Stephen D. Archer

Rapid turnover of dissolved DMS and DMSP by defined bacterioplankton communities in the stratified euphotic zone of the North Sea

Bacterioplankton-driven turnover of the algal osmolyte, dimethylsulphoniopropionate (DMSP), and its degradation product, dimethylsulphide (DMS) the major natural source of atmospheric sulphur, were studied during a Lagrangian SF6-tracer experiment in the North Sea (60°N, 3°E). The water mass sampled within the euphotic zone was characterised by a surface mixed layer (from 0 m to 13–30 m) and a subsurface layer (from 13–30 m to 45–58 m) separated by a 2°C thermocline spanning 2 m. The fluxes of dissolved DMSP (DMSPd) and DMS were determined using radioactive tracer techniques. Rates of the simultaneous incorporation of 14C-leucine and 3H-thymidine were measured to estimate bacterioplankton production. Flow cytometry was employed to discriminate subpopulations and to determine the numbers and biomass of bacterioplankton by staining for nucleic acids and proteins. Bacterioplankton subpopulations were separated by flow cytometric sorting and their composition determined using 16S ribosomal gene cloning/sequencing and fluorescence in situ hybridisation with designed group-specific oligonucleotide probes. A subpopulation, dominated by bacteria related to Roseobacter-(α-proteobacteria), constituted 26–33% of total bacterioplankton numbers and 45–48% of biomass in both surface and subsurface layers. The other abundant prokaryotes were a group within the SAR86 cluster of γ-proteobacteria and bacteria from the Cytophaga–Flavobacterium—cluster. Bacterial consumption of DMSPd was greater in the subsurface layer (41 nM d−1) than in the surface layer (20 nM d−1). Bacterioplankton tightly controlled the DMSPd pool, particularly in the subsurface layer, with a turnover time of 2 h, whereas the turnover time of DMSPd in the surface layer was 10 h. Consumed DMSP satisfied the majority of sulphur demands of bacterioplankton, even though bacterioplankton assimilated only about 2.5% and 6.0% of consumed DMSPd sulphur in the surface and subsurface layers, respectively. Bacterioplankton turnover of DMS was also faster in the subsurface layer (12 h) compared to the surface layer (24 h). However, absolute DMS consumption rates were higher in the surface layer, due to higher DMS concentrations in this layer. The majority of DMS was metabolised into dissolved non-volatile products, and bacteria could satisfy only 1–3% of their sulphur demands from DMS. Thus, structurally similar bacterioplankton communities exerted strong control over DMSPd and DMS concentrations both in the subsurface layer and surface mixed layer.

Ocean-atmosphere trace gas exchange.

The oceans contribute significantly to the global emissions of a number of atmospherically important volatile gases, notably those containing sulfur, nitrogen and halogens. Such gases play critical roles not only in global biogeochemical cycling but also in a wide range of atmospheric processes including marine aerosol formation and modification, tropospheric ozone formation and destruction, photooxidant cycling and stratospheric ozone loss. A number of marine emissions are greenhouse gases, others influence the Earths radiative budget indirectly through aerosol formation and/or by modifying oxidant levels and thus changing the atmospheric lifetime of gases such as methane. In this article we review current literature concerning the physical, chemical and biological controls on the sea-air emissions of a wide range of gases including dimethyl sulphide (DMS), halocarbons, nitrogen-containing gases including ammonia (NH(3)), amines (including dimethylamine, DMA, and diethylamine, DEA), alkyl nitrates (RONO(2)) and nitrous oxide (N(2)O), non-methane hydrocarbons (NMHC) including isoprene and oxygenated (O)VOCs, methane (CH(4)) and carbon monoxide (CO). Where possible we review the current global emission budgets of these gases as well as known mechanisms for their formation and loss in the surface ocean.

A first appraisal of prognostic ocean DMS models and prospects for their use in climate models

Ocean dimethylsulfide (DMS) produced by marine biota is the largest natural source of atmospheric sulfur, playing a major role in the formation and evolution of aerosols, and consequently affecting climate. Several dynamic process-based DMS models have been developed over the last decade, and work is progressing integrating them into climate models. Here we report on the first international comparison exercise of both 1D and 3D prognostic ocean DMS models. Four global 3D models were compared to global sea surface chlorophyll and DMS concentrations. Three local 1D models were compared to three different oceanic stations (BATS, DYFAMED, OSP) where available time series data offer seasonal coverage of chlorophyll and DMS variability. Two other 1D models were run at one site only. The major point of divergence among models, both within 3D and 1D models, relates to their ability to reproduce the summer peak in surface DMS concentrations usually observed at low to mid- latitudes. This significantly affects estimates of global DMS emissions predicted by the models. The inability of most models to capture this summer DMS maximum appears to be constrained by the basic structure of prognostic DMS models: dynamics of DMS and dimethylsulfoniopropionate (DMSP), the precursor of DMS, are slaved to the parent ecosystem models. Only the models which include environmental effects on DMS fluxes independently of ecological dynamics can reproduce this summer mismatch between chlorophyll and DMS. A major conclusion of this exercise is that prognostic DMS models need to give more weight to the direct impact of environmental forcing (e.g., irradiance) on DMS dynamics to decouple them from ecological processes.

Marked seasonality in the concentrations and sea‐to‐air flux of volatile iodocarbon compounds in the western English Channel

[1] In the first seasonal study of volatile iodinated organic compounds (VICs) in the open sea, concentrations of five VICs were measured approximately weekly at four depths, over 20 months from July 2002 to April 2004, in the western English Channel. Seawater concentrations varied seasonally by an order of magnitude for all five compounds, with winter minima and, generally, late summer/autumn maxima. The average contribution to the dissolved VIC pool was chloroiodomethane (39%), diiodomethane (33%), iodomethane (22%), iodoethane (6%), and bromoiodomethane (4%). Total sea-to-air flux of iodine atoms carried by the VICs (15.5 mmol I m � 2 yr � 1 ) was approximately fourfold higher than that for iodomethane alone. This contrasts with previous studies that indicated that iodomethane was the main vector of iodine away from macroalgal beds. The estimated sea-to-air flux takes into account the significant airside control of the gas exchange of certain VICs, particularly diiodomethane; for which a 30% reduction in average daily flux was observed when an additional airside transfer velocity was included in the calculations. Because of their high reactivity, chloroiodomethane and diiodomethane are likely to drive the atmospheric organic iodine chemistry over these shelf seas, rather than the monohalogenated VICs.

Crucial uncertainties in predicting biological control of DMS emission

Environmental context. The CLAW hypothesis, published in Nature in 1987, highlighted the important potential role in climate regulation of dimethyl sulfide (DMS) production in the oceans. Since the hypothesis was presented, it has become increasingly apparent that a complex network of biological and physicochemical processes control DMS emissions from the oceans. The present essay discusses several of the crucial biological controls on DMS production that remain major uncertainties in our ability to decipher whether DMS cycling could contribute to the regulation of a warming climate.

Changes in DMS production and flux in relation to decadal shifts in ocean circulation

A fundamental question is are the biological processes regulating dimethylsulphide (DMS) production by the marine ecosystem interconnected and responding to atmospheric or ocean signals at decadal timescales? Related to this is a need to quantify how climate change affects these interconnections and understand the expected levels of natural variability on decadal timescales. To explore this we have used indicators of climate variability [the Gulf Stream North Wall (GSNW) and the North Atlantic Oscillation (NAO) indices] as probes to demonstrate that a marine ecosystem model, incorporating DMS production, can extract and amplify a climatic signal, which is spread across a variety of meteorological variables. The GSNW signal is imparted through the wind and cloud forcing, despite the fact there was not significant relationship observed between the GSNW index and the meteorological forcing data. The model simulations appear to reproduce observed decadal variability in phytoplankton community structure in the eastern North Atlantic and imply that DMS(P) biogeochemistry may vary on decadal timescales as a consequence of changes in community structure. The GSNW index is a potential indicator of such changes and there may have been a regime shift in DMSP production in the eastern North Atlantic coincident with that observed for plankton. Sensitivity analysis indicates that the impact of climate variability on DMS biogeochemistry may potentially be damped by the ability of microbial communities to adapt physiologically to the effects of changes in light and nutrients.

Supplement to physical exchanges at the air-sea interface: UK-SOLAS Field Measurements

This document is a supplement to “Physical Exchanges at the Air–Sea Interface: UK–SOLAS Field Measurements,” by Ian M. Brooks, Margaret J. Yelland, Robert C. Upstill-Goddard, Philip D. Nightingale, Steve Archer, Eric d’Asaro, Rachael Beale, Cory Beatty, Byron Blomquist, A. Anthony Bloom, Barbara J. Brooks, John Cluderay, David Coles, John Dacey, Michael DeGrandpre, Jo Dixon, William M. Drennan, Joseph Gabriele, Laura Goldson, Nick Hardman-Mountford, Martin K. Hill, Matt Horn, Ping-Chang Hsueh, Barry Huebert, Gerrit de Leeuw, Timothy G. Leighton, Malcolm Liddicoat, Justin J. N. Lingard, Craig McNeil, James B. McQuaid, Ben I. Moat, Gerald Moore, Craig Neill, Sarah J. Norris, Simon O’Doherty, Robin W. Pascal, John Prytherch, Mike Rebozo, Erik Sahlee, Matt Salter, Ute Schuster, Ingunn Skjelvan, Hans Slagter, Michael H. Smith, Paul D. Smith, Meric Srokosz, John A. Stephens, Peter K. Taylor, Maciej Telszewski, Roisin Walsh, Brian Ward, David K. Woolf, Dickon Young, and Henk Zemmelink (Bull. Amer. Meteor. Soc., 90, 629–644) • ©2009 American Meteorological Society • Corresponding author: Ian M. Brooks, Institute for Climate and Atmospheric Science, School of Earth and Environment, University of Leeds, Leeds LS2 9JT, United Kingdom • E-mail: i.brooks@see.leeds.ac.uk • DOI:10.1175/2008BAMS2578.2

Scientific diving under sea ice in the Southern ocean

Scientific Diving techniques were employed during a 54 day oceanographic research cruise to the Bellingshausen Sea, Southern Ocean (65°S–72°S, 80°W–87°W), in order to position sampling and data collecting instrumentation beneath sea ice. Eight Scientific Divers and a Field Diving Officer safely completed 112 individual dives (range 2–80 minutes, 2–28 m); 94 of these were roped dives through holes cut in 1 m thick sea ice. Seawater temperature was −1.8°C, horizontal visibility 30 m+ and water depth 600 m or more. No problems were encountered with the diving equipment used. Diving techniques enabled the collection of an important data set describing the dynamics of phytoplankton and zooplankton growth beneath sea ice. Recommendations for future under-ice oceanic scientific diving inc1ude the use of dive tables with ascent rates of less than 15 m/min, the provision for therapeutic oxygen at the dive site, and adequate shelter for surface tenders.

Physiological responses of Oxyrrhis marina to a diet of virally infected Emiliania huxleyi

The coccolithophore Emiliania huxleyi forms some of the largest phytoplankton blooms in the ocean. The rapid demise of these blooms has been linked to viral infections. E. huxleyi abundance, distribution, and nutritional status make them an important food source for the heterotrophic protists which are classified as microzooplankton in marine food webs. In this study we investigated the fate of E. huxleyi (CCMP 374) infected with virus strain EhV-86 in a simple predator-prey interaction. The ingestion rates of Oxyrrhis marina were significantly lower (between 26.9 and 50.4%) when fed virus-infected E. huxleyi cells compared to non-infected cells. Despite the lower ingestion rates, O. marina showed significantly higher growth rates (between 30 and 91.3%) when fed infected E. huxleyi cells, suggesting higher nutritional value and/or greater assimilation of infected E. huxleyi cells. No significant differences were found in O. marina cell volumes or fatty acids profiles. These results show that virally infected E. huxleyi support higher growth rates of single celled heterotrophs and in addition to the ‘‘viral shunt’’ hypothesis, viral infections may also divert more carbon to mesozooplankton grazers. Subjects Marine Biology, Microbiology, Virology, Biological Oceanography

Processes That Contribute to Decreased Dimethyl Sulfide Production in Response to Ocean Acidification in Subtropical Waters

Long-term time series data show that ocean acidification is occurring in the subtropical oceans. As a component of an in situ mesocosm experiment carried out off Gran Canaria in the subtropical North Atlantic, we examined the influence of ocean acidification on the net production of dimethylsulfide (DMS). Over 23 days under oligotrophic conditions, time-integrated DMS concentrations showed an inverse relationship of −0.21 ± 0.02 nmol DMS nmol−1 H+ across the gradient of H+ concentration of 8.8–23.3 nmol l−1, equivalent to a range of pCO2 of 400–1,252 atm. Proportionally similar decreases in the concentrations of both dissolved and particulate dimethylsulfoniopropionate (DMSP) were observed in relation to increasing H+ concentration between the mesocosms. The reduced net production of DMSP with increased acidity appeared to result from a decrease in abundance of a DMSP-rich nanophytoplankton population. A 35S-DMSP tracer approach was used to determine rates of dissolved DMSP catabolism, including DMS production, across the mesocosm treatments. Over a phase of increasing DMS concentrations during the experiment, the specific rates of DMS production were significantly reduced at elevated H+ concentration. These rates were closely correlated to the rates of net DMS production indicating that transformation of dissolved DMSP to DMS by bacteria was a major component of DMS production. It was not possible to resolve whether catabolism of DMSP was directly influenced by H+ concentrations or was an indirect response in the bacterial community composition associated with reduced DMSP availability. There is a pressing need to understand how subtropical planktonic communities respond to the predicted gradual prolonged ocean acidification, as alterations in the emission of DMS from the vast subtropical oceans could influence atmospheric chemistry and potentially climate, over a large proportion of the Earths surface.