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Dive into the research topics where Shogo Atsumi is active.

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Featured researches published by Shogo Atsumi.


FEBS Letters | 2002

Aminopeptidase N isoforms from the midgut of Bombyx mori and Plutella xylostella -- their classification and the factors that determine their binding specificity to Bacillus thuringiensis Cry1A toxin.

Kazuko Nakanishi; Katsuro Yaoi; Yasushi Nagino; Hirotaka Hara; Madoka Kitami; Shogo Atsumi; Nami Miura; Ryoichi Sato

Novel aminopeptidase N (APN) isoform cDNAs, BmAPN3 and PxAPN3, from the midguts of Bombyx mori and Plutella xylostella, respectively, were cloned, and a total of eight APN isoforms cloned from B. mori and P. xylostella were classified into four classes. Bacillus thuringiensis Cry1Aa and Cry1Ab toxins were found to bind to specific APN isoforms from the midguts of B. mori and P. xylostella, and binding occurred with fragments that corresponded to the BmAPN1 Cry1Aa toxin‐binding region of each APN isoform. The results suggest that APN isoforms have a common toxin‐binding region, and that the apparent specificity of Cry1Aa toxin binding to each intact APN isoform seen in SDS–PAGE is determined by factors such as expression level in conjunction with differences in binding affinity.


FEBS Letters | 2004

A carotenoid-binding protein (CBP) plays a crucial role in cocoon pigmentation of silkworm (Bombyx mori) larvae

Hiroko Tabunoki; Satoshi Higurashi; Osamu Ninagi; Hiroshi Fujii; Yutaka Banno; Masashi Nozaki; Mika Kitajima; Nami Miura; Shogo Atsumi; Kozo Tsuchida; Hideaki Maekawa; Ryoichi Sato

We examined the role of carotenoid‐binding protein (CBP) in yellow cocoon pigmentation. First, using yellow or white cocoon races, we investigated the linkage between the yellow pigmentation and CBP expression. CBP was expressed only in the silk gland of the yellow cocoon races, which utilize carotenoids for cocoon pigmentation. Furthermore, CBP expression in the silk glands of day 1–7 fifth instar larvae matched the period of carotenoid uptake into the silk gland. Finally, we gave double‐stranded CBP RNA to Bombyx mori (B. mori) larvae to induce RNA interference. The significantly reduced expression of CBP in the silk gland of fifth instar larva was confirmed on day 4 and a decrease in yellow pigmentation was observed in the cocoon. We showed that CBP plays a key role in the yellow cocoon pigmentation caused by carotenoids.


FEBS Letters | 2003

A cadherin-like protein functions as a receptor for Bacillus thuringiensis Cry1Aa and Cry1Ac toxins on midgut epithelial cells of Bombyx mori larvae

Hirotaka Hara; Shogo Atsumi; Katsuro Yaoi; Kazuko Nakanishi; Satoshi Higurashi; Nami Miura; Hiroko Tabunoki; Ryoichi Sato

Aminopeptidase N (APN) and cadherin‐like protein (BtR175) from Bombyx mori larvae were examined for their roles in Cry1Aa‐ and Cry1Ac‐induced lysis of B. mori midgut epithelial cells (MECs). APNs and BtR175 were present in all areas of the midgut, were particularly abundant in the posterior region, and were found only on columnar cell microvilli and not on the lateral membrane that makes cell–cell contacts. This distribution was in accordance with the distribution of Cry1A‐susceptible MECs in the midgut. The lytic activity of Cry1Aa and Cry1Ac on collagenase‐dissociated MECs was linearly dependent on toxin concentration. Although pre‐treatment of MECs with anti‐BtR175 antibody was observed to partially inhibit the lytic activity exerted by 0.1–1 nM Cry1Aa toxin or 5 nM Cry1Ac toxin, no significant inhibition was observed when MECs were pre‐treated with anti‐APN antibody. These results suggest that BtR175 functions as a major receptor for Cry1A toxins in the midgut of B. mori larvae.


Applied and Environmental Microbiology | 2005

Location of the Bombyx mori Aminopeptidase N Type 1 Binding Site on Bacillus thuringiensis Cry1Aa Toxin

Shogo Atsumi; Eri Mizuno; Hirotaka Hara; Kazuko Nakanishi; Madoka Kitami; Nami Miura; Hiroko Tabunoki; Ayako Watanabe; Ryoichi Sato

ABSTRACT We analyzed the binding site on Cry1Aa toxin for the Cry1Aa receptor in Bombyx mori, 115-kDa aminopeptidase N type 1 (BmAPN1) (K. Nakanishi, K. Yaoi, Y. Nagino, H. Hara, M. Kitami, S. Atsumi, N. Miura, and R. Sato, FEBS Lett. 519:215-220, 2002), by using monoclonal antibodies (MAbs) that block binding between the binding site and the receptor. First, we produced a series of MAbs against Cry1Aa and obtained two MAbs, MAbs 2C2 and 1B10, that were capable of blocking the binding between Cry1Aa and BmAPN1 (blocking MAbs). The epitope of the Fab fragments of MAb 2C2 overlapped the BmAPN1 binding site, whereas the epitope of the Fab fragments of MAb 1B10 did not overlap but was located close to the binding site. Using three approaches for epitope mapping, we identified two candidate epitopes for the blocking MAbs on Cry1Aa. We constructed two Cry1Aa toxin mutants by substituting a cysteine on the toxin surface at each of the two candidate epitopes, and the small blocking molecule N-(9-acridinyl)maleimide (NAM) was introduced at each cysteine substitution to determine the true epitope. The Cry1Aa mutant with NAM bound to Cys582 did not bind either of the two blocking MAbs, suggesting that the true epitope for each of the blocking MAbs was located at the site containing Val582, which also consisted of 508STLRVN513 and 582VFTLSAHV589. These results indicated that the BmAPN1 binding site overlapped part of the region blocked by MAb 2C2 that was close to but excluded the actual epitope of MAb 2C2 on domain III of Cry1Aa toxin. We also discuss another area on Cry1Aa toxin as a new candidate site for BmAPN1 binding.


The Journal of Comparative Neurology | 2005

Expression and localization of three G protein α subunits, Go, Gq, and Gs, in adult antennae of the silkmoth (Bombyx mori)

Nami Miura; Shogo Atsumi; Hiroko Tabunoki; Ryoichi Sato

In insect olfactory receptor neurons, rapid and transient increases in inositol triphosphate (IP3) and Ca2+ are detected upon stimulation with pheromone or nonpheromonal odorants. This suggests that heterotrimeric guanine nucleotide binding proteins (G proteins) may transduce some odorant responses in insects. We obtained cDNA clones encoding three classes of G protein α subunits, Bm Go, Bm Gq, and Bm Gs, from the antennae of the adult male silkmoth (Bombyx mori). RT‐PCR experiments showed that the mRNA of these G protein α subunits was also present in the various tissues of adult and larval insects. We used immunocytochemistry to localize these G protein α subunits in adult male and female antennae. In the adult male antennae, anti‐Go antiserum stained the nerve bundles. In contrast, anti‐Gq and anti‐Gs antisera stained the inner and outer dendritic segments of the putative olfactory receptor neuron. The localizations of Bm Go, Bm Gq, and Bm Gs in the female antennae were the same as in the male antennae. The localizations of Bm Gq and Bm Gs suggest that each subunit mediates a subset of the odorant response. J. Comp. Neurol. 485:143–152, 2005.


FEBS Journal | 2009

Analysis of the region for receptor binding and triggering of oligomerization on Bacillus thuringiensis Cry1Aa toxin

Fumiaki Obata; Madoka Kitami; Yukino Inoue; Shogo Atsumi; Yasutaka Yoshizawa; Ryoichi Sato

The determination of the receptor‐binding region of Cry toxins produced by Bacillus thuringiensis is expected to facilitate an improvement in their insecticidal ability through protein engineering. We analyzed the region on Cry1Aa molecules involved in interactions with the cadherin‐like protein receptor BtR175 using cysteine‐substituted mutant toxins and several synthetic peptides corresponding to the loops in domain 2. In addition, the region necessary to trigger oligomerization was analyzed using these mutant toxins. The mutant toxins were modified by two types of molecule, i.e. digested fragments of the Cry1Aa precursor with an average molecular mass of 2 kDa and 5‐iodoacetamidofluorescein, which has a molecular mass of 515 kDa. We examined whether these modifications interfere with the toxin–BtR175 interaction as a result of steric hindrance. 5‐Iodoacetamidofluorescein modification of R311C, N376C and G442C revealed steric hindrance effects, indicating that R311 on loop 1, N376 on loop 2 and G442 on loop 3 are on the contact face of the toxin–BtR175 interface when Cry1Aa binds to BtR175. Loop 2 is thought to interact with BtR175 directly, as a peptide corresponding to the N‐terminal half of loop 2, (365)LYRRIILG(372), has the potential to bind to BtR175 fragments. Meanwhile, mutant toxins with cysteine substitutions in loops 1 and 2 were oligomerized by the binding of digested fragments in the activation process without receptor interaction, and the wild‐type toxin formed oligomers by interaction with BtR175 fragments. These observations suggest that loops 1 and 2 form both a binding region and a sensor region, which triggers toxin oligomer formation.


FEBS Journal | 2008

Location of the Bombyx mori 175 kDa cadherin-like protein-binding site on Bacillus thuringiensis Cry1Aa toxin

Shogo Atsumi; Yukino Inoue; Takahisa Ishizaka; Eri Mizuno; Yasutaka Yoshizawa; Madoka Kitami; Ryoichi Sato

To identify and gain a better understanding of the cadherin‐like receptor‐binding site on Bacillus thuringiensis Cry toxins, it is advantageous to use Cry1Aa toxin, because its 3D structure is known. Therefore, Cry1Aa toxin was used to examine the locations of cadherin‐like protein‐binding sites. Initial experiments examining the binding compatibility for Cry1Aa toxin of partial fragments of recombinant proteins of a 175 kDa cadherin‐like protein from Bombyx mori (BtR175) and another putative receptor for Cry1Aa toxin, aminopeptidase N1, from Bo. mori (BmAPN1), suggested that their binding sites are close to each other. Of the seven mAbs against Cry1Aa toxin, two mAbs were selected that block the binding site for BtR175 on Cry1Aa toxin: 2A11 and 2F9. Immunoblotting and alignment analyses of four Cry toxins revealed amino acids that included the epitope of mAb 2A11, and suggested that the area on Cry1Aa toxin blocked by the binding of mAb 2A11 is located in the region consisting of loops 2 and 3. Two Cry1Aa toxin mutants were constructed by substituting a Cys on the area blocked by the binding of mAb 2A11, and the small blocking molecule, N‐(9‐acridinyl)maleimide, was introduced at each Cys substitution to determine the BtR175‐binding site. Substitution of Tyr445 for Cys had a crippling effect on binding of Cry1Aa toxin to BtR175, suggesting that Tyr445 may be in or close to the BtR175‐binding site. Monoclonal antibodies that blocked the binding site for BtR175 on Cry1Aa toxin inhibited the toxicity of Cry1Aa toxin against Bo. mori, indicating that binding of Cry1Aa toxin to BtR175 is essential for the action of Cry1Aa toxin on the insect.


Developmental and Comparative Immunology | 2004

Purification and cDNA cloning of a novel antibacterial peptide with a cysteine-stabilized αβ motif from the longicorn beetle, Acalolepta luxuriosa

Ayaka Saito; Kenjiro Ueda; Morikazu Imamura; Nami Miura; Shogo Atsumi; Hiroko Tabunoki; Ryoichi Sato

An antibacterial peptide from the hemolymph of a coleopteran insect, Acalolepta luxuriosa, in the superfamily Cerambyocidea was characterized. The mature antibacterial peptide had 27 amino acid residues with a theoretical molecular weight of 3099.29 and it showed antibacterial activity against Escherichia coli and Micrococcus luteus. The deduced amino acid sequence of the peptide showed that it had a cysteine-stabilized αβ motif with a C⋯CXXXC⋯C⋯CXC consensus sequence, like insect defensins. However, the results of a multiple sequence alignment and phylogenetic analysis with CLUSTAL X indicated that this peptide is a novel peptide with a cysteine-stabilized αβ motif that is distant from insect defensins.


Bioscience, Biotechnology, and Biochemistry | 2011

Bacillus thuringiensis Cry Toxins Bound Specifically to Various Proteins via Domain III, Which Had a Galactose-Binding Domain-Like Fold

Madoka Kitami; Tomoyuki Kadotani; Kazuko Nakanishi; Shogo Atsumi; Satoshi Higurashi; Takahisa Ishizaka; Ayako Watanabe; Ryoichi Sato

Cry toxins have been reported to bind not only to receptors on insect cells but also to several unrelated proteins. In this study, we investigated the binding properties of Bacillus thuringiensis Cry toxins, focusing on domain III, a Cry toxin region with a structure that of the galactose-binding domain-like. Cry1Aa, Cry1Ac, and Cry8Ca specifically bound to several proteins unrelated to insect midgut cells. Cry1Aa binding to Cry toxin-binding proteins was inhibited by a monoclonal antibody, 2C2, indicating that Cry1Aa binds to these Cry toxin-binding proteins through domain III. Cry1Aa binding to Bombyx mori aminopeptidase N and other Cry toxin-binding proteins was inhibited by carbonic anhydrase, a Cry toxin-binding protein. The binding regions of carbonic anhydrase and Bombyx mori aminopeptidase N were narrowed to regions of less than 20 amino acids that did not have any similarity, suggesting that Cry toxin domain III has a binding pocket for multiple proteins.


Comparative Biochemistry and Physiology B | 2005

Purification and cDNA cloning of a cecropin from the longicorn beetle, Acalolepta luxuriosa

Ayaka Saito; Kenjiro Ueda; Morikazu Imamura; Shogo Atsumi; Hiroko Tabunoki; Nami Miura; Ayako Watanabe; Madoka Kitami; Ryoichi Sato

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Ryoichi Sato

Tokyo University of Agriculture and Technology

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Nami Miura

Tokyo University of Agriculture and Technology

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Hiroko Tabunoki

Tokyo University of Agriculture and Technology

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Madoka Kitami

Tokyo University of Agriculture and Technology

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Ayako Watanabe

Tokyo University of Agriculture and Technology

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Ayaka Saito

Tokyo University of Agriculture and Technology

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Kazuko Nakanishi

Tokyo University of Agriculture and Technology

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Kenjiro Ueda

Tokyo University of Agriculture and Technology

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Morikazu Imamura

Tokyo University of Agriculture and Technology

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Hirotaka Hara

Tokyo University of Agriculture and Technology

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