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Dive into the research topics where Simon Linke is active.

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Featured researches published by Simon Linke.


Trends in Ecology and Evolution | 2008

Is conservation triage just smart decision making

Madeleine C. Bottrill; Liana N. Joseph; Josie Carwardine; Michael Bode; Carly N. Cook; Edward T. Game; Hedley S. Grantham; Salit Kark; Simon Linke; Eve McDonald-Madden; Robert L. Pressey; Susan Walker; Kerrie A. Wilson; Hugh P. Possingham

Conservation efforts and emergency medicine face comparable problems: how to use scarce resources wisely to conserve valuable assets. In both fields, the process of prioritising actions is known as triage. Although often used implicitly by conservation managers, scientists and policymakers, triage has been misinterpreted as the process of simply deciding which assets (e.g. species, habitats) will not receive investment. As a consequence, triage is sometimes associated with a defeatist conservation ethic. However, triage is no more than the efficient allocation of conservation resources and we risk wasting scarce resources if we do not follow its basic principles.


Journal of Applied Ecology | 2014

Understanding and predicting the combined effects of climate change and land‐use change on freshwater macroinvertebrates and fish

Chrystal S. Mantyka-Pringle; Tara G. Martin; David B. Moffatt; Simon Linke; Jonathan R. Rhodes

Climate change and land-use change are having substantial impacts on biodiversity world-wide, but few studies have considered the impact of these factors together. If the combined effects of climate and land-use change are greater than the effects of each threat individually, current conservation management strategies may be inefficient and/or ineffective. This is particularly important with respect to freshwater ecosystems because freshwater biodiversity has declined faster than either terrestrial or marine biodiversity over the last three decades. This is the first study to model the independent and combined effects of climate change and land-use change on freshwater macroinvertebrates and fish. Using a case study in south-east Queensland, Australia, we built a Bayesian belief network populated with a combination of field data, simulations, existing models and expert judgment. Different land-use and climate scenarios were used to make predictions on how the richness of freshwater macroinvertebrates and fish is likely to respond in future. We discovered little change in richness averaged across the region, but identified important impacts and effects at finer scales. High nutrients and high runoff as a result of urbanization combined with high nutrients and high water temperature as a result of climate change and were the leading drivers of potential declines in macroinvertebrates and fish at fine scales. Synthesis and applications. This is the first study to separate out the constituent drivers of impacts on biodiversity that result from climate change and land-use change. Mitigation requires management actions that reduce in-stream nutrients, slows terrestrial runoff and provides shade, to improve the resilience of biodiversity in streams. Encouragingly, the restoration of riparian habitats is identified as an important buffering tool that can mitigate the negative effects of climate change and land-use change.


Hydrobiologia | 2009

Relationship of fish and macroinvertebrate assemblages to environmental factors: implications for community concordance

Dana M. Infante; J. David Allan; Simon Linke; Richard H. Norris

Community concordance describes similarity in distributions and abundances of organisms from different taxonomic groups across a region of interest, with highly concordant communities assumed to respond similarly to major environmental gradients, including anthropogenic stressors. While few studies have explicitly tested for concordance among stream-dwelling organisms, it frequently is assumed that both macroinvertebrates and fish respond in concert to environmental factors, an assumption that has implications for their management. We investigated concordance among fish and macroinvertebrates from tributaries of two catchments in southeastern Michigan having varied landscape characteristics. Classifications of fish and macroinvertebrate assemblages resulted in groups distinguished by differences in taxonomic characteristics, functional traits, and stressor tolerance of their respective dominant taxa. Biological groups were associated with principal landscape gradients of the study region, which ranged from forests and wetlands on coarse surficial geology to agricultural lands on finer, more impervious surficial geology. Measures of stream habitat indicated more stable stream flows and greater heterogeneity of conditions at site groups with catchments comprising forests and wetlands on the coarsest geology, but did not distinguish well among remaining site groups, suggesting that habitat degradation may not be the driving mechanism leading to differences in groups. Despite broadly similar interpretations of relationships of site groups with landscape characteristics for both fish and macroinvertebrates, examination of site representation within groups indicated weak community concordance. Our results suggest that explicit responses of fish and macroinvertebrates to landscape factors vary, due to potential differences in their susceptibility to controls or to differences in the scale at which landscape factors influence these organisms.


Hydrobiologia | 2009

Identifying priority sites for the conservation of freshwater fish biodiversity in a Mediterranean basin with a high degree of threatened endemics

Virgilio Hermoso; Simon Linke; José Prenda

The Guadiana River basin’s freshwater fish species richness, endemicity and threatened status (92% of native species are threatened) highlight the need for a large-scale study to identify priority areas for their conservation. One of the most common problems in conservation planning is the assessment of a site’s relative value for the conservation of regional biodiversity. Here we used a two-tiered approach, which integrates an assessment of biodiversity loss and the evaluation of conservation value through site-specific measures. These measures based on the reference condition approach introduce the ability to make objective comparisons throughout the Guadiana River basin, thus avoiding a priori target areas. We identified a set of biodiversity priority areas of special conservation significance—which contain rare taxa as well as intact fish communities—because of their outstanding contribution to the basin’s biodiversity. The inclusion of complete sub-basins in these priority areas might guarantee an optimal solution in terms of spatial aggregation and connectivity. However, the high spatial fragmentation to which the Guadiana River basin is submitted due to river regulation highlights the necessity of a systematic approach to evaluate the capability of the identified priority areas to maintain the Guadiana’s freshwater fish biodiversity.


Hydrobiologia | 2003

Biodiversity: bridging the gap between condition and conservation

Simon Linke; Richard H. Norris

The aim of this study is to create a two-tiered assessment combining restoration and conservation, both needed for biodiversity management. The first tier of this approach assesses the condition of a site using a standard bioassessment method, AUSRIVAS, to determine whether significant loss of biodiversity has occurred because of human activity. The second tier assesses the conservation value of sites that were determined to be unimpacted in the first step against a reference database. This ensures maximum complementarity without having to set a priori target areas. Using the reference database, we assign site-specific and comparable coefficients for both restoration (Observed/Expected taxa with >50% probability of occurrence) and conservation values (O/E taxa with <50%, rare taxa). In a trial on 75 sites on rivers around Sydney, NSW, Australia we were able to identify three regions: (1) an area that may need restoration; (2) an area that had a high conservation value and; (3) a region that was identified as having significant biodiversity loss but with high potential to respond to rehabilitation and become a biodiversity hotspot. These examples highlight the use of the new framework as a comprehensive system for biodiversity assessment.


PLOS ONE | 2014

Systematic Conservation Planning for Groundwater Ecosystems Using Phylogenetic Diversity

Maria G. Asmyhr; Simon Linke; Grant C. Hose; David A. Nipperess

Aquifer ecosystems provide a range of important services including clean drinking water. These ecosystems, which are largely inaccessible to humans, comprise a distinct invertebrate fauna (stygofauna), which is characterized by narrow distributions, high levels of endemism and cryptic species. Although being under enormous anthropogenic pressure, aquifers have rarely been included in conservation planning because of the general lack of knowledge of species diversity and distribution. Here we use molecular sequence data and phylogenetic diversity as surrogates for stygofauna diversity in aquifers of New South Wales, Australia. We demonstrate how to incorporate these data as conservation features in the systematic conservation planning software Marxan. We designated each branch of the phylogenetic tree as a conservation feature, with the branch length as a surrogate for the number of distinct characters represented by each branch. Two molecular markers (nuclear 18S ribosomal DNA and mitochondrial cytochrome oxidase subunit I) were used to evaluate how marker variability and the resulting tree topology affected the site-selection process. We found that the sites containing the deepest phylogenetic branches were deemed the most irreplaceable by Marxan. By integrating phylogenetic data, we provide a method for including taxonomically undescribed groundwater fauna in systematic conservation planning.


Marine and Freshwater Research | 2011

Integration of environmental flow assessment and freshwater conservation planning: a new era in catchment management

Jeanne L. Nel; Eren Turak; Simon Linke; C. Brown

Integrated water resources management offers an ideal platform for addressing the goals of freshwater conservation and climate change adaptation. Environmental flow assessment and systematic conservation planning have evolved separately in respective aquatic and terrestrial realms, and both are central to freshwater conservation and can inform integrated water resources management. Integrating these two approaches is mutually beneficial. Environmental flow assessment considers dynamic flow regimes, measuring social, economic and ecological costs of development scenarios. Conservation planning systematically produces different conservation scenarios that can be used in assessing these costs. Integration also presents opportunities to examine impacts of climate change on conservation of freshwater ecosystems. We review progress in environmental flow assessment and freshwater conservation planning, exploring the mutual benefits of integration and potential ways that this can be achieved. Integration can be accomplished by using freshwater conservation planning outputs to develop conservation scenarios for assessment against different scenarios, and by assessing the extent to which each scenario achieves conservation targets. New tools that maximise complementarity by achieving conservation and flow targets simultaneously should also be developed.


PLOS ONE | 2013

Data Acquisition for Conservation Assessments: Is the Effort Worth It?

Virgilio Hermoso; Mark J. Kennard; Simon Linke

When identifying conservation priorities, the accuracy of conservation assessments is constrained by the quality of data available. Despite previous efforts exploring how to deal with imperfect datasets, little is known about how data uncertainty translates into errors in conservation planning outcomes. Here, we evaluate the magnitude of commission and omission error, effectiveness and efficiency of conservation planning outcomes derived from three datasets with increasing data quality. We demonstrate that investing in data acquisition might not always be the best strategy as the magnitude of errors introduced by new sites/species can exceed the benefits gained. There was a trade-off between effectiveness and efficiency due to poorly sampled rare species. Given that data acquisition is limited by the high cost and time required, we recommend focusing on improving the quality of data for those species with the highest level of uncertainty (rare species) when acquiring new data.


PLOS ONE | 2015

Multi-Action Planning for Threat Management: A Novel Approach for the Spatial Prioritization of Conservation Actions

Lorenzo Cattarino; Virgilio Hermoso; Josie Carwardine; Mark J. Kennard; Simon Linke

Planning for the remediation of multiple threats is crucial to ensure the long term persistence of biodiversity. Limited conservation budgets require prioritizing which management actions to implement and where. Systematic conservation planning traditionally assumes that all the threats in priority sites are abated (fixed prioritization approach). However, abating only the threats affecting the species of conservation concerns may be more cost-effective. This requires prioritizing individual actions independently within the same site (independent prioritization approach), which has received limited attention so far. We developed an action prioritization algorithm that prioritizes multiple alternative actions within the same site. We used simulated annealing to find the combination of actions that remediate threats to species at the minimum cost. Our algorithm also accounts for the importance of selecting actions in sites connected through the river network (i.e., connectivity). We applied our algorithm to prioritize actions to address threats to freshwater fish species in the Mitchell River catchment, northern Australia. We compared how the efficiency of the independent and fixed prioritization approach varied as the importance of connectivity increased. Our independent prioritization approach delivered more efficient solutions than the fixed prioritization approach, particularly when the importance of achieving connectivity was high. By spatially prioritizing the specific actions necessary to remediate the threats affecting the target species, our approach can aid cost-effective habitat restoration and land-use planning. It is also particularly suited to solving resource allocation problems, where consideration of spatial design is important, such as prioritizing conservation efforts for highly mobile species, species facing climate change-driven range shifts, or minimizing the risk of threats spreading across different realms.


Freshwater Science | 2014

Bioassessment of freshwater ecosystems using the Reference Condition Approach: comparing established and new methods with common data sets

Robert C. Bailey; Simon Linke; Adam G. Yates

Abstract: Although used in many jurisdictions around the world, analytical approaches of the Reference Condition Approach (RCA) to bioassessment of freshwater ecosystems have evolved quite slowly over the past 2 decades. For this special series of papers in Freshwater Science, researchers analyzed 3 data sets that included both benthic macroinvertebrate and environmental data from a number of reference sites. Australian Capital Territory (ACT) reference sites (ntotal = 107) were wadeable streams in the upper Murrumbidgee River catchment, Australian Capital Territory, Australia. Yukon Territory (YT) reference sites were wadeable streams (ntotal = 158) in the Yukon Territory, Canada, part of the Yukon River basin. Great Lakes (GL) sites (ntotal = 164) were all nearshore (<20 m) lentic sites in the North American Great Lakes. For each data set, sites were divided into model-building (training) and model-testing (validation) groups. Each validation site was further subjected to 3 levels of simulated degradation based on the sensitivity of the biota to eutrophication. The analytical approaches ranged from standard or slight modifications of methods used in national programs (Australian River Assessment [AUSRIVAS], Canadian Aquatic Biomonitoring Network [CABIN]), to improved matching of sites to be assessed and appropriate reference sites, and Bayesian and machine-learning modeling. In comparing Type 1 error rates (proportion of validation sites deemed not in reference condition) and power (proportion of simulated impairment sites deemed not in reference condition), we found no obvious pattern among the 3 data sets or approaches. Approaches commonly used in RCA programs would benefit from incorporating newer methods that better match reference and test-site environments and build better predictive models.

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Eren Turak

Office of Environment and Heritage

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Josie Carwardine

Commonwealth Scientific and Industrial Research Organisation

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