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Featured researches published by Sibel Irmak.


Bioresource Technology | 2014

Biofuel production by liquefaction of kenaf (Hibiscus cannabinus L.) biomass.

Bahar Meryemoglu; Arif Hasanoğlu; Sibel Irmak; Oktay Erbatur

In this study, kenaf biomass, its dried hydrolysate residue (solid residue left after removing water from hydrolysate) and non-hydrolyzed kenaf residue (solid residue left after hydrolysis process) were liquefied at various temperatures. Hydrolysis of biomass was performed in subcritical water condition. The oil+gas yield of biomass materials increased as the temperature increased from 250 to 300°C. Increasing temperature to 350°C resulted in decreases in oil+gas contents for all biomass feeds studied. On the other hand, preasphaltene+asphaltene (PA+A) and char yields significantly decreased with increasing the process temperature. The use of carbon or activated carbon supported Ru catalyst in the process significantly decreased char and PA+A formations. Oils produced from liquefaction of kenaf, dried kenaf hydrolysate and non-hydrolyzed kenaf residue consist of fuel related components such as aromatic hydrocarbons, benzene and benzene derivative compounds, indane and trans/cis-decalin.


Lipids | 2006

Biocatalysis of linoleic acid to conjugated linoleic acid.

Sibel Irmak; Nurhan Turgut Dunford; Veneta Banskalieva; Michael Eisenmenger

CLA refers to a group of geometrical and positional isomers of linoleic acid (LA) with conjugated double bonds. CLA has been reported to have diverse health benefits and biological properties. Traditional organic synthesis is highly capital-intensive and results in an isomeric mixture of CLA isomers. Biotechnology presents new alternatives to traditional lipid manufacturing methods. The objective of this study was to examine the effect of protein isolation procedures on linoleate isomerase (LAI) recovery from microbial cells and biocatalysis of LA to CLA. Protein isolation experiments were carried out using Lactobacillus acidophilus L1 and two strains of Lactobacillus reuteri (ATCC 23272 and ATCC 55739). Under the same assay conditions, ATCC 55739 had the highest LAI activity among the microbial cultures examined in this study. Efficiency of cell lysis methods, which included various combinations of lysozyme and mutanolysin treatments in combination with sonication and osmotic rupture of cells with liquid nitrogen, was very low. Although treatment of cell material with a detergent (octylthioglucoyranoside) freed a significant amount of LAI activity into the solution, it was not sufficient to recover all the LAI activity from the residual cells. Crude LAI preparations produced mainly the cis-9,trans-11 CLA isomer. Time and substrate/protein ratio had a significant effect on biocatalysis of LA to CLA. It appears that the mechanism and kinetics of enzymatic conversion of LA to CLA are quite complex and requires further research using pure LAI preparations.


Bioresource Technology | 2012

Effect of support materials on supported platinum catalyst prepared using a supercritical fluid deposition technique and their catalytic performance for hydrogen-rich gas production from lignocellulosic biomass.

Burçak Kaya; Sibel Irmak; Arif Hesenov; Oktay Erbatur; Can Erkey

A number of supported Pt catalysts have been prepared by supercritical carbon dioxide deposition technique using various supports. The reduction of Pt precursor to metal performed by heat treatment under nitrogen flow. The prepared catalysts were evaluated for gasification of wheat straw biomass hydrolysates and glucose solution for hydrogen-rich gas production. The activities of the catalysts were highly affected by distribution, amount and particle sizes of platinum on the support. In general carbon-based supported Pt catalysts exhibited better catalytic activity compared to other supports to be used. Compared to biomass hydrolysate feed, gasification of glucose always resulted in higher volume of gas mixture, however, hydrogen selectivity was decreased in all catalyst except multi-walled carbon nanotube. The deposition of Pt particles inner side of that support makes the large organic substrates inaccessible to reach and react with those metal particles.


Journal of Agricultural and Food Chemistry | 2009

Effect of the solvent type and temperature on phytosterol contents and compositions of wheat straw, bran, and germ extracts.

Nurhan Turgut Dunford; Sibel Irmak; Ramakanth S. Jonnala

Wheat fractions, such as bran, germ, and straw, are rich in a number of health beneficial bioactive compounds. However, they have not been exploited to their full capacity for value-added product development. This study examines the potential of recovering phytosterol (PS)-enriched extracts from wheat germ, bran, and straw. The main objective of the study was to evaluate the effect of solvent type and temperature on PS content and composition in straw, bran, and germ extracts. Petroleum ether, chloroform, n-hexane, and ethanol were used as solvents. A pressurized solvent extraction system was used for extraction of wheat fractions. Germ extracts had the highest total PS content followed by straw and bran extracts. Beta-sitosterol, campesterol, and stigmasterol were the main PSs in all of the extracts. Ethanol extraction resulted in the lowest total PS recovery from germ. Solvent type had a significant effect on PS composition in straw extracts. beta-Sitosterol was the most abundant PS in straw hexane extracts (74% of total PS). Petroleum ether, chloroform, and ethanol extracted more stigmasterol than beta-sitosterol from straw. This study demonstrated that the solvent type and temperature had significant effects on both PS content and composition of extracts collected from wheat fractions. Because of the complex nature of the agricultural materials, solvent selection and process optimization need to be based on experimental data. Pressurized solvent extraction is a useful technique to screen complex biological materials for their composition and to determine processing conditions to be optimized.


Journal of Analytical Chemistry | 2010

Study on the stability of supercritical fluid extracted rosemary (Rosmarinus offcinalis L.) essential oil

Sibel Irmak; Kemal Solakyildirim; Arif Hesenov; Oktay Erbatur

The aim of this study was to examine the influence of storage conditions and duration on composition and antioxidant activity of supercritical fluid (SCF) extracted essential oil of rosemary (Rosmarinus officinalis L.). Supercritical extraction was carried out sequentially by using SCF carbondioxide in the first two steps and with 5% ethanol as entrainer in the third step. The compositions of the extracts were determined by gas chromatography/mass spectrometry. The total phenolics were analyzed using Folin-Ciocalteau assay. Antioxidant activities of the extracts were tested by β-carotene-linoleic acid bleaching method.The extracts stored at 4°C in the dark for 14 weeks were associated with slight changes in their composition. However, storage under indirect day light at room temperature caused considerable changes in the compositions of the oils due to the chemical transformations in some of their components. Both the total phenolic contents and the antioxidant activities were significantly decreased after storage.


Biomedical Optics Express | 2015

Spontaneous and coherent anti-Stokes Raman spectroscopy of human gastrocnemius muscle biopsies in CH-stretching region for discrimination of peripheral artery disease

Xi Huang; Sibel Irmak; Yongfeng Lu; Iraklis I. Pipinos; Jeyamkondan Subbiah

Peripheral Artery Disease (PAD) is a common manifestation of atherosclerosis, characterized by lower leg ischemia and myopathy in association with leg dysfunction. In the present study, Spontaneous and coherent anti-Stokes Raman scattering (CARS) spectroscopic techniques in CH-stretching spectral region were evaluated for discriminating healthy and diseased tissues of human gastrocnemius biopsies of control and PAD patients. Since Raman signatures of the tissues in the fingerprint region are highly complex and CH containing moieties are dense, CH-stretching limited spectral range was used to classify the diseased tissues. A total of 181 Raman spectra from 9 patients and 122 CARS spectra from 12 patients were acquired. Due to the high dimensionality of the data in Raman and CARS measurements, principal component analysis (PCA) was first performed to reduce the dimensionality of the data (6 and 9 principal scores for Raman and CARS, respectively) in the CH-stretching region, followed by a discriminant function analysis (DFA) to classify the samples into different categories based on disease severity. The CH2 and CH3 vibrational signatures were observed in the Raman and CARS spectroscopy. Raman and CARS data in conjunction with PCA-DFA analysis were capable of differentiating healthy and PAD gastrocnemius with an accuracy of 85.6% and 78.7%, respectively.


Journal of Polymers and The Environment | 2017

Food Industry Co-streams: Potential Raw Materials for Biodegradable Mulch Film Applications

Sanna Virtanen; Ravindra Reddy Chowreddy; Sibel Irmak; Kaisu Honkapää; Loren Isom

Vast amounts of co-streams are generated from plant and animal-based food processing industries. Efficient utilization of these co-streams is important from an economic and environmental perspective. Non-utilization or under-utilization of co-streams results in loss of potential revenues, increased disposal cost of these products and environmental pollution. At present, extensive research is taking place around the globe towards recycling of co-streams to generate value-added products. This review evaluates various co-streams from food processing industries as raw materials in developing biodegradable agricultural mulching applications. Among the agriculture-based co-streams, potato peels, tomato peels, carrot residues, apple pomace, coffee residues and peanut residues were reviewed with respect to production amount, composition, film forming components and film forming capabilities. Similarly, selected co-streams from slaughterhouses, poultry and fish processing industries were also reviewed and evaluated for the same purpose.


Environmentally Compatible Food Packaging | 2008

Additives for environmentally compatible active food packaging.

Sibel Irmak; Oktay Erbatur

Publisher Summary Conventional food packaging focuses on the appearance, size, and integrity of the package in which food safety has been maintained by incorporating synthetic preservative agents into the food. Active packaging is an integral part of food safety providing not only an inert barrier to outside influences but also some desirable functions such as high quality and microbiological safety and longer product shelf-life. The preservatives, preferably from natural sources, can be incorporated into the packaging material or bound on the surface either permanently or temporarily where, in the latter case, the antioxidant and/or antimicrobial agents are slowly released onto the packed food during the shelf-life. The oxygen permeability of the packaging materials can alter the headspace oxygen concentration. A reduction in oxygen concentration in a package can inhibit oxidative reactions as well as the growth of certain microorganisms. The potential application of nanotechnology methods for developing natural biopolymer-based biodegradable packaging materials, creating additional bioactive functions, might lead to dramatic changes in active food packaging. Nano-materials are being developed with enhanced physical properties to ensure better protection of food. The specific design of nano-scale and microscale internal structures in edible films and coatings might create powerful protection.


Journal of Food Protection | 2018

Radio-Frequency Processing for Inactivation of Salmonella enterica and Enterococcus faecium NRRL B-2354 in Black Peppercorn

Xinyao Wei; Soon Kiat Lau; Jayne Stratton; Sibel Irmak; Andreia Bianchini; Jeyamkondan Subbiah

Several Salmonella outbreaks linked to black pepper call for effective inactivation processes, because current decontamination methods result in quality deterioration. Radio-frequency (RF) heating provides a rapid heating rate and volumetric heating, resulting in a shorter come-up time. This allows for choosing a high-temperature and short-time combination to achieve the desired inactivation with minimal quality deterioration. The objectives of this study were to evaluate RF heating for inactivation of Salmonella enterica and Enterococcus faecium in black peppercorn and evaluate quality changes of RF-treated black peppercorn. Black peppercorns were inoculated with a five-strain cocktail of Salmonella or E. faecium to attain initial population levels of 6.8 and 7.3 log CFU/g, respectively, and were then adjusted to a moisture content of 12.7% (wet basis) and a water activity of 0.60 at room temperature. A stability test was performed to quantify the microbial reduction during inoculation and equilibration before RF heating inactivation. During RF heating, the cold spot was determined to be at the center on the top surface of the treated sample. In addition to inoculating the entire sample, an inoculated packed sample was placed at the cold spot of the tray. An RF heating time of 2.5 min provided a 5.31- and 5.26-log CFU/g reduction in the entire sample contained in the tray for Salmonella and E. faecium, respectively. Color parameters (L*, a*, b*), piperine content, total phenolics, scavenging activity, and most of the volatile compounds of 2.5-min RF-treated samples were not significantly different from those of the control samples. These data suggest that RF heating is a promising thermal inactivation treatment for Salmonella without significant quality deterioration, and E. faecium seems to be a suitable surrogate for Salmonella to validate the efficacy of RF heating of black peppercorn.


Archive | 2017

Biomass as Raw Material for Production of High‐Value Products

Sibel Irmak

Industrial production of a wide range of value‐added products heavily relies on fossil resources. Lignocellulosic biomass materials are receiving increased attention as a renewable, economical, and abundant alternative to fossil resources for the production of various value‐added products. Biomass feedstocks utilized for these productions include energy crops, agricultural biomass residues, forest biomass, and food‐based biomass wastes. Various conversion technologies are used for production value‐added products from biomass. Efficiencies of conversion technologies highly depend on the types of biomass used as raw materials that differ in contents and compositions of cellulose, hemicellulose, and lignin structures in biomass. In some conversion technologies, such as chemical, biochemical, and hydrothermal conversion techniques, biomass materials must be first broken down into smaller molecular weight components (e.g., oligosaccharides and monosaccharides) in order to be efficiently converted into target products. In this matter, pretreatment and hydrolysis play critical roles on the yield of the product(s). The chapter describes lignocellulosic materials that are used for production of top value‐added products and conversion technologies to produce products in high yields. Future developments in the conversion of lignocellulosic biomass into value‐added products are directly correlated to improvements of conversion technologies and selection the right types of biomass in the process.

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Burçak Kaya

Bursa Technical University

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Jeyamkondan Subbiah

University of Nebraska–Lincoln

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