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Featured researches published by Sule Ayla.


Oncology Letters | 2014

Expression profiling of stem cell signaling alters with spheroid formation in CD133high/CD44high prostate cancer stem cells

Gulperi Oktem; Ayhan Bilir; Ruchan Uslu; Sevinc Inan; Sirin Bakti Demiray; Harika Atmaca; Sule Ayla; Ogun Sercan; Ayşegül Uysal

Cancer stem cells (CSC) isolated from multiple tumor types differentiate in vivo and in vitro when cultured in serum; however, the factors responsible for their differentiation have not yet been identified. The first aim of the present study was to identify CD133high/CD44high DU145 prostate CSCs and compare their profiles with non-CSCs as bulk counterparts of the population. Subsequently, the two populations continued to be three-dimensional multicellular spheroids. Differentiation was then investigated with stem cell-related genomic characteristics. Polymerase chain reaction array analyses of cell cycle regulation, embryonic and mesenchymal cell lineage-related markers, and telomerase reverse transcriptase (TERT) and Notch signaling were performed. Immunohistochemistry of CD117, Notch1, Jagged1, Delta1, Sox2, c-Myc, Oct4, KLF4, CD90 and SSEA1 were determined in CSC and non-CSC monolayer and spheroid subcultures. Significant gene alterations were observed in the CD133high/CD44high population when cultured as a monolayer and continued as spheroid. In this group, marked gene upregulation was determined in collagen type 9 α1, Islet1 and cyclin D2. Jagged1, Delta-like 3 and Notch1 were respectively upregulated genes in the Notch signaling pathway. According to immunoreactivity, the staining density of Jagged1, Sox2, Oct4 and Klf-4 increased significantly in CSC spheroids. Isolated CSCs alter their cellular characterization over the course of time and exhibit a differentiation profile while maintaining their former surface antigens at a level of transcription or translation. The current study suggested that this differentiation process may be a mechanism responsible for the malignant process and tumor growth.


Oncology Reports | 2014

Cancer stem cell differentiation: TGFβ1 and versican may trigger molecules for the organization of tumor spheroids.

Gulperi Oktem; Ogun Sercan; Ummu Guven; Ruchan Uslu; Ayşegül Uysal; Gamze Goksel; Sule Ayla; A. Bilir

Cancer stem cells (CSCs) have the ability to self-renew similar to normal stem cells. This process is linked with metastasis and resistance to chemotherapy and radiotherapy. In the present study, we constructed an in vitro differentiation model for CSCs. CSCs isolated and proliferated for one passage were maintained as monolayers or spheroid-forming cells with serum included media for differentiation process. Differentiation of adhesion molecules and cellular ultrastructural properties were investigated and compared in both monolayer and spheroid cultures. CD133+/CD44+ cancer-initiating cells were isolated from DU-145 human prostate cancer cell line monolayer cultures and propagated as tumor spheroids and compared with the remaining heterogeneous cancer cell bulk population. Microarray-based gene expression analysis was applied to determine genes with differential expression and protein expression levels of candidates were analyzed by immunohistochemistry. Electron microscopy showed detailed analysis of morphology. TGFβ1 was found to be significantly upregulated in monolayer CSCs. High expression levels of VCAN, COL7A1, ITGβ3, MMP16, RPL13A, COL4A2 and TIMP1 and low expression levels of THBS1, MMP1 and MMP14 were detected when CSCs were maintained as serum-grown prostate CSC spheroids. Immunohistochemistry supported increased immunoreactivity of TGFβ1 in monolayer cultures and VCAN in spheroids. CSCs were found to possess multipotential differentiation capabilities through upregulation and/or downregulation of their markers. TGFβ1 is a triggering molecule, it stimulates versican, Col7A1, ITGβ3 and, most importantly, the upregulation of versican was only detected in CSCs. Our data support a model where CSCs must be engaged by one or more signaling cascades to differentiate and initiate tumor formation. This mechanism occurs with intracellular and extracellular signals and it is possible that CSCc themselves may be a source for extracellular signaling. These molecules functioning in tumor progression and differentiation may help develop targeted therapy.


International Journal of Molecular Medicine | 2014

Induced growth inhibition, cell cycle arrest and apoptosis in CD133+/CD44+ prostate cancer stem cells by flavopiridol

Burak Cem Soner; Huseyin Aktug; Eda Acikgoz; Fahriye Duzagac; Ummu Guven; Sule Ayla; Çağ Çal; Gulperi Oktem

Flavopiridol is a flavone that inhibits several cyclin-dependent kinases and exhibits potent growth-inhibitory activity, apoptosis and G1-phase arrest in a number of human tumor cell lines. Flavopiridol is currently undergoing investigation in human clinical trials. The present study focused on the effect of flavopiridol in cell proliferation, cell cycle progression and apoptosis in prostate cancer stem cells (CSCs). Therefore, cluster of differentiation 133 (CD133)+high/CD44+high prostate CSCs were isolated from the DU145 human prostate cancer cell line. The cells were treated with flavopiridol in a dose- and time-dependent manner to determine the inhibitory effect. Cell viability and proliferation were analyzed and the efficiency of flavopiridol was assessed using the sphere-forming assay. Flavopiridol was applied to monolayer cultures of CD133high/CD44high human prostate CSCs at the following final concentrations: 100, 300, 500 and 1000 nM. The cultures were incubated for 24, 48 and 72 h. The half maximal inhibitory concentration (IC50) value of the drug was determined as 500 nM for monolayer cells. Dead cells were analyzed prior and subsequent to exposure to increasing flavopiridol doses. Annexin-V and immunofluorescence analyses were performed for the evaluation of apoptotic pathways. According to the results, flavopiridol treatment caused significant growth inhibition at 500 and 1000 nM when compared to the control at 24 h. G0/G1 analysis showed a statistically significant difference between 100 and 500 nM (P<0.005), 100 and 1000 nM (P<0.001), 300 and 1000 nM (P<0.001), and 500 and 1000 nM (P<0.001). Flavopiridol also significantly influenced the cells in the G2/M phase, particularly at high-dose treatments. Flavopiridol induced growth inhibition and apoptosis at the IC50 dose (500 nM), resulting in a significant increase in immunofluorescence staining of caspase-3, caspase-8 and p53. In conclusion, the present results indicated that flavopiridol could be a useful therapeutic agent for prostate CSCs by inhibiting tumor growth and malignant progression, and inducing apoptosis.


International Journal of Gynecological Cancer | 2012

Cancer stem cell and embryonic development-associated molecules contribute to prognostic significance in ovarian cancer.

Gulperi Oktem; Muzaffer Sanci; Ayhan Bilir; Yusuf Yildirim; Sibel Demir Keçeci; Sule Ayla; Sevinc Inan

Objectives Embryonic molecules and cancer stem cell signaling resemble each other, and they organize cancer modality. We hypothesized that similar immunohistochemical expressions between tumor spheroids and patients’ samples compared with clinical relevance would give an important clue in patients’ prognosis. Methods Immunohistochemical expression of c-kit, Notch1, Jagged1, and Delta1 in 50 cases of primary ovarian tumors (10 endometrioid, 10 serous, 10 mucinous adenocarcinoma, 10 borderline serous, and 10 borderline mucinous tumors) and MDAH-2774 spheroids were investigated. Results were compared in both spheroids and tumor samples with morphologic parameters (histological grade) and clinical data (age, stage, tumor size, and metastasis). Results High c-kit and Notch1 immunoreactivity was shown in spheroids, but interestingly immunoreactivity of these molecules in tumor samples was different from patients’ clinicopathological characteristics. In serous carcinoma, metastasis correlated with Notch1 immunoexpression; in mucinous carcinoma, Jagged1 immunohistochemistry correlated with grade, stage, and metastasis of tumor; in borderline serous and mucinous tumors, Jagged1 correlated with high grade. Moreover, Jagged1 correlated with stage and Notch1 with size in borderline mucinous tumor. Endometrioid carcinoma statistics showed that there was a correlation between age and Notch1 expression. Conclusion Notch1, Jagged1, and Delta1 expressions might be useful markers for clinical prognosis of ovarian carcinomas; and Notch pathway, one of the most intensively studied putative therapeutic targets, may be a useful marker for cancer. Consequently, Jagged1 could be a marker for tumor grades and Notch1 as a marker for metastases.


Journal of Pediatric Hematology Oncology | 2014

Notch signaling-related therapeutic strategies with novel drugs in neuroblastoma spheroids.

Sule Ayla; Ayhan Bilir; Burak Cem Soner; Ozlem Yilmaz-Dilsiz; Mine Erguven; Gulperi Oktem

Neuroblastoma is a severe pediatric tumor characterized by poor prognosis. Identification of novel molecular targets and diversion of investigations on new drug trials is mandatory for cancer therapy. In this study, vinorelbine tartrate, lithium chloride, clomipramine, and medroxyprogesterone acetate are used for the possible new treatment modalities in neuroblastoma cells. Notch and c-kit are novel molecules in cancer research, and Notch pathway is one of the emerging molecules in the neuroblastoma pathogenesis. Cytotoxic effects of these drugs at different time points, with different doses were studied in the SH-SY5Y human neuroblastoma cell line. Analysis of Notch and c-kit signaling with immunohistochemistry were constituted in multicellular tumor spheroids, and morphologic investigation was performed for digital imaging of cancer stem cells (CSCs) with electron microscopy. Size kinetics of spheroids was also determined after drug treatment. Results showed that all drugs were cytotoxic for neuroblastoma cells. Yet, this cytotoxic action did not correlate with the inhibitory effects in cell signaling. Neuroblastoma spheroids showed increased immunoreactivity of Notch signaling and c-kit. Altered ultrastructural CSCs morphology was observed after clomipramine and medroxyprogesterone acetate treatment compared with other drugs. Lithium chloride showed cellular membrane destruction for both CSCs and the remaining population. In this study, independent effects of cytotoxicity in tumor cells with respect to CSCs were determined. Redundant cells, which are the bulk population in tumor a compound, destroyed with therapy, were neither a target for treatment nor a remarkable investigation of cancer.


Cancer Research | 2013

Abstract 255: Expressionprofiling of stem cell signaling alters with spheroid formation in CD133high/CD44high prostate cancer stem cells.

Gulperi Oktem; Ayhan Bilir; Ruchan Uslu; Sevinc Inan; Sirin Bakti Demiray; Harika Atmaca; Sule Ayla; Ayşegül Uysal

Proceedings: AACR 104th Annual Meeting 2013; Apr 6-10, 2013; Washington, DC Introduction: Cancer stem cell (CSCs) theory provides new insight into the formation of tumors. Characterization of the pathways which regulate CSCs activity will facilitate the development of targeted therapies. Isolation of CSCs from multiple tumor types differentiate both in vivo and in vitro when cultured in serum, yet the factors responsible for their differentiation have not yet been identified. Current challenge is the enrichment of CSCs from established cell lines variety of solid tumors has been developed as three-dimensional (3D) cell culture. 3D spheroid model is a new technique for propagation of cells in-vitro using serum free medium and cultured low-adherence conditions and present a convenient model to investigate differentiating cancer cells. The objective of this study is to identify CD 133high/ CD44 high prostate CSCs and compare these profiles with non-sorting cells as bulk counterparts of the population. These two populations have been continued to be 3D multicellular spheroids and differentiation has been investigated with stem cell related genomic characteristics. Since CSCs are proliferate in a trice in tumor mass, our aim is to reveal the changes of cellular profile and heterogeneity of proliferated cells in 3D multicellular tumor spheroids. Material and method: CSCs and non- CSCs were sorted with FACS and PCR array analysis of cell cycle regulation, embryonic and mesenchymal cell lineage related markers, TERT and Notch signaling were performed in both monolayer and spheroids. Immunohistochemistry of CD117, Notch1, Jagged1, Delta1, Sox2, C-myc, Oct4, KLF4, CD90 and SSEA1 were determined in groups. Results and discussion: Most significant gene alteration observed CD 133high/ CD44 high population when in monolayer cells continued as spheroid. In this group remarkable up regulation was determined in Collagen type 9 alpha1 (COL9A1), Islet1 (ISL1) and Cyclin D2. Jagged1, DLL3 and Notch1 were respectively up-regulated genes in Notch signaling. According to immunoreactivity staining density of Jagged1, Sox2, Oct4 and Klf-4 increased significantly in sorting spheroids when compared non-sorting monolayer cells. Conclusion: Isolated CSCs in human tumors could be altered their cellular characterization in the course of time and display a differentiation with maintaining their former surface antigens at a level of transcription or translation. In this study we have indicated this differentiation theory by using in-vitro 3D- spheroid model. It was observed that the cells alter their gene expression profiles during this process. Our hypothesis was supported by the observation that most significant gene alteration was in CD 133high/ CD44 high population when monolayer cells were allowed to grow as spheroid. In fact, this differentiation could be a principal mechanism which is responsible from malign process and tumor growth. Citation Format: Gulperi Oktem, Ayhan Bilir, Ruchan Uslu, Sevinc Inan, Sirin Bakti Demiray, Harika Atmaca, Sule Ayla, Aysegul Uysal. Expressionprofiling of stem cell signaling alters with spheroid formation in CD133high/CD44high prostate cancer stem cells. [abstract]. In: Proceedings of the 104th Annual Meeting of the American Association for Cancer Research; 2013 Apr 6-10; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2013;73(8 Suppl):Abstract nr 255. doi:10.1158/1538-7445.AM2013-255


International Journal of Cell Biology | 2011

Doxorubicin Induced Nephrotoxicity: Protective Effect of Nicotinamide

Sule Ayla; İsmail Seçkin; Gamze Tanriverdi; Mediha Eser; Burak Cem Soner; Gulperi Oktem


Journal of Assisted Reproduction and Genetics | 2013

Notch signaling pathway in cumulus cells can be a novel marker to identify poor and normal responder IVF patients

Gamze Tanriverdi; Seçnur Denir; Sule Ayla; Ayhan Bilir; Hüseyin Oktar; Ismail Cepni; Tulay Irez


Oncology Research | 2006

Role of intercellular communications in breast cancer multicellular tumor spheroids after chemotherapy.

Gulperi Oktem; Ayhan Bilir; Sule Ayla; Altug Yavasoglu; Gamze Goksel; Guray Saydam; Ayşegül Uysal


Oncology Reports | 2006

Effect of apoptosis and response of extracellular matrix proteins after chemotherapy application on human breast cancer cell spheroids

Gulperi Oktem; Seda Vatansever; Sule Ayla; Ayşegül Uysal; S. Aktaş; B. Karabulut; Ayhan Bilir

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Sevinc Inan

Celal Bayar University

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Ogun Sercan

Dokuz Eylül University

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