Sujatha Sampath

Spider Glue Proteins Have Distinct Architectures Compared with Traditional Spidroin Family Members

Background: Spiders extrude adhesive glues to form connection joints that mediate web construction and prey wrapping. Results: DNA microarray analysis and mass spectrometry reveal new protein glue constituents that comprise connection joints. Conclusion: Spider glue proteins represent a diverse group of polypeptides with distinct molecular architectures. Significance: Learning how spider glues mediate the fusion of fibers is crucial for understanding adhesion mechanisms in biology. Adhesive spider glues are required to perform a variety of tasks, including web construction, prey capture, and locomotion. To date, little is known regarding the molecular and structural features of spider glue proteins, in particular bioadhesives that interconnect dragline or scaffolding silks during three-dimensional web construction. Here we use biochemical and structural approaches to identify and characterize two aggregate gland specific gene products, AgSF1 and AgSF2, and demonstrate that these proteins co-localize to the connection joints of both webs and wrapping silks spun from the black widow spider, Latrodectus hesperus. Protein architectures are markedly divergent between AgSF1 and AgSF2, as well as traditional spider silk fibroin family members, suggesting connection joints consist of a complex proteinaceous network. AgSF2 represents a nonglycosylated 40-kDa protein that has novel internal amino acid block repeats with the consensus sequence NVNVN embedded in a glycine-rich matrix. Analysis of the amino acid sequence of AgSF1 reveals pentameric QPGSG iterations that are similar to conserved modular elements within mammalian elastin, a rubber-like elastomeric protein that interfaces with collagen. Wet-spinning methodology using purified recombinant proteins show AgSF1 has the potential to self-assemble into fibers. X-ray fiber diffraction studies performed on these synthetic fibers reveal the presence of noncrystalline domains that resemble classical rubber networks. Collectively, these data support that the aggregate gland serves to extrude a protein mixture that contains substances that allow for the self-assembly of fiber-like structures that interface with dragline silks to mediate prey capture.

Reproducing Natural Spider Silks’ Copolymer Behavior in Synthetic Silk Mimics

Dragline silk from orb-weaving spiders is a copolymer of two large proteins, major ampullate spidroin 1 (MaSp1) and 2 (MaSp2). The ratio of these proteins is known to have a large variation across different species of orb-weaving spiders. NMR results from gland material of two different species of spiders, N. clavipes and A. aurantia , indicates that MaSp1 proteins are more easily formed into β-sheet nanostructures, while MaSp2 proteins form random coil and helical structures. To test if this behavior of natural silk proteins could be reproduced by recombinantly produced spider silk mimic protein, recombinant MaSp1/MaSp2 mixed fibers as well as chimeric silk fibers from MaSp1 and MaSp2 sequences in a single protein were produced based on the variable ratio and conserved motifs of MaSp1 and MaSp2 in native silk fiber. Mechanical properties, solid-state NMR, and XRD results of tested synthetic fibers indicate the differing roles of MaSp1 and MaSp2 in the fiber and verify the importance of postspin stretching treatment in helping the fiber to form the proper spatial structure.

A neutron and x-ray diffraction study of calcium aluminate glasses

Spallation neutron diffraction and high-energy x-ray diffraction methods have been used to study CaO:Al2O3 glasses at the 64:36 mol% eutectic and 50:50 mol% compositions. The samples were produced by the containerless cooling of liquid droplets heated by a laser beam and suspended in an aerodynamic levitator. The results show aluminium on average to be surrounded by 4.0(1) oxygen atoms at a distance of 1.76(1) A in CaAl2O4, which increases to 4.8(1) at the eutectic composition. The two techniques have also been combined to reveal the local structure of the calcium atoms in the glass. In CaAl2O4 the calcium is found to be surrounded, on average, by 5.6(2) oxygen atoms at a distance of 2.38 A. The Ca coordination decreases to the unusually low value of 3.9(2) oxygen atoms at a distance of 2.40 A at the eutectic composition. No additional Ca–O correlations are observed up to 2.7 A, but longer bonds cannot be ruled out. The higher-r correlations are shown to be similar in the two glasses, suggesting that both Al and Ca may act as network formers. The results are compared to previous studies on splat-quenched glasses with compositions near the eutectic.

Structural quantum isotope effects in amorphous beryllium hydride

The structure factors for amorphous BeD2 and BeH2 were measured using synchrotron x-ray and neutron diffraction techniques. The results show that the structure of amorphous BeD2 is comprised of corner-sharing tetrahedra and is therefore analogous to amorphous H2O and BeF2. A substantial increase in the height of the first sharp x-ray diffraction peak of BeD2 compared to BeH2 is interpreted as a marked increase in the extent of intermediate range order in BeD2 due to stronger network formation. A real-space comparison with liquid water, reveals that the structural isotopic quantum effects are quite different in the two hydrides.

Structural hysteresis in dragline spider silks induced by supercontraction: an X-ray fiber micro-diffraction study

Interaction with water causes shrinkage and significant changes in the structure of spider dragline silks, which has been referred to as supercontraction in the literature. Preferred orientation or alignment of protein chains with respect to the fiber axis is extensively changed during this supercontraction process. Synchrotron x-ray micro-fiber diffraction experiments have been performed on Nephila clavipes and Argiope aurantia major and minor ampullate dragline spider fibers in the native dry, contracted (by immersion in water) and restretched (from contracted) states. Changes in the orientation of β-sheet nanocrystallites and the oriented component of the amorphous network have been determined from wide-angle x-ray diffraction patterns. While both the crystalline and amorphous components lose preferred orientation on wetting with water, the nano-crystallites regain their orientation on wet-restretching, whereas the oriented amorphous components only partially regain their orientation. Dragline major ampullate silks in both the species contract more than their minor ampullate silks.

Vibrational dynamics of amorphous beryllium hydride and lithium beryllium hydrides.

The vibrational density of states of amorphous beryllium hydride (a-BeH2) and lithium beryllium hydrides have been studied using inelastic neutron scattering, infrared, and Raman spectroscopies. The positions of the symmetrical (120-180 meV) and antisymmetrical (200-260 meV) Be-H stretching modes and those of the H-Be-H bending mode (50-120 meV) have been determined and the results discussed and compared with recent theoretical calculations. With the addition of lithium to the beryllium hydride network, the vibrational bands are shifted to lower energies, indicating a less rigid network.

Hydrogen mobility in the lightest reversible metal hydride, LiBeH3

Lithium-beryllium metal hydrides, which are structurally related to their parent compound, BeH2, offer the highest hydrogen storage capacity by weight among the metal hydrides (15.93 wt. % of hydrogen for LiBeH3). Challenging synthesis protocols have precluded conclusive determination of their crystallographic structure to date, but here we analyze directly the hydrogen hopping mechanisms in BeH2 and LiBeH3 using quasielastic neutron scattering, which is especially sensitive to single-particle dynamics of hydrogen. We find that, unlike its parent compound BeH2, lithium-beryllium hydride LiBeH3 exhibits a sharp increase in hydrogen mobility above 265 K, so dramatic that it can be viewed as melting of hydrogen sublattice. We perform comparative analysis of hydrogen jump mechanisms observed in BeH2 and LiBeH3 over a broad temperature range. As microscopic diffusivity of hydrogen is directly related to its macroscopic kinetics, a transition in LiBeH3 so close to ambient temperature may offer a straightforward and effective mechanism to influence hydrogen uptake and release in this very lightweight hydrogen storage compound.