Tajalli Keshavarz

Polyhydroxyalkanoates: bioplastics with a green agenda

Production of polyhydroxyalkanoates (PHAs) has been investigated for more than eighty years but recently a number of factors including increase in the price of crude oil and public awareness of the environmental issues have become a notable driving force for extended research on biopolymers. The versatility of PHAs has made them good candidates for the study of their potential in a variety of areas from biomedical/medical fields to food, packaging, textile and household material. While production costs are still a drawback to wider usage of these biopolymers, their application as low volume high cost items is becoming a reality. The future trend is to focus on the development of more efficient and economical processes for PHA production, isolation, purification and improvement of PHA material properties.

Elicitation of plants and microbial cell systems.

Plants show physiological and morphological responses to a range of physical and chemical factors known as ‘elicitors’. These responses have been considered as defence reactions ‘elicited’ by the plants’ biochemical factory to ensure their survival, persistence and competitiveness. Recently examples have been cited of elicitation in some fungal and bacterial cultures. Through a chronological survey, this Review considers examples of elicitors and elicitation and describes suggested mechanisms of elicitation in plants and microbial cell cultures. The majority of research in this field has been carried out on the plant systems using complex (undefined) biotic elicitors. Carbohydrates are the main class of compounds used as defined elicitors. This Review focuses on carbohydrates as compounds initiating a defence response in cell cultures. Physiological changes brought about on the plant and microbial cultures include expression of novel metabolites and overproduction of already known products. Recent reports confirming elicitation in microbial cultures are of potential importance, as the relative ease of fermentation and scale‐up could open an opportunity for the introduction of useful novel metabolites as well as enhancement of commercially useful bioproducts. In this context, a sound knowledge of the elicitor molecules’ structure–function relationships and mechanisms of elicitation is essential.

Microbial quorum sensing: a tool or a target for antimicrobial therapy?

Inter‐cell communication aided by released chemical signals when cell density reaches a critical concentration has been investigated for over 30 years as quorum sensing. Originally discovered in Gram‐negative bacteria, quorum‐sensing systems have also been studied extensively in Gram‐positive bacteria and dimorphic fungi. Microbial communities communicating via quorum sensing employ various chemical signals to supervise their surrounding environment, alter genetic expression and gain advantage over their competitors. These signals vary from acylhomoserine lactones to small modified or unmodified peptides to complex γ‐butyrolactone molecules. The scope of this review is to give an insight into some of the quorum‐sensing systems now known and to explore their role in microbial physiology and development of pathogenesis. Particular attention will be dedicated to the signalling molecules involved in quorum‐sensing‐mediated processes and the potential shown by some of their natural and synthetic analogues in the treatment of infections triggered by quorum sensing.

Effect of dissolved oxygen tension and ph on the production of extracellular protease from a new isolate of bacillus subtilis K2, for use in leather processing

Scale-up of production of an alkaline protease, previously characterised from a new isolate of Bacillus subtilis for use as a bating enzyme in leather processing, is described. Before large-scale commercial production of the protease is possible, characteristics of the growth of the bacterium and enzyme production in fermenters must be defined. In 2 dm3 fermenters an optimal specific activity of 296×103 U g −1 cell dry weight was obtained after 60 h with the dissolved oxygen tension (DOT) kept above 10% and pH left uncontrolled. Culture pH was 6 on inoculation, falling to 5.3 after 12 h before rising steadily to ∽8 at the end of fermentation. DOT was maintained above 10% by agitation in the range 300 to 500 rpm. The same criteria were adopted for scale-up to 20 dm3 but the increase in activity occurred 24 h later. © 1999 Society of Chemical Industry

Poly-3-hydroxyoctanoate P(3HO), a medium chain length polyhydroxyalkanoate homopolymer from Pseudomonas mendocina

Pseudomonas mendocina was found to produce a unique homopolymer of poly(3-hydroxyoctanoate), P(3HO), rather than a copolymer, when grown on sodium octanoate as the sole carbon source. Although this polymer has been produced by other organisms, interestingly this is the first time an absolute homopolymer has been produced by a wild type organism. In addition, a detailed study on the effects of different extraction methods on the yield, molecular weight, thermal properties, and lipopolysaccharide content of P(3HO) has been carried out. The organism was able to accumulate P(3HO) up to 31.38% of its dry cell weight within 48 h in mineral salt medium. Characterization of the monomer was carried out using FTIR, GC-MS, (13)C, (1)H, and HSQC NMR spectroscopy. The polymer had a crystallinity of 37.5%, Youngs modulus value of 11.6 MPa and contact angle of 77.3°. Microstructural studies of solvent cast polymer films revealed a smooth surface topography with a root-mean-square roughness value of 0.238 μm.

Enhancement of glucose oxidase production by Penicillium variabile P16

Effects of the polysaccharides alginate and locust bean gum, and oligosaccharides oligomannuronate (OM) and oligoguluronate (OG), on glucose oxidase (GOD) production by Penicillium variabile P16 were studied. Small increases were observed when the cultures were supplemented with OG and OM blocks with an average degree of polymerization (DP) of approximately ten. With 200 mg l−1 OM blocks addition at 0 h, the increase reached 32.1% compared with the control; however, regardless of the time of addition, large increases (up to approximately 70%) in GOD production were obtained with 100 and, particularly, 200 mg l−1 of alginate-derived oligosaccharides (OG and/or OM blocks) with a DP of approximately seven. No significant influence was observed on mycelial biomass.

The effect of salinity, redox mediators and temperature on anaerobic biodegradation of petroleum hydrocarbons in microbial fuel cells

Microbial fuel cells (MFCs) need to be robust if they are to be applied in the field for bioremediation. This study investigated the effect of temperature (20-50°C), salinity (0.5-2.5% (w/v) as sodium chloride), the use of redox mediators (riboflavin and anthraquinone-2-sulphonate, AQS) and prolonged fed-batch operation (60 days) on biodegradation of a petroleum hydrocarbon mix (i.e. phenanthrene and benzene) in MFCs. The performance criteria were degradation efficiency, % COD removal and electrochemical performance. Good electrochemical and degradation performance were maintained up to a salinity of 1.5% (w/v) but deteriorated by 35-fold and 4-fold respectively as salinity was raised to 2.5%w/v. Degradation rates and maximum power density were both improved by approximately 2-fold at 40°C compared to MFC performance at 30°C but decreased sharply by 4-fold when operating temperature was raised to 50°C. The optimum reactor performance obtained at 40°C was 1.15 mW/m(2) maximum power density, 89.1% COD removal and a degradation efficiency of 97.10%; at moderately saline (1% w/v) conditions the maximum power density was 1.06 mW/m(2), 79.1% COD removal and 91.6% degradation efficiency. This work suggests the possible application of MFC technology in the effective treatment of petroleum hydrocarbons contaminated site and refinery effluents.

Controlled Delivery of Gentamicin Using Poly(3-hydroxybutyrate) Microspheres

Poly(3-hydroxybutyrate), P(3HB), produced from Bacillus cereus SPV using a simple glucose feeding strategy was used to fabricate P(3HB) microspheres using a solid-in-oil-water (s/o/w) technique. For this study, several parameters such as polymer concentration, surfactant and stirring rates were varied in order to determine their effect on microsphere characteristics. The average size of the microspheres was in the range of 2 μm to 1.54 μm with specific surface areas varying between 9.60 m2/g and 6.05 m2/g. Low stirring speed of 300 rpm produced slightly larger microspheres when compared to the smaller microspheres produced when the stirring velocity was increased to 800 rpm. The surface morphology of the microspheres after solvent evaporation appeared smooth when observed under SEM. Gentamicin was encapsulated within these P(3HB) microspheres and the release kinetics from the microspheres exhibiting the highest encapsulation efficiency, which was 48%, was investigated. The in vitro release of gentamicin was bimodal, an initial burst release was observed followed by a diffusion mediated sustained release. Biodegradable P(3HB) microspheres developed in this research has shown high potential to be used in various biomedical applications.

Transformation of high concentrations of chlorophenols by the white-rot basidiomycete Trametes versicolor immobilized on nylon mesh

Free-cell cultures of Trametes versicolor were compared with cultures immobilized on nylon mesh in a 2-litre bioreactor for transformation of pentachlorophenol (PCP) and 2,4-dichlorophenol (2,4-DCP), added at intervals to the liquid culture medium over a period of 816 hrs. Increasing amounts of PCP from 200 ppm to 2000 ppm added batchwise to cultures permitted acclimatization of the fungus to these toxic pollutants. A total addition of 2000 ppm of 2,4-DCP and 3400 ppm PCP were removed from the immobilized cultures with 85% of 2,4-DCP and 70% of PCP transformed by enzymes (laccase and Mn-peroxidase), 5% 2,4-DCP and 28% PCP adsorbed by the biomass and 10% 2,4-DCP and 2% PCP retained in the medium at the termination of the fermentation after 1020 hrs. In contrast free-cell cultures in the same medium with the same addition regime of PCP and 2,4-DCP, transformed 20% 2,4-DCP and 12% PCP by enzyme action, adsorbed 58% 2,4-DCP and 80% PCP by the biomass, and retained 22% 2,4-DCP and 8% PCP in the medium. The use of nylon mesh as an immobilization matrix for removal of PCP and 2,4-DCP facilitates more efficient removal of chlorophenols and can be adapted to scale-up for application of large volumes of chlorophenol-containing aqueous effluents.

Simultaneous co-metabolic decolourisation of azo dye mixtures and bio-electricity generation under thermophillic (50 °C) and saline conditions by an adapted anaerobic mixed culture in microbial fuel cells

In this study, azo dye adapted mixed microbial consortium was used to effectively remove colour from azo dye mixtures and to simultaneously generate bio-electricity using microbial fuel cells (MFCs). Operating temperature (20-50 °C) and salinity (0.5-2.5%w/v) were varied during experiments. Reactor operation at 50 °C improved dye decolourisation and COD removal kinetic constants by approximately 2-fold compared to the kinetic constants at 30 °C. Decolourisation and COD removal kinetic constants remained high (0.28 h(-1) and 0.064 h(-1) respectively) at moderate salinity (1%w/v) but deteriorated approximately 4-fold when the salinity was raised to 2.5% (w/v). Molecular phylogenetic analysis of microbial cultures used in the study indicated that both un-acclimated and dye acclimated cultures from MFCs were predominantly comprised of Firmicutes bacteria. This study demonstrates the possibility of using adapted microbial consortia in MFCs for achieving efficient bio-decolourisation of complex azo dye mixtures and concomitant bio-electricity generation under industrially relevant conditions.