Susanne E. Tanner

Assessing food web dynamics and relative importance of organic matter sources for fish species in two Portuguese estuaries: a stable isotope approach.

Stable carbon and nitrogen isotopes (δ¹³C, δ¹⁵N) were used to analyse food web dynamics of two of the main estuaries of the Portuguese coast: Tejo and Mira. The ultimate sources of organic matter supporting production of some of the most abundant and commercially important fish species were determined; and seasonal, inter- and intra- estuarine differences in the trophic relations among producers and consumers were identified. Stable isotope analysis was performed in different producers, primary consumers (main prey items for fish) and fish species (Solea solea, Solea senegalensis, Pomatoschistus microps, Dicentrarchus labrax, Liza ramada, Diplodus vulgaris and Atherina presbyter) of two areas in each estuary, in July and October 2009. Model calculations showed that the main prey for the fish species in the Tejo estuary used mostly salt marsh-derived organic matter as nutritional sources, with no marked differences between the sampled months. Trophic levels of fish species from the same estuary differed at multiple scales: inter-species, seasonally and spatially (both between and within estuaries). Significant differences in isotopic composition of fish species were more pronounced spatially (between the two sampled areas in the estuary) than seasonally (between sampled months). Trophic relationships in both estuaries demonstrated that organic matter is transferred to higher trophic positions mainly through benthic pathways. This shows the flexibility of these species to share resources and to exploit temporary peaks in prey populations. The present results showed that extensive disturbance in intertidal habitats from both estuaries may potentially change the balance of organic matter in the base of these complex food webs.

Short-term variability of fish condition and growth in estuarine and shallow coastal areas

Short-term variability in condition factor: relative condition factor Kn; biochemical condition: RNA:DNA and protein content; and instantaneous growth rates were determined in estuarine and coastal fish. Dicentrarchus labrax, Solea senegalensis and Pomatoschistus microps were sampled in the Tejo estuary, while Trachurus trachurus was sampled in an adjacent shallow coastal area. Variation of condition indices was more frequent at the week scale (sampling periods with fortnight intervals) than at the daily scale (consecutive days in each sampling period) in all species. Water temperature was correlated with biochemical indices, while salinity showed no effect, evidencing the influence of environmental short-term variation (temperature) on biochemical condition in natural populations. Yet, decreasing individual variability in fish condition was observed along the sampled weeks, resulting in a more homogeneous condition of populations, particularly for T. trachurus likely due to a more stable coastal environment. Biochemical indices proved to be sensitive to short-term environmental variability, despite species-specific responses.

Reconciling differences in natural tags to infer demographic and genetic connectivity in marine fish populations

Processes regulating population connectivity are complex, ranging from extrinsic environmental factors to intrinsic individual based features, and are a major force shaping the persistence of fish species and population responses to harvesting and environmental change. Here we developed an integrated assessment of demographic and genetic connectivity of European flounder Platichthys flesus in the northeast Atlantic (from the Norwegian to the Portuguese coast) and Baltic Sea. Specifically, we used a Bayesian infinite mixture model to infer the most likely number of natal sources of individuals based on otolith near core chemical composition. Simultaneously, we characterised genetic connectivity via microsatellite DNA markers, and evaluated how the combined use of natural tags informed individual movement and long-term population exchange rates. Individual markers provided different insights on movement, with otolith chemistry delineating Norwegian and Baltic Sea sources, whilst genetic markers showed a latitudinal pattern which distinguished southern peripheral populations along the Iberian coast. Overall, the integrated use of natural tags resulted in outcomes that were not readily anticipated by individual movement or gene flow markers alone. Our ecological and evolutionary approach provided a synergistic view on connectivity, which will be paramount to align biological and management units and safeguard species’ biocomplexity.

Extrinsic and intrinsic factors shape the ability of using otolith chemistry to characterize estuarine environmental histories

Reconstructing habitat use and environmental histories of fish via otolith chemistry relies on linking otolith chemical composition to the surrounding environment, as well as disentangling the consequences of ontogenetic or physiological effects that may mask environmental signals. We used multiple linear and linear mixed models to analyse the importance of environmental (temperature, salinity, water chemistry) and individual based (fish size) factors on otolith chemical composition and incorporation (Li, Mg, Mn, Sr, and Ba) of juvenile Dicentrarchus labrax, over their time within an estuarine nursery area. Multi model inference highlighted the importance of ontogeny, as well as the influence of temperature and salinity on otolith chemistry and elemental incorporation, with results indicating that intrinsic effects may potentially outweigh environmental effects. Ultimately, understanding if otolith chemistry accurately reflects fine-scale environmental variation is key to reconstruct environmental histories of juvenile fishes in estuaries and will contribute to determining the impact changing estuarine conditions may have on growth and survival.