Shruti Khanna

Detection of salt marsh vegetation stress and recovery after the Deepwater Horizon Oil Spill in Barataria Bay, Gulf of Mexico using AVIRIS data

The British Petroleum Deepwater Horizon Oil Spill in the Gulf of Mexico was the biggest oil spill in US history. To assess the impact of the oil spill on the saltmarsh plant community, we examined Advanced Visible Infrared Imaging Spectrometer (AVIRIS) data flown over Barataria Bay, Louisiana in September 2010 and August 2011. Oil contamination was mapped using oil absorption features in pixel spectra and used to examine impact of oil along the oiled shorelines. Results showed that vegetation stress was restricted to the tidal zone extending 14 m inland from the shoreline in September 2010. Four indexes of plant stress and three indexes of canopy water content all consistently showed that stress was highest in pixels next to the shoreline and decreased with increasing distance from the shoreline. Index values along the oiled shoreline were significantly lower than those along the oil-free shoreline. Regression of index values with respect to distance from oil showed that in 2011, index values were no longer correlated with proximity to oil suggesting that the marsh was on its way to recovery. Change detection between the two dates showed that areas denuded of vegetation after the oil impact experienced varying degrees of re-vegetation in the following year. This recovery was poorest in the first three pixels adjacent to the shoreline. This study illustrates the usefulness of high spatial resolution airborne imaging spectroscopy to map actual locations where oil from the spill reached the shore and then to assess its impacts on the plant community. We demonstrate that post-oiling trends in terms of plant health and mortality could be detected and monitored, including recovery of these saltmarsh meadows one year after the oil spill.

Use of Hyperspectral Remote Sensing to Evaluate Efficacy of Aquatic Plant Management

Abstract Invasive aquatic weeds negatively affect biodiversity, fluvial dynamics, water quality, and water storage and conveyance for a variety of human resource demands. In Californias Sacramento–San Joaquin River Delta, one submersed species—Brazilian egeria—and one floating species—waterhyacinth—are actively managed to maintain navigable waterways. We monitored the spatial and temporal dynamics of these species and their communities in the Sacramento-San Joaquin River Delta using airborne hyperspectral data and assessed the effect of herbicide treatments used to manage these species from 2003 to 2007. Each year, submersed aquatic plant species occupied about 12% of the surface area of the Delta in early summer and floating invasive plant species occupied 2 to 3%. Since 2003, the coverage of submersed aquatic plants expanded about 500 ha, whereas the coverage of waterhyacinth was reduced. Although local treatments have reduced the coverage of submersed aquatic plants, Delta-wide cover has not been significantly reduced. Locally, multiyear treatments could decrease submersed aquatic plants spread, given that no residual plants outside the treated area were present. In contrast, the spread of waterhyacinth either has been constant or has decreased over time. These results show that (1) the objectives of the Egeria densa Control Program (EDCP) have been hindered until 2007 by restrictions imposed on the timing of herbicide applications; (2) submersed aquatic plants appeared to function as ecosystem engineers by enabling spread to adjacent areas typically subject to scouring action; (3) repeated herbicide treatment of waterhyacinth has resulted in control of the spread of this species, which also appears to have facilitated the spread of waterprimrose and floating pennywort. These results suggest that management of the Delta aquatic macrophytes may benefit by an ecosystem-level implementation of an Integrated Delta Vegetation Management and Monitoring Program, rather than targeting only two problematic species. Nomenclature: Brazilian egeria, Egeria densa Planch.; floating pennywort, Hydrocotyle ranunculoides L. f.; waterhyacinth, Eichhornia crassipes (Mart.) Solms.; waterprimrose, Ludwigia L. spp.

An integrated approach to a biophysiologically based classification of floating aquatic macrophytes

Globally, invasive species are identified as one of the most serious threats to ecological stability and biodiversity. Water hyacinth (Eichhornia crassipes), an aggressive invasive aquatic species, has caused severe economic and ecological impacts in the Sacramento-San Joaquin River Delta in California. In the Delta, water hyacinth co-occurs with native pennywort (Hydrocotyle umbellata L.) and non-native water primrose (Ludwigia spp.). All of the species express a wide range of phenotypic variability, making it difficult to map them with remote sensing techniques because their spectral response is highly variable. We present an integrated approach to mapping these floating species using a sequence of hyperspectral methods, such as spectral angle mapper (SAM), linear spectral unmixing (LSU), continuum removal and several indices in a decision tree format. The ensuing tree, based on biophysiological differences between the species, was robust and consistent across three separate years and over multiple flightlines each year, spread across an area of approximately 2500 km2. The most important inputs used to create the tree were reflectance in the short-wave infrared (SWIR), Red Edge Index, near-infrared (NIR) reflectance, LSU fractions and SAM rule values. The floating species were mapped with average accuracy of 88% for water hyacinth, 87% for pennywort and 71% for water primrose.

Image spectroscopy and stable isotopes elucidate functional dissimilarity between native and nonnative plant species in the aquatic environment

• Nonnative species may change ecosystem functionality at the expense of native species. Here, we examine the similarity of functional traits of native and nonnative submersed aquatic plants (SAP) in an aquatic ecosystem. • We used field and airborne imaging spectroscopy and isotope ratios of SAP species in the Sacramento-San Joaquin Delta, California (USA) to assess species identification, chlorophyll (Chl) concentration, and differences in photosynthetic efficiency. • Spectral separability between species occurs primarily in the visible and near-infrared spectral regions, which is associated with morphological and physiological differences. Nonnatives had significantly higher Chl, carotene, and anthocyanin concentrations than natives and had significantly higher photochemical reflectance index (PRI) and δ(13) C values. • Results show nonnative SAPs are functionally dissimilar to native SAPs, having wider leaf blades and greater leaf area, dense and evenly distributed vertical canopies, and higher pigment concentrations. Results suggest that nonnatives also use a facultative C(4) -like photosynthetic pathway, allowing efficient photosynthesis in high-light and low-light environments. Differences in plant functionality indicate that nonnative SAPs have a competitive advantage over native SAPs as a result of growth form and greater light-use efficiency that promotes growth under different light conditions, traits affecting system-wide species distributions and community composition.

Marsh Loss Due to Cumulative Impacts of Hurricane Isaac and the Deepwater Horizon Oil Spill in Louisiana

Coastal ecosystems are greatly endangered due to anthropogenic development and climate change. Multiple disturbances may erode the ability of a system to recover from stress if there is little time between disturbance events. We evaluated the ability of the saltmarshes in Barataria Bay, Louisiana, USA, to recover from two successive disturbances, the DeepWater Horizon oil spill in 2010 and Hurricane Isaac in 2012. We measured recovery using vegetation indices and land cover change metrics. We found that after the hurricane, land loss along oiled shorelines was 17.8%, while along oil-free shorelines, it was 13.6% within the first 7 m. At a distance of 7–14 m, land loss from oiled regions was 11.6%, but only 6.3% in oil-free regions. We found no differences in vulnerability to land loss between narrow and wide shorelines; however, vegetation in narrow sites was significantly more stressed, potentially leading to future land loss. Treated oiled regions also lost more land due to the hurricane than untreated regions. These results suggest that ecosystem recovery after the two disturbances is compromised, as the observed high rates of land loss may prevent salt marsh from establishing in the same areas where it existed prior to the oil spill.

Comparing the Potential of Multispectral and Hyperspectral Data for Monitoring Oil Spill Impact

Oil spills from offshore drilling and coastal refineries often cause significant degradation of coastal environments. Early oil detection may prevent losses and speed up recovery if monitoring of the initial oil extent, oil impact, and recovery are in place. Satellite imagery data can provide a cost-effective alternative to expensive airborne imagery or labor intensive field campaigns for monitoring effects of oil spills on wetlands. However, these satellite data may be restricted in their ability to detect and map ecosystem recovery post-spill given their spectral measurement properties and temporal frequency. In this study, we assessed whether spatial and spectral resolution, and other sensor characteristics influence the ability to detect and map vegetation stress and mortality due to oil. We compared how well three satellite multispectral sensors: WorldView2, RapidEye and Landsat EMT+, match the ability of the airborne hyperspectral AVIRIS sensor to map oil-induced vegetation stress, recovery, and mortality after the DeepWater Horizon oil spill in the Gulf of Mexico in 2010. We found that finer spatial resolution (3.5 m) provided better delineation of the oil-impacted wetlands and better detection of vegetation stress along oiled shorelines in saltmarsh wetland ecosystems. As spatial resolution become coarser (3.5 m to 30 m) the ability to accurately detect and map stressed vegetation decreased. Spectral resolution did improve the detection and mapping of oil-impacted wetlands but less strongly than spatial resolution, suggesting that broad-band data may be sufficient to detect and map oil-impacted wetlands. AVIRIS narrow-band data performs better detecting vegetation stress, followed by WorldView2, RapidEye and then Landsat 15 m (pan sharpened) data. Higher quality sensor optics and higher signal-to-noise ratio (SNR) may also improve detection and mapping of oil-impacted wetlands; we found that resampled coarser resolution AVIRIS data with higher SNR performed better than either of the three satellite sensors. The ability to acquire imagery during certain times (midday, low tide, etc.) or a certain date (cloud-free, etc.) is also important in these tidal wetlands; WorldView2 imagery captured at high-tide detected a narrower band of shoreline affected by oil likely because some of the impacted wetland was below the tideline. These results suggest that while multispectral data may be sufficient for detecting the extent of oil-impacted wetlands, high spectral and spatial resolution, high-quality sensor characteristics, and the ability to control time of image acquisition may improve assessment and monitoring of vegetation stress and recovery post oil spills.

Identifying and classifying water hyacinth (Eichhornia crassipes) using the HyMap sensor

In recent years, the impact of aquatic invasive species on biodiversity has become a major global concern. In the Sacramento-San Joaquin Delta region in the Central Valley of California, USA, dense infestations of the invasive aquatic emergent weed, water hyacinth (Eichhornia crassipes) interfere with ecosystem functioning. This silent invader constantly encroaches into waterways, eventually making them unusable by people and uninhabitable to aquatic fauna. Quantifying and mapping invasive plant species in aquatic ecosystems is important for efficient management and implementation of mitigation measures. This paper evaluates the ability of hyperspectral imagery, acquired using the HyMap sensor, for mapping water hyacinth in the Sacramento-San Joaquin Delta region. Classification was performed on sixty-four flightlines acquired over the study site using a decision tree which incorporated Spectral Angle Mapper (SAM) algorithm, absorption feature parameters in the spectral region between 0.4 and 2.5μm, and spectral endmembers. The total image dataset was 130GB. Spectral signatures of other emergent aquatic species like pennywort (Hydrocotyle ranunculoides) and water primrose (Ludwigia peploides) showed close similarity with the water hyacinth spectrum, however, the decision tree successfully discriminated water hyacinth from other emergent aquatic vegetation species. The classification algorithm showed high accuracy (κ value = 0.8) in discriminating water hyacinth.

Mapping Wetlands Cover Types with Directional Polarization Signatures

We present an approach to mapping surface waters at local to global scales. In prior research we demonstrated that wide angle remotely sensed imagery having high radiance values measured near the direction of the sun glint in the principal plane signaled the presence of either open water or inundated plant communities, in contrast to dry upland plant communities. We demonstrated that regional to global scale wetlands issues that do not involve one meter resolution per se may be addressed with acceptable accuracy by applying spectral mixture analysis (SMA) and atmospheric correction techniques to the 6-10 km pixel imagery from POLDER. Here we investigate the influence of wind speed upon the discrimination process, showing that at very low wind speeds and very high wind speeds we are not able to discriminate the three cover types and that when wind speeds are moderate there is potentially an error associated with estimation of the areal extent of open water areas.