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Featured researches published by Siamak Bagheri.


European Journal of Phycology | 2016

Cyst-theca relationship and phylogenetic positions of Scrippsiella plana sp. nov. and S. spinifera (Peridiniales, Dinophyceae)

Zhaohe Luo; Kenneth Neil Mertens; Siamak Bagheri; Hilal Aydin; Yoshihito Takano; Kazumi Matsuoka; Francine M.G. McCarthy; Haifeng Gu

Abstract Species belonging to the dinophyte genus Scrippsiella are frequently reported in marine waters, but information on their distribution in brackish environments is limited. Here we describe a new species, S. plana, through incubation of non-calcified cysts from sediments collected in the South China Sea and Caspian Sea. The vegetative cells consist of a conical epitheca and a rounded hypotheca with the plate formula of Po, X, 4′, 3a, 7′′, 5C+t, 5S, 5′′′, 2′′′′. It differs from other Scrippsiella species by its flattened body in dorsoventral view and a small first anterior intercalary (1a) plate (half the size of plate 3a). Scrippsiella plana strains from the South China Sea and Caspian Sea share identical internal transcribed spacer (ITS) sequences, and show phenotypic plasticity and local adaptation in growth rate at various salinities, consistent with the environments in which they originated. In addition, two strains of S. spinifera were obtained by incubating ellipsoid cysts with calcareous spines from sediments collected along the Turkish and Hawaiian coast. They also share identical ITS sequences and differ from Duboscquodinium collinii (a parasite of tintinnids) only at two base pair positions (in the ITS2 region). Molecular phylogeny based on ITS and large subunit ribosomal DNA (LSU rDNA) sequences revealed that S. plana was nested within the Calciodinellum (CAL) clade and S. spinifera within the S. trochoidea (STR) clade. The phylogenetic position of ‘Peridinium’ wisconsinense is reported for the first time, which supports multiple transitions of the Peridiniales to freshwater.


Journal of Marine Biology | 2013

List of Zooplankton Taxa in the Caspian Sea Waters of Iran

Siamak Bagheri; Jalil Sabkara; Alireza Mirzajani; Seyed Hojat Khodaparast; Esmaeil Yosefzad; Foong Swee Yeok

A total of 61 zooplankton taxa were found in the southwestern Caspian Sea between 1996 and 2010. Thirteen of them were meroplankton taxa and forty-eight were holoplankton taxa. The occurrence of 14 freshwater taxa indicated the influence of the Anzali wetland and river inflows. The decrease in zooplankton taxa was detected since 1996-1997 and continued till 2010. Pleopis polyphemoides, the only one out of the nine recorded Cladocera species in 1996-1997, was found after 2001. Similarly, of the five Copepoda species recorded in 1996-1997, only one, Acartia tonsa, was found abundant during the 2001–2010 sampling period. It was striking that many species which were abundant in the Caspian Sea in 1996-1997 were not found after 2000. Many reasons could have contributed to the changes in the zooplankton composition of the southern Caspian Sea, notably the serious environmental degradation since the early 1990s. It is also possible that invasive species might play a role in wiping out some sensitive endemic species.


Journal of Eukaryotic Microbiology | 2017

Cyst-Theca Relationship and Phylogenetic Position of Impagidinium caspienense Incubated from Caspian Sea Surface Sediments: Relation to Gonyaulax baltica and Evidence for Heterospory within Gonyaulacoid Dinoflagellates

Kenneth Neil Mertens; Yoshihito Takano; Haifeng Gu; Siamak Bagheri; Vera Pospelova; Anna J. Pieńkowski; Suzanne A.G. Leroy; Kazumi Matsuoka

We investigate the cyst‐theca relationship of Impagidinium caspienense. Through an incubation experiment, we succeeded in examining the motile stage. Additional molecular analysis of single‐cyst PCR (LSU and SSU rDNA) reveal that the cyst is related to the species Gonyaulax baltica Ellegaard et al. ( ). The ability of this species to belong to two types of cyst‐based genera (spiniferate and impagidinioid) suggests that environmental (particularly salinity) and not genetic factors explain the formation of both morphotypes by G. baltica, which provides evidence for heterospory in this species. The affiliation to G. baltica demonstrates that I. caspienense is not endemic to the Caspian Sea. The phylogenetic position of several other gonyaulacoid species is also documented: Impagidinium pallidum, Ataxiodinium choane, Pyxidinopsis psilata, Spiniferites belerius, and Spiniferites ramosus. The LSU and SSU rDNA based phylogenies suggest that the genera Impagidinium and Spiniferites are not monophyletic, and that P. psilata and A. choane are close to Gonyaulax verior and Gonyaulax polygramma, respectively. In addition, this study accentuates the importance of cyst morphology in the classification of the Gonyaulacales.


Journal of the Marine Biological Association of the United Kingdom | 2016

Possible effect of Balanus improvisus on Cerastoderma glaucum distribution in the south-western Caspian Sea

Alireza Mirzajani; Amir Hossein Hamidian; Siamak Bagheri; Mahmoud Karami

We studied the communities of the invasive Balanus improvisus and native Cerastoderma glaucum populations in the south-western Caspian Sea. The massive movement of live Bivalvia attached to Cirripedia colonies along the studied coastline strengthens the hypotheses asserting the possible negative effects of exotic species on endemic species. Different live stages of both animals including meroplankton and macro-invertebrates were considered in the analysis. Bivalvia larvae showed a downward trend in population, in contrast with an upward trend of Cirripedia larvae from 1996 to 2013. The abundance of C. glaucum decreased west to east along the sea shore in contrast with increasing biomass of B. improvisus . Both Bivalvia and Cirripedia larvae did not show any overlapping temporal abundance. The Cirripedia larvae showed its highest abundance in winter while the bloom of Bivalvia larvae occurred in April and May during 2004–2013. The biomass of B. improvisus reported in this study was higher than those reported for the northern parts and for the middle parts. Distribution patterns of both species were described based on temperature, salinity gradient and local nutrient content. A non-linear growth model of Bivalvia showed the short-term effects of Cirripedia on Bivalvia growth. The controversy between the effects of Cirripedia on the movement of two different Cardiidae ( C. glaucum , which is affected by the presence of B. improvisus , and Adacna vitrea with no attached Cirripedia) highlights the contributing role of several other factors including ecosystem degradation.


Quaternary Science Reviews | 2012

Quantitative estimation of Holocene surface salinity variation in the Black Sea using dinoflagellate cyst process length

Kenneth Neil Mertens; Lee R. Bradley; Yoshihito Takano; Petra J. Mudie; Fabienne Marret; A.E. Aksu; Richard N. Hiscott; Thomas Verleye; Erik Askov Mousing; Ludmila L. Smyrnova; Siamak Bagheri; Mashhor Mansor; Vera Pospelova; Kazumi Matsuoka


American Journal of Applied Sciences | 2011

Fluctuations of Phytoplankton Community in the Coastal Waters of Caspian Sea in 2006

Siamak Bagheri; Mashhor Mansor; Marzieh Makaremi; Jalil Sabkara; W. O. Wan Maznah; Alireza Mirzajani; Seyed Hojat Khodaparast; Hossein Negarestan; Azemat Ghandi; Akbar Khalilpour


Journal of the Marine Biological Association of the United Kingdom | 2012

Temporal distribution of phytoplankton in the south­western Caspian Sea during 2009-2010: a comparison with previous surveys—ERRATUM

Siamak Bagheri; Mashhor Mansor; Muhammet Turkoglu; Marzieh Makaremi; Hadi Babaei


Ekoloji | 2012

Phytoplankton Species Composition and Abundance in the Southwestern Caspian Sea

Siamak Bagheri; Mashhor Mansor; Muhammet Turkoglu; Marzieh Makaremi; W. O. Wan Maznah; Wan Omar; Hossein Negarestan; Canakkale Onsekiz


Journal of the Marine Biological Association of the United Kingdom | 2014

Biodiversity, distribution and abundance of zooplankton in the Iranian waters of the Caspian Sea off Anzali during 1996–2010

Siamak Bagheri; Ulrich Niermann; Mashhor Mansor; Foong Swee Yeok


Turkish Journal of Fisheries and Aquatic Sciences | 2014

Phytoplankton and Nutrient Variations in the Iranian Waters of the Caspian Sea (Guilan region) during 2003-2004

Siamak Bagheri; Muhammet Turkoglu; Ali Abedini

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Mashhor Mansor

Universiti Sains Malaysia

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Muhammet Turkoglu

Çanakkale Onsekiz Mart University

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Foong Swee Yeok

Universiti Sains Malaysia

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Haifeng Gu

State Oceanic Administration

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A.E. Aksu

Memorial University of Newfoundland

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