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Featured researches published by Stephanie Warner.


American Journal of Respiratory and Critical Care Medicine | 2009

Induction of Epithelial–Mesenchymal Transition in Primary Airway Epithelial Cells from Patients with Asthma by Transforming Growth Factor-β1

Tillie-Louise Hackett; Stephanie Warner; Dorota Stefanowicz; Furquan Shaheen; Dmitri V. Pechkovsky; Lynne Murray; Rochelle L. Argentieri; Anthony Kicic; Stephen M. Stick; Tony R. Bai; Darryl A. Knight

RATIONALE Airway remodeling in asthma is associated with the accumulation of fibroblasts, the primary cell responsible for synthesis and secretion of extracellular matrix proteins. The process by which the number of fibroblasts increases in asthma is poorly understood, but epithelial-mesenchymal transition (EMT) may play a significant role. OBJECTIVES To evaluate whether EMT occurs in primary airway epithelial cells (AECs), the mechanisms involved, and if this process is altered in asthmatic AECs. METHODS AECs were obtained from subjects with asthma (n = 8) and normal subjects without asthma (n = 10). Monolayer and air-liquid interface-AEC (ALI-AEC) cultures were treated with transforming growth factor (TGF)-beta1 (10 ng/ml) for 72 hours and assayed for mesenchymal and epithelial markers using quantitative polymerase chain reaction, confocal microscopy, and immunoblot. The involvement of BMP-7, Smad3, and MAPK-mediated signaling were also evaluated. MEASUREMENTS AND MAIN RESULTS TGF-beta1-induced EMT in AEC monolayers derived from subjects with asthma and normal donors. EMT was characterized by changes in cell morphology, increased expression of mesenchymal markers EDA-fibronectin, vimentin, alpha-smooth muscle actin, and collagen-1, and loss of epithelial markers E-cadherin and zonular occludin-1. Inhibition of TGF-beta1-induced signaling with Smad3-inhibiting siRNA or TGF-beta1-neutralizing antibodies prevented and reversed EMT, respectively, whereas BMP-7 had no effect. In ALI-AEC cultures derived from normal subjects, EMT was confined to basally situated cells, whereas in asthmatic ALI-AEC cultures EMT was widespread throughout the epithelium. CONCLUSIONS TGF-beta1 induces EMT in a Smad3-dependent manner in primary AECs. However, in asthmatic-derived ALI-AEC cultures, the number of cells undergoing EMT is greater. These findings support the hypothesis that epithelial repair in asthmatic airways is dysregulated.


The Journal of Allergy and Clinical Immunology | 2012

The airway epithelium nucleotide-binding domain and leucine-rich repeat protein 3 inflammasome is activated by urban particulate matter

Jeremy A. Hirota; Simon A. Hirota; Stephanie Warner; Dorota Stefanowicz; Furquan Shaheen; Paul L. Beck; Justin A. MacDonald; Tillie-Louise Hackett; Don D. Sin; Stephan F. van Eeden; Darryl A. Knight

BACKGROUND The airway epithelium is the first line of defense against inhaled insults and therefore must be capable of coordinating appropriate inflammatory and immune responses. OBJECTIVE We sought to test the hypothesis that the nucleotide-binding domain and leucine-rich repeat protein 3 (NLRP3) inflammasome, an intracellular danger-sensing complex, plays a critical role in airway epithelium-mediated immune responses to urban particulate matter (PM) exposure. METHODS In this study we (1) identified NLRP3 and caspase-1 expression in human airway epithelium bronchus and primary cells, (2) characterized NLRP3 inflammasome-mediated IL-1β production from human airway epithelium in response to PM, and (3) performed in vivo PM exposure experiments with wild-type and Nlrp3(-/-) mice. RESULTS Our results demonstrate that human airway epithelium contains a functional NLRP3 inflammasome that responds to PM exposure with caspase-1 cleavage and production of IL-1β. Exposure of Nlrp3(-/-) and wild-type mice to PM in vivo demonstrates NLRP3-dependent production of IL-1β in the lung, airway neutrophilia, and increases in CD11c(+hi)/MHC class II(+hi) cell numbers in intrathoracic lymph nodes. CONCLUSION Our study is the first to characterize airway epithelial NLRP3 inflammasome-mediated immune responses to PM exposure, which might have implications in patients with asthma and other lung diseases.


Current Opinion in Allergy and Clinical Immunology | 2008

Airway modeling and remodeling in the pathogenesis of asthma

Stephanie Warner; Darryl A. Knight

Purpose of reviewAsthma remains a severe health problem since current therapies are directed to suppressing, rather than preventing or reversing, the primary disease process. Clearly, a greater understanding of the pathogenesis of asthma is critical to the development of better therapeutic modalities. In this review, we discuss the recent advancements in research targeting the role of airway remodeling in asthma. Recent findingsEpithelial fragility and abnormalities are being recognized as important facets of asthma, as are other features of remodeling such as angiogenesis, goblet cell hyperplasia and thickened lamina reticularis. Significantly, these anomalies occur early in disease pathogenesis. However, their impact on disease severity remains unclear. SummaryAlthough an altered immune response is undoubtedly important to the pathogenesis of asthma, there is increasing evidence that the tissue-specific manifestations occur independently of inflammation and significantly impact on disease development and severity.


PLOS ONE | 2008

BMP-7 Does Not Protect against Bleomycin-Induced Lung or Skin Fibrosis

Lynne Murray; Tillie L. Hackett; Stephanie Warner; Furquan Shaheen; Rochelle L. Argentieri; Paul L. Dudas; Francis X. Farrell; Darryl A. Knight

Bone morphogenic protein (BMP)-7 is a member of the BMP family which are structurally and functionally related, and part of the TGFβ super family of growth factors. BMP-7 has been reported to inhibit renal fibrosis and TGFβ1-induced epithelial-mesenchymal transition (EMT), in part through negative interactions with TGFβ1 induced Smad 2/3 activation. We utilized in vivo bleomycin-induced fibrosis models in the skin and lung to determine the potential therapeutic effect of BMP-7. We then determined the effect of BMP-7 on TGFβ1-induced EMT in lung epithelial cells and collagen production by human lung fibroblasts. We show that BMP-7 did not affect bleomycin-induced fibrosis in either the lung or skin in vivo; had no effect on expression of pro-fibrotic genes by human lung fibroblasts, either at rest or following exposure to TGFβ1; and did not modulate TGFβ1 -induced EMT in human lung epithelial cells. Taken together our data indicates that BMP-7 has no anti-fibrotic effect in lung or skin fibrosis either in vivo or in vitro. This suggests that the therapeutic options for BMP-7 may be confined to the renal compartment.


The International Journal of Biochemistry & Cell Biology | 2015

Disruption of β-catenin/CBP signaling inhibits human airway epithelial-mesenchymal transition and repair.

Fatemeh Moheimani; Hollis M. Roth; Jennifer L. Cross; Andrew T. Reid; Furquan Shaheen; Stephanie Warner; Jeremy A. Hirota; Anthony Kicic; Teal S. Hallstrand; Michael Kahn; Stephen M. Stick; Philip M. Hansbro; Tillie-Louise Hackett; Darryl A. Knight

The epithelium of asthmatics is characterized by reduced expression of E-cadherin and increased expression of the basal cell markers ck-5 and p63 that is indicative of a relatively undifferentiated repairing epithelium. This phenotype correlates with increased proliferation, compromised wound healing and an enhanced capacity to undergo epithelial-mesenchymal transition (EMT). The transcription factor β-catenin plays a vital role in epithelial cell differentiation and regeneration, depending on the co-factor recruited. Transcriptional programs driven by the β-catenin/CBP axis are critical for maintaining an undifferentiated and proliferative state, whereas the β-catenin/p300 axis is associated with cell differentiation. We hypothesized that disrupting the β-catenin/CBP signaling axis would promote epithelial differentiation and inhibit EMT. We treated monolayer cultures of human airway epithelial cells with TGFβ1 in the presence or absence of the selective small molecule ICG-001 to inhibit β-catenin/CBP signaling. We used western blots to assess expression of an EMT signature, CBP, p300, β-catenin, fibronectin and ITGβ1 and scratch wound assays to assess epithelial cell migration. Snai-1 and -2 expressions were determined using q-PCR. Exposure to TGFβ1 induced EMT, characterized by reduced E-cadherin expression with increased expression of α-smooth muscle actin and EDA-fibronectin. Either co-treatment or therapeutic administration of ICG-001 completely inhibited TGFβ1-induced EMT. ICG-001 also reduced the expression of ck-5 and -19 independent of TGFβ1. Exposure to ICG-001 significantly inhibited epithelial cell proliferation and migration, coincident with a down regulation of ITGβ1 and fibronectin expression. These data support our hypothesis that modulating the β-catenin/CBP signaling axis plays a key role in epithelial plasticity and function.


Hepatology | 2013

Genome‐wide microRNA and messenger RNA profiling in rodent liver development implicates mir302b and mir20a in repressing transforming growth factor‐beta signaling

Wei Wei; Juan Hou; Olivia Alder; Xin Ye; Sam Lee; Rebecca Cullum; Andy Chu; Yongjun Zhao; Stephanie Warner; Darryl A. Knight; Decheng Yang; Steven J.M. Jones; Marco A. Marra; Pamela A. Hoodless

MicroRNAs (miRNAs) are recently discovered small RNA molecules that regulate developmental processes, such as proliferation, differentiation, and apoptosis; however, the identity of miRNAs and their functions during liver development are largely unknown. Here we investigated the miRNA and gene expression profiles for embryonic day (E)8.5 endoderm, E14.5 Dlk1+ liver cells (hepatoblasts), and adult liver by employing Illumina sequencing. We found that miRNAs were abundantly expressed at all three stages. Using K‐means clustering analysis, 13 miRNA clusters with distinct temporal expression patterns were identified. mir302b, an endoderm‐enriched miRNA, was identified as an miRNA whose predicted targets are expressed highly in E14.5 hepatoblasts but low in the endoderm. We validated the expression of mir302b in the endoderm by whole‐mount in situ hybridization. Interestingly, mir20a, the most highly expressed miRNA in the endoderm library, was also predicted to regulate some of the same targets as mir302b. We found that through targeting Tgfbr2, mir302b and mir20a are able to regulate transforming growth factor beta (TGFβ) signal transduction. Moreover, mir302b can repress liver markers in an embryonic stem cell differentiation model. Collectively, we uncovered dynamic patterns of individual miRNAs during liver development, as well as miRNA networks that could be essential for the specification and differentiation of liver progenitors. (HEPATOLOGY 2013)


BMC Pulmonary Medicine | 2017

Gene expression analysis in asthma using a targeted multiplex array

Christopher D. Pascoe; Ma’en Obeidat; Bryna A. Arsenault; Yunlong Nie; Stephanie Warner; Dorota Stefanowicz; Samuel Wadsworth; Jeremy A. Hirota; S. Jasemine Yang; Delbert R. Dorscheid; Chris Carlsten; Tillie L. Hackett; Chun Y. Seow; Peter D. Paré

BackgroundGene expression changes in the structural cells of the airways are thought to play a role in the development of asthma and airway hyperresponsiveness. This includes changes to smooth muscle contractile machinery and epithelial barrier integrity genes. We used a targeted gene expression arrays to identify changes in the expression and co-expression of genes important in asthma pathology.MethodsRNA was isolated from the airways of donor lungs from 12 patients with asthma (8 fatal) and 12 non-asthmatics controls and analyzed using a multiplexed, hypothesis-directed platform to detect differences in gene expression. Genes were grouped according to their role in airway dysfunction: airway smooth muscle contraction, cytoskeleton structure and regulation, epithelial barrier function, innate and adaptive immunity, fibrosis and remodeling, and epigenetics.ResultsDifferential gene expression and gene co-expression analyses were used to identify disease associated changes in the airways of asthmatics. There was significantly decreased abundance of integrin beta 6 and Ras-Related C3 Botulinum Toxin Substrate 1 (RAC1) in the airways of asthmatics, genes which are known to play an important role in barrier function. Significantly elevated levels of Collagen Type 1 Alpha 1 (COL1A1) and COL3A1 which have been shown to modulate cell proliferation and inflammation, were found in asthmatic airways. Additionally, we identified patterns of differentially co-expressed genes related to pathways involved in virus recognition and regulation of interferon production. 7 of 8 pairs of differentially co-expressed genes were found to contain CCCTC-binding factor (CTCF) motifs in their upstream promoters.ConclusionsChanges in the abundance of genes involved in cell-cell and cell-matrix interactions could play an important role in regulating inflammation and remodeling in asthma. Additionally, our results suggest that alterations to the binding site of the transcriptional regulator CTCF could drive changes in gene expression in asthmatic airways. Several asthma susceptibility loci are known to contain CTCF motifs and so understanding the role of this transcription factor may expand our understanding of asthma pathophysiology and therapeutic options.


American Journal of Respiratory Cell and Molecular Biology | 2013

Transcription Factor p63 Regulates Key Genes and Wound Repair in Human Airway Epithelial Basal Cells

Stephanie Warner; Tillie-Louise Hackett; Furquan Shaheen; Teal S. Hallstrand; Anthony Kicic; Stephen M. Stick; Darryl A. Knight


american thoracic society international conference | 2010

TGF-beta-Induces Epithelial-Mesenchymal Transition In Human Bronchial Explant Cultures From Normal And Asthmatic Subjects

Furquan Shaheen; Dorota Stefanowicz; Stephanie Warner; Darryl A. Knight; Tillie-Louise Hackett


Archive | 2017

Additional file 1: of Gene expression analysis in asthma using a targeted multiplex array

Christopher D. Pascoe; Ma’en Obeidat; Bryna A. Arsenault; Yunlong Nie; Stephanie Warner; Dorota Stefanowicz; Samuel Wadsworth; Jeremy A. Hirota; S. Jasemine Yang; Delbert R. Dorscheid; Chris Carlsten; Tillie L. Hackett; Cy Seow; P.D. Paré

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Furquan Shaheen

University of British Columbia

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Tillie-Louise Hackett

University of British Columbia

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Dorota Stefanowicz

University of British Columbia

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Jeremy A. Hirota

University of British Columbia

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Tillie L. Hackett

University of British Columbia

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Anthony Kicic

Princess Margaret Hospital for Children

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Stephen M. Stick

Princess Margaret Hospital for Children

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Bryna A. Arsenault

University of British Columbia

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Chris Carlsten

University of British Columbia

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