reformatsky reaction with ethyl bromoacetate, and the product was then converted into ethyl 3-oxohexadecanoate. After acetalization of the 3-oxo ester with ethylene glycol, 3,3-ethlenedioxyhexadecanoic acid was obtained by alkaline hydrolysis. The acid was condensed with coenzyme A (CoA) by the mixed anhydride method, and the resulting CoA ester was deprotected with 4 M HCl to obtain 3-oxohexadecanoyl-CoA. In addition, the behavior of the CoA ester under several conditions of high-performance liquid chromatography (HPLC) was also investigated. We established separation detection of (R)-3-hydroxyhexadecanoyl-CoA, (S)-3-hydroxyhexadecaboyl-CoA, 3-oxohexadecanoyl-CoA, and trans-2-hexadecenoyl-CoA.


Molecular genetics and metabolism reports | 2015

Effects of naturally occurring missense mutations and G525V in the hydratase domain of human d-bifunctional protein on hydratase activity

Shirou Tsuchida; Akihiro Osaka; Yuya Abe; Naoya Hamaue; Takashi Aoki

d-bifunctional protein (d-BP) deficiency is thought to lead to severe lipid metabolism disorders. To investigate the effect of naturally occurring missense mutations in the hydratase domain in d-BP, we constructed several d-BP hydratase variants and measured their activities. Missense mutations at sites whose conservation rates among 30 eukaryotes were < 70% did not affect hydratase activity. We predicted that missense mutations of highly conserved amino acids would markedly reduce activity. However, R562H and R562L, naturally occurring missense mutations of highly conserved amino acids, did not reduce activity. This result suggests that a missense mutation in a highly conserved amino acid does not always lead to severe lipid metabolism disorders. We also investigated the effect of G525V, which had been found in a mildly symptomatic patient with d-BP deficiency who was heterozygous for G525 and G658X. G525V markedly reduced hydratase activity. We had predicted that heterozygous G525V and G658X would lead to severely disordered lipid metabolism. However, the symptoms were inconsistent with this prediction. Characterizing mutations in the d-BP gene and the symptoms of d-BP deficiency may require pleiotropy, not only in vitro, studies.


Bioscience, Biotechnology, and Biochemistry | 2010

Application of "Homogeneous Assay for Fluorescence Concentrated on Membrane" to the Analysis of the Substrate Specificity of Protease

Shirou Tsuchida; Takashi Shigematsu; Taemi Yahara; Kana Nunome; Naoya Hamaue; Takashi Aoki

The utility of the homogeneous assay for fluorescence concentrated on membrane (HAFCOM) in the analysis of the substrate specificity of protease was investigated using tobacco etch virus (TEV) protease. The V max of TEV protease against variants of a substrate was obtained by a simple procedure. It was considered that HAFCOM was more accurate than other endpoint measurements of protease assay.


Journal of Oleo Science | 2011

Chiral Separation, Determination of Absolute Configuration, and High-performance Liquid Chromatography Detection of Enantiomeric 3-hydroxyhexadecanoyl-CoA

Shirou Tsuchida; Koutarou Kawamoto; Kana Nunome; Naoya Hamaue; Shu-Ping Hui; Tsuyoshi Murai; Takashi Aoki; Takao Kurosawa


Analytical Biochemistry | 2008

Novel assays for proteases using green fluorescent protein-tagged substrate immobilized on a membrane disk

Takashi Aoki; Shirou Tsuchida; Taemi Yahara; Naoya Hamaue


Journal of Oleo Science | 2011

Analysis of enoyl-coenzyme A hydratase activity and its stereospecificity using high-performance liquid chromatography equipped with chiral separation column.

Shirou Tsuchida; Koutarou Kawamoto; Kana Nunome; Naoya Hamaue; Teruki Yoshimura; Takashi Aoki; Takao Kurosawa

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Takashi Aoki

Health Sciences University of Hokkaido

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Naoya Hamaue

Health Sciences University of Hokkaido

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Kana Nunome

Health Sciences University of Hokkaido

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Koutarou Kawamoto

Health Sciences University of Hokkaido

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Taemi Yahara

Health Sciences University of Hokkaido

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Takao Kurosawa

Health Sciences University of Hokkaido

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Teruki Yoshimura

Health Sciences University of Hokkaido

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Tsuyoshi Murai

Health Sciences University of Hokkaido

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Akihiro Osaka

Health Sciences University of Hokkaido

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